BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0263600 Os08g0263600|Os08g0263600
(503 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38180.1 | chr4:17906702-17909404 REVERSE LENGTH=789 99 6e-21
AT5G28530.1 | chr5:10525078-10527300 REVERSE LENGTH=686 67 2e-11
AT1G10240.1 | chr1:3356835-3359271 REVERSE LENGTH=681 67 3e-11
AT4G15090.1 | chr4:8614806-8617870 FORWARD LENGTH=828 59 6e-09
AT3G59470.1 | chr3:21979099-21980097 REVERSE LENGTH=252 58 1e-08
AT1G52520.1 | chr1:19565933-19568248 FORWARD LENGTH=704 52 6e-07
AT1G76320.1 | chr1:28631404-28633886 FORWARD LENGTH=733 52 7e-07
AT5G18960.1 | chr5:6330556-6333071 FORWARD LENGTH=789 50 3e-06
AT4G12850.1 | chr4:7537068-7538276 FORWARD LENGTH=184 50 3e-06
AT1G80010.1 | chr1:30097565-30099846 FORWARD LENGTH=726 50 3e-06
AT3G06250.1 | chr3:1889771-1892065 REVERSE LENGTH=765 50 4e-06
AT2G32250.1 | chr2:13693518-13696783 FORWARD LENGTH=808 49 4e-06
AT3G22170.1 | chr3:7822359-7825414 REVERSE LENGTH=840 49 5e-06
>AT4G38180.1 | chr4:17906702-17909404 REVERSE LENGTH=789
Length = 788
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 120/233 (51%), Gaps = 15/233 (6%)
Query: 6 DDEIAIPLS--DDDERFNTPKKKPSIPL--NCSSFTPDCDEE------ITPAVGMKFEDI 55
DD I I DDD+ ++P L N ++ P+ +EE + P G++FE
Sbjct: 23 DDAIDIEHHALDDDDMLDSPIMPCGNGLVGNSGNYFPNQEEEACDLLDLEPYDGLEFESE 82
Query: 56 EAVEKFYKSYVHTVGFSVRIGQQKKL---NEVVQCKCFMCSRQGWKSKKGNEISDPSKKR 112
EA + FY SY +GFS R+ ++ ++Q + F+C+++G+++ D KR
Sbjct: 83 EAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQ-RQFVCAKEGFRNMNEKRTKDREIKR 141
Query: 113 RKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTL 172
+ TR GC A + VK+ K+ ++ V+ H+H LV PD++H +RS+R++S AK +
Sbjct: 142 PRTI-TRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHRQISGPAKTLI 200
Query: 173 FTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKMKNADAEML 225
T A +G + L GG VG T+ D +NY R+ R K + ++L
Sbjct: 201 DTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSIEGEIQLL 253
>AT5G28530.1 | chr5:10525078-10527300 REVERSE LENGTH=686
Length = 685
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 14/229 (6%)
Query: 15 DDDERFNTPKKKPSIPLNCSSFTPDCDEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVR 74
++DE T + S P S + D TP VG F + ++Y ++ GFS+R
Sbjct: 28 EEDESTITKSEIESTPTPTSQY----DTVFTPYVGQIFTTDDEAFEYYSTFARKSGFSIR 83
Query: 75 IGQQ-KKLNEVVQCKCFMCSRQGW-KSKKGNEISDPSKKRRKLKETRCGCDAHIFV-KLC 131
+ + N V + F+C R G+ + +K + P R+ K RCGCD +++ K
Sbjct: 84 KARSTESQNLGVYRRDFVCYRSGFNQPRKKANVEHP----RERKSVRCGCDGKLYLTKEV 139
Query: 132 SD--NKYHIASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTSHRASVGTSQAYRLL 189
D + ++++ H+H L+ D++ L+ + R++ + + + +A ++ +LL
Sbjct: 140 VDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYRKIQQSDQERILLLSKAGFPVNRIVKLL 199
Query: 190 HVSDGGFE-NVGCTKRDLQNYYRDLRTKMKNADAEMLENVYNDYGNLLE 237
+ G + ++D++N+ R + ++ DA M E +D LLE
Sbjct: 200 ELEKGVVSGQLPFIEKDVRNFVRACKKSVQENDAFMTEKRESDTLELLE 248
>AT1G10240.1 | chr1:3356835-3359271 REVERSE LENGTH=681
Length = 680
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 140/313 (44%), Gaps = 41/313 (13%)
Query: 5 SDDEIAIPLSDDDERFNTPKKKPSIPLNCSSFT---PDCDEEIT--------PAVGMKFE 53
SDD + L DD P + S+ L+ +S T PD D ++ P +G F
Sbjct: 2 SDDPGQMLLIYDD-----PSDQRSLSLDDASSTEESPD-DNNLSLEAVHNAIPYLGQIFL 55
Query: 54 DIEAVEKFYKSYVHTVGFSVRIGQQKKLNEV---VQCKCFMCSRQGWKSKKGNEISDPSK 110
+ +FY ++ GFS+R + + + V + + F+C R G K P +
Sbjct: 56 THDTAYEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKPQR 115
Query: 111 KRRKLKETRCGCDAHIFVKLCSD---NKYHIASLVEHHSHGLVSPDKLHLMRSNREVSER 167
RR +RCGC A++ + ++ ++ + HH+H L+ P+++ + + R +S+
Sbjct: 116 NRRS---SRCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYRSISDA 172
Query: 168 AKNTLFTSHRASVGTSQAYRLLHVS---DGGFENVGCTKRDLQNY---YRDLRTKMKNAD 221
K+ + + + Q RLL + + GF + T++D++N ++ L + +N D
Sbjct: 173 DKSRILMFSKTGISVQQMMRLLELEKCVEPGF--LPFTEKDVRNLLQSFKKLDPEDENID 230
Query: 222 -AEMLENVYNDYGNLLEEIAIDSSEMAVRKKISAACNKFEDLIQKAKHSAEAIDFLTSSV 280
M +++ N E +D+++ K+ + IQ + +A+ F T+
Sbjct: 231 FLRMCQSIKEKDPNFKFEFTLDAND-----KLENIAWSYASSIQSYELFGDAVVFDTTHR 285
Query: 281 LS-LEAPLDQMVA 292
LS +E PL V
Sbjct: 286 LSAVEMPLGIWVG 298
>AT4G15090.1 | chr4:8614806-8617870 FORWARD LENGTH=828
Length = 827
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 36 FTPDCDEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIG---QQKKLNEVVQCKCFMC 92
F+ D D E P G+ F+ EA FY+ Y ++GF+ I + KK + + K F C
Sbjct: 43 FSGDLDLE--PRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAK-FAC 99
Query: 93 SRQGWKSKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSP 152
SR G +E S S +R +K+T C H VK D K+ I V+ H+H L+
Sbjct: 100 SRYG--VTPESESSGSSSRRSTVKKTDCKASMH--VKRRPDGKWIIHEFVKDHNHELLPA 155
Query: 153 DKLHLMRSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVG 200
H R R V KN + H S T + Y + GG++N+G
Sbjct: 156 LAYHF-RIQRNVKLAEKNNIDILHAVSERTKKMYVEMSRQSGGYKNIG 202
>AT3G59470.1 | chr3:21979099-21980097 REVERSE LENGTH=252
Length = 251
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 28 SIPLNCSSFTPDCDEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQ--QKKLNEVV 85
SIPL + T +E P VG +FE A FY +Y VGF +R+ + + + +
Sbjct: 54 SIPLAVADMTEAQGDE--PYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSP 111
Query: 86 QCKCFMCSRQGWKSKKGNEISDPSKKRRKLK---ETRCGCDAHIFVKLCSDNKYHIASLV 142
+ +C+++G++ PSK+ + ++ ETR GC A I ++ + K+ I V
Sbjct: 112 IGRQLVCNKEGYRL--------PSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFV 163
Query: 143 EHHSHGLV 150
+ H+H L+
Sbjct: 164 KEHNHSLM 171
>AT1G52520.1 | chr1:19565933-19568248 FORWARD LENGTH=704
Length = 703
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 5 SDDEIAIPLSDDDERFNTPKKKPSIPLNCSSFTPDCDEEITPAVGMKFEDIEAVEKFYKS 64
S+ EI + ++ER + + + E PAVGM+FE + +Y
Sbjct: 44 SEHEIDVGFCQNEERKSEEETMGGFDEQSGLLVDERKEFDAPAVGMEFESYDDAYNYYNC 103
Query: 65 YVHTVGFSVRIGQQ--KKLNEVVQCKCFMCSRQGWKSKKGNEISDPSKKRRKLKETRCGC 122
Y VGF VR+ K+ ++ CS QG+K I+D ++ R KETR GC
Sbjct: 104 YASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGFK-----RINDVNRVR---KETRTGC 155
Query: 123 DAHIFVKLCSDNKYHIASLVEHHSHGL 149
A I ++ ++ + + H+H L
Sbjct: 156 PAMIRMRQVDSKRWRVVEVTLDHNHLL 182
>AT1G76320.1 | chr1:28631404-28633886 FORWARD LENGTH=733
Length = 732
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 109/279 (39%), Gaps = 50/279 (17%)
Query: 50 MKFEDIEAVEKFYKSYVHTVGFS---VRIGQQKKLNEVVQCKCFMCSRQGWKSKKGNEIS 106
M+FE E FYK Y +VGF + + + E + K F C R G K + + I+
Sbjct: 1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAK-FSCIRYGSKQQSDDAIN 59
Query: 107 DPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVS- 165
+ + GC A + VK D K+++ S V+ H+H L+ P++ H RS+R
Sbjct: 60 PRAS-------PKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL-PEQAHYFRSHRNTEL 111
Query: 166 --------ERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKM 217
R KNT T + AY L DG N R R +
Sbjct: 112 VKSNDSRLRRKKNTPLTDCKH----LSAYHDLDFIDGYMRNQHDKGR---------RLVL 158
Query: 218 KNADAEMLENVYNDYGNLLEE-----IAIDSSEMAVRKKISAACNKFEDLIQKAKHSAEA 272
DAE+L + EE A+D SE + + + K I+ K ++
Sbjct: 159 DTGDAEILLEF---LMRMQEENPKFFFAVDFSEDHLLRNVFWVDAK---GIEDYKSFSDV 212
Query: 273 IDFLTSSVLS-LEAPLDQMVAGGRQTRQEEFESFLGCNI 310
+ F TS +S + PL V + LGC +
Sbjct: 213 VSFETSYFVSKYKVPLVLFVGVNHHVQ----PVLLGCGL 247
>AT5G18960.1 | chr5:6330556-6333071 FORWARD LENGTH=789
Length = 788
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 25/138 (18%)
Query: 20 FNTPKKKPSIPLNCSSFTPDCDEE------ITPAVGMKFEDIEAVEKFYKSYVHTVGFSV 73
FN K S P+ E+ + P VG++F+ E +FY +Y GF V
Sbjct: 11 FNNMVAKSSYPVRILHHNNGISEDEEGGSGVEPYVGLEFDTAEEAREFYNAYAARTGFKV 70
Query: 74 RIGQ--QKKLNEVVQCKCFMCSRQGWKSKKGNEISDPSKKRRKLKETRCGCDAHIFVKLC 131
R GQ + + + V + F+CS++G++ +R GC A I V+
Sbