BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0289300 Os08g0289300|J065129I07
(348 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G16390.1 | chr2:7097638-7101182 FORWARD LENGTH=889 298 3e-81
AT2G21450.1 | chr2:9179622-9182356 REVERSE LENGTH=817 270 8e-73
AT3G42670.1 | chr3:14755906-14760085 REVERSE LENGTH=1257 117 8e-27
AT5G20420.1 | chr5:6899015-6903266 REVERSE LENGTH=1262 117 1e-26
AT3G32330.1 | chr3:13276082-13277155 FORWARD LENGTH=328 110 1e-24
AT3G32280.1 | chr3:13233832-13240154 FORWARD LENGTH=475 107 9e-24
AT3G24340.1 | chr3:8832085-8835722 REVERSE LENGTH=1133 105 3e-23
AT1G05490.1 | chr1:1618795-1623195 REVERSE LENGTH=1411 103 1e-22
AT1G08600.3 | chr1:2724562-2733431 FORWARD LENGTH=1480 89 4e-18
AT3G31900.1 | chr3:12875071-12877422 FORWARD LENGTH=394 80 1e-15
AT3G19210.1 | chr3:6652799-6658876 REVERSE LENGTH=911 61 8e-10
>AT2G16390.1 | chr2:7097638-7101182 FORWARD LENGTH=889
Length = 888
Score = 298 bits (763), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 196/297 (65%), Gaps = 12/297 (4%)
Query: 15 IEEEKPVKESEG----LEDLWKDFSLAAECTKLDTNEDMSXXXXXXXXXXXXXXXXXXIR 70
+EE+ ESE L ++W + +L+ EC+K D++
Sbjct: 221 VEEDDSDNESEAADEDLGNIWNEMALSIECSK-----DVARETSHKEKADVVEDCEHSFI 275
Query: 71 IHEDLGHVCRICGMIVRKAETIIDYQWKKASR-TRTNYYESRSKDADEIDTGAVKVSEDF 129
+ +D+G+VCR+CG+I + IID Q+ KA R TRT E+R+K E D E
Sbjct: 276 LKDDMGYVCRVCGVIEKSILEIIDVQFTKAKRNTRTYASETRTKRFGESDNELKFSEEGL 335
Query: 130 IVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFL 189
++ +A HP HA +M+PHQ+EGF FL NLV D PGGCI+AHAPGSGKTFM+ISF+QSFL
Sbjct: 336 MIGGLAAHPTHAAEMKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFL 395
Query: 190 AKYPSARPLVVLPKGIGSTWKREFQWWQVEDIPLYDFYSVKADKRVEQLEVLKYWEAQMS 249
AKYP A+PLVVLPKGI TWK+EF WQVEDIPL DFYS KA+ R +QL +LK W + S
Sbjct: 396 AKYPQAKPLVVLPKGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKS 455
Query: 250 ILFLGYKQFSRIICGDGDGNIAAACWDRLLMVPNLLILDEGHTPRNRETDVLASLKR 306
ILFLGY+QFS I+C D ++ +C + LL VP++LILDEGHTPRN +T++L SL +
Sbjct: 456 ILFLGYQQFSTIVCDDTTDSL--SCQEILLKVPSILILDEGHTPRNEDTNLLQSLAQ 510
>AT2G21450.1 | chr2:9179622-9182356 REVERSE LENGTH=817
Length = 816
Score = 270 bits (690), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 183/303 (60%), Gaps = 16/303 (5%)
Query: 5 DVPSQSYRTMIEEEKPVKESEGLEDLWKDFSLAAECTKLDTNEDMSXXXXXXXXXXXXXX 64
D+ +QS EEE E+LW+ + A E K+ + S
Sbjct: 140 DIDNQSLYVDAEEE---------EELWRKMAFAQESIKVTVEDSQSNDHKQIEDCDHSFI 190
Query: 65 XXXXIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDTGAVK 124
+D+G VCR+CG+I + E++I+ + K R+R Y + D ++
Sbjct: 191 ------CKDDIGEVCRVCGLIKKPIESMIEVVFNKQKRSRRTYMREKENGETSRDFSGIQ 244
Query: 125 VSEDFIVSD-IAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLIS 183
S I+ + + IHP H ++MRPHQ EGF FL NL D+PGGCILAHAPGSGKTF+LIS
Sbjct: 245 SSHTNILGEKMFIHPWHDQEMRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLIS 304
Query: 184 FIQSFLAKYPSARPLVVLPKGIGSTWKREFQWWQVEDIPLYDFYSVKADKRVEQLEVLKY 243
F+QSF+A P ARPLVVLPKGI +WKREF W+VE IPL DFYSVKA+ R +QL+VL
Sbjct: 305 FLQSFMAMDPQARPLVVLPKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQ 364
Query: 244 WEAQMSILFLGYKQFSRIICGDGDGNIAAACWDRLLMVPNLLILDEGHTPRNRETDVLAS 303
W + SILFLGY+QF+RIIC D + C LL P LLILDEGHT RN+ET +L+S
Sbjct: 365 WIKERSILFLGYQQFTRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSS 424
Query: 304 LKR 306
L R
Sbjct: 425 LAR 427
>AT3G42670.1 | chr3:14755906-14760085 REVERSE LENGTH=1257
Length = 1256
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 145/316 (45%), Gaps = 63/316 (19%)
Query: 71 IHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDTGAVKVSEDFI 130
++E++G CR+CG + + + + A R + + +K +E D V++D +
Sbjct: 587 LNEEIGMCCRLCGHVGTEIKHV------SAPFARHKKWTTETKQINEDDINTTIVNQDGV 640
Query: 131 VSDI--------------------AIHPRHAKQMRPHQLEGFSFLVKNLVG--------- 161
S ++ P+ +++ HQ + F FL KNL G
Sbjct: 641 ESHTFTIPVASSDMPSAEESDNVWSLIPQLKRKLHLHQKKAFEFLWKNLAGSVVPAMMDP 700
Query: 162 --DKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGIGSTWKREFQWWQVE 219
DK GGC+++H PG+GKTF++I+F+ S+L +P RPLV+ PK TW +EF W++
Sbjct: 701 SSDKIGGCVVSHTPGAGKTFLIIAFLASYLKIFPGKRPLVLAPKTTLYTWYKEFIKWEIP 760
Query: 220 DIPLYDF-----YSVKADKRVE----------------QLEVLKYWEAQMSILFLGYKQF 258
+P++ Y + +K ++ L+ ++ W AQ S+L +GY F
Sbjct: 761 -VPVHLLHGRRTYCMSKEKTIQFEGIPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSF 819
Query: 259 SRIICGDGDGNIAAACWDRLLMVPNLLILDEGHTPRNRETDVLASLKRHHAKWSCLVHFS 318
++ D L P LL+LDEGH PR+ ++ + +L + L+ S
Sbjct: 820 LTLMREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILL--S 877
Query: 319 RTTFRKCLTSW--TLC 332
T F+ + TLC
Sbjct: 878 GTLFQNNFCEYFNTLC 893
>AT5G20420.1 | chr5:6899015-6903266 REVERSE LENGTH=1262
Length = 1261
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 151/311 (48%), Gaps = 51/311 (16%)
Query: 70 RIHEDLGHVCRICGMIVRKAETII-----DYQWKKASR--------TRTNYYESRSKDAD 116
R+ E++G CR+CG + + + + +W ++ T+ ++ E+++KD
Sbjct: 592 RLEEEIGMCCRLCGHVGSEIKDVSAPFAEHKKWTIETKHIEEDDIKTKLSHKEAQTKDFS 651
Query: 117 EIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGD-KP----------G 165
I + ++ + + A+ P+ +++ HQ F FL +N+ G +P G
Sbjct: 652 MISDSSEMLAAEESDNVWALIPKLKRKLHVHQRRAFEFLWRNVAGSVEPSLMDPTSGNIG 711
Query: 166 GCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGIGSTWKREFQWWQVEDIPLY- 224
GC+++H+PG+GKTF++I+F+ S+L +P RPLV+ PK TW +EF W++ +P++
Sbjct: 712 GCVISHSPGAGKTFLIIAFLTSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIP-VPVHL 770
Query: 225 -----DFYSVKADKRVE----------------QLEVLKYWEAQMSILFLGYKQFSRIIC 263
+ + K +K V+ LE ++ W A S+L +GY F+ ++
Sbjct: 771 IHGRRTYCTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTTLMR 830
Query: 264 GDGDGNIAAACWDRLLMVPNLLILDEGHTPRNRETDVLASLKRHHAKWSCLVHFSRTTFR 323
D L P LL+LDEGH PR+ ++ + +L + L+ S T F+
Sbjct: 831 EDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILL--SGTLFQ 888
Query: 324 KCLTSW--TLC 332
+ TLC
Sbjct: 889 NNFCEYFNTLC 899
>AT3G32330.1 | chr3:13276082-13277155 FORWARD LENGTH=328
Length = 327
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 93/185 (50%), Gaps = 31/185 (16%)
Query: 123 VKVSED-FIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFML 181
++V +D F + I HP H M+PH E +FL KNLV + GCI+A P S KTF++
Sbjct: 1 MRVPKDGFSGTGIFPHPFHKMIMKPHHFEILNFLYKNLVVENSNGCIIAQTPLSEKTFLM 60
Query: 182 ISFIQSFLAKYPSARPLVVLPKGIGSTWKREFQWWQVEDIPLYDFYSVKADKRVEQLEVL 241
ISFI +L K+P+++ L VLPK W V LEVL
Sbjct: 61 ISFIYGYLEKHPNSKSLFVLPK-----W-------------------------VLNLEVL 90
Query: 242 KYWEAQMSILFLGYKQFSRIICGDGDGNIAAACWDRLLMVPNLLILDEGHTPRNRETDVL 301
K W SI+FLG KQFS I+ + + +C D LL + ++++ D G PRN L
Sbjct: 91 KRWIKTWSIIFLGAKQFSNIVSDNSGAEASDSCRDILLNILSVVVFDRGTDPRNEMMSFL 150
Query: 302 ASLKR 306
+ R
Sbjct: 151 KVVSR 155
>AT3G32280.1 | chr3:13233832-13240154 FORWARD LENGTH=475
Length = 474
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 105/235 (44%), Gaps = 51/235 (21%)
Query: 73 EDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDTGAVKVSED-FIV 131
+ LGH C ICG+I K + + KD ++V +D F
Sbjct: 258 QGLGHTCWICGII------------DKDHPLPPGFGSNICKDI------KMRVPKDGFSG 299
Query: 132 SDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAK 191
+ I HP H M+PH E +FL KNLV + GCI+A P S KTF++ISFI +L K
Sbjct: 300 TGIFPHPLHRMIMKPHHFEILNFLYKNLVVENSNGCIIAQTPLSEKTFLMISFIYGYLEK 359
Query: 192 YPSARPLVVLPKGIGSTWKREFQWWQVEDIPLYDFYSVKADKRVEQLEVLKYWEAQMSIL 251
+P+++ L VLPK + L LK W SI+
Sbjct: 360 HPNSKSLFVLPKWV--------------------------------LNGLKRWIKTRSII 387
Query: 252 FLGYKQFSRIICGDGDGNIAAACWDRLLMVPNLLILDEGHTPRNRETDVLASLKR 306
FLG KQFS I+ + + +C D LL + ++++ D G PRN L + R
Sbjct: 388 FLGAKQFSNIVSDNSGAEASDSCRDILLNILSVVVFDRGTDPRNEMMCFLKVVSR 442
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 143 QMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFI 185
+ PH +E +FL NLV + P GCILA A G KT+++I+FI
Sbjct: 63 SLDPHHIEILNFLCNNLVVENPNGCILAQARGPEKTYLMINFI 105
>AT3G24340.1 | chr3:8832085-8835722 REVERSE LENGTH=1133
Length = 1132
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 32/184 (17%)
Query: 144 MRPHQLEGFSFLVKNLVGDK------------PGGCILAHAPGSGKTFMLISFIQSFLAK 191
+ PHQ EGF F+ KNL G GGCI++H G+GKT + + F+QS+L +
Sbjct: 577 LYPHQQEGFEFIWKNLAGTTKINELNSVGVKGSGGCIISHKAGTGKTRLTVVFLQSYLKR 636
Query: 192 YPSARPLVVLPKGIGSTWKREFQWWQVEDIPLYDFYSVK--------ADKRVE------- 236
+P++ P+V+ P + TW+ E + W V +IP Y+ S++ A R+E
Sbjct: 637 FPNSHPMVIAPATLMRTWEDEVRKWNV-NIPFYNMNSLQLSGYEDAEAVSRLEGNRHHNS 695
Query: 237 -QLEVLKYWEAQMSILFLGYKQFSRIICGDGDGNIAAACWDRLLM-VPNLLILDEGHTPR 294
++ L W Q SIL + Y + ++ + + R+L+ +P LL+LDEGHTPR
Sbjct: 696 IRMVKLVSWWKQKSILGISYPLYEKLAANKNTEGMQV--FRRMLVELPGLLVLDEGHTPR 753
Query: 295 NRET 298
N+ +
Sbjct: 754 NQSS 757
>AT1G05490.1 | chr1:1618795-1623195 REVERSE LENGTH=1411
Length = 1410
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 60/306 (19%)
Query: 74 DLGHVCRICGMIVRKAETIIDYQW-KKASRTRTNYYESRSKDADEI------DTGAVKVS 126
++G C CG + R+ ++ +W +K +R R + ++ D ++
Sbjct: 743 EVGLKCMHCGFVEREIRSMDVSEWGEKTTRERRKFDRFEEEEGSSFIGKLGFDAPNNSLN 802
Query: 127 EDFIVSDIAI---HPRHAKQMRPHQLEGFSFLVKNLVG-------------DKPGGCILA 170
E + S+ + P QM PHQ EGF F+ KNL G D+ GGCI++
Sbjct: 803 EGCVSSEGTVWDKIPGVKSQMYPHQQEGFEFIWKNLAGTIMLNELKDFENSDETGGCIMS 862
Query: 171 HAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGIGSTWKREFQWWQVEDIPLYDFYSV- 229
HAPG+GKT + I F+Q++L +P +P+++ P + TW EF+ W + IP ++ S+
Sbjct: 863 HAPGTGKTRLTIIFLQAYLQCFPDCKPVIIAPASLLLTWAEEFKKWNI-SIPFHNLSSLD 921
Query: 230 --------------------KADKRVEQLEVLKYWEAQMSILFLGYKQFSRII-CGDGDG 268
+++ + +++ W SIL + Y + ++ D D
Sbjct: 922 FTGKENSAALGLLMQKNATARSNNEIRMVKIYS-WIKSKSILGISYNLYEKLAGVKDEDK 980
Query: 269 NIAAA-----------CWDRLLMVPNLLILDEGHTPRNRETDVLASLKRHHAKWSCLVHF 317
+ L+ P LL+LDE HTPRN+ + + +L + + L
Sbjct: 981 KTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRIL--L 1038
Query: 318 SRTTFR 323
S T F+
Sbjct: 1039 SGTPFQ 1044
>AT1G08600.3 | chr1:2724562-2733431 FORWARD LENGTH=1480
Length = 1479
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 138 PRH-AKQMRPHQLEGFSFLVKNLV--------GDKPGGCILAHAPGSGKTFMLISFIQSF 188
PR + +++ HQ+ G F+ +N++ GDK GCILAH G GKTF +I+F+ +
Sbjct: 712 PRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTA 771
Query: 189 L--AKYPSARPLVVLPKGIGSTWKREFQWWQVEDIPLYDFYSVKADKRVEQLEVLKYWEA 246
+ L+V P + W+ EF+ W ++ + + R + ++L W
Sbjct: 772 MRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRK 831
Query: 247 QMSILFLGYKQFSRIICGDG--DGNIAAACWDRLLMVPNLLILDEGHTPRNRETDVLASL 304
+ + +GY F + G G D N A + L P++L+ DE H +N + D +L
Sbjct: 832 KGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQAL 891
Query: 305 KR----------------HHAKWSCLVHFSRTTF 322
K+ + ++ C+V F R F
Sbjct: 892 KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 925
>AT3G31900.1 | chr3:12875071-12877422 FORWARD LENGTH=394
Length = 393
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 127 EDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQ 186
+ F + I HP H M+PH E +FL KNLV + GCI+ P S KTF++ISFI
Sbjct: 196 DSFSGTGIFPHPLHKMIMKPHHFEILNFLCKNLVVENSNGCIIDQTPLSEKTFLMISFI- 254
Query: 187 SFLAKYPSARPLVVLPKGIGSTWKREFQWWQVEDIPLYDFYSVKADKRVEQLEVLKYWEA 246
Y L +++F +V D+ L DFYS KA
Sbjct: 255 -----YVGVERL-----------EKKFGELKVNDLVLLDFYSTKA--------------- 283
Query: 247 QMSILFLGYKQFSRIICGDGDGNIAAACWDRLLMVPNLLILDEGHTPRNRETDVLASLKR 306
KQFS I+ + + +C D LL + ++++ G PRN L + R
Sbjct: 284 -------SAKQFSNIVSDNSGAEASDSCRDILLNILSVVVFGRGTDPRNEMMSFLKVVSR 336
>AT3G19210.1 | chr3:6652799-6658876 REVERSE LENGTH=911
Length = 910
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 80/189 (42%), Gaps = 29/189 (15%)
Query: 131 VSDIAIHPRHAKQMRPHQLEGFSFL---VKNLVGDKP-GGCILAHAPGSGKTFMLISFIQ 186
V+ I +H K +RPHQ EG F+ V L G GCILA G GKT I+ +
Sbjct: 167 VTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLY 226
Query: 187 SFLAKYPSARPLV-----VLPKGIGSTWKREFQWWQVEDIPLYDFYSVKADKRVEQLEVL 241
+ L + P+V V P + S W+ E + W + I L D + ++
Sbjct: 227 TLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSF 286
Query: 242 KYWEAQMSILFLGYKQF---SRIICGDGDGNIAAACWDRLLMVPNLLILDEGHTPRNRET 298
+ + +L + Y+ F S C + +C +LLI DE H +N +T
Sbjct: 287 TRPRSALQVLIISYETFRMHSSKFCQ------SESC--------DLLICDEAHRLKNDQT 332
Query: 299 ---DVLASL 304
LASL
Sbjct: 333 LTNRALASL 341
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,732,274
Number of extensions: 312921
Number of successful extensions: 763
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 752
Number of HSP's successfully gapped: 13
Length of query: 348
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 249
Effective length of database: 8,392,385
Effective search space: 2089703865
Effective search space used: 2089703865
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)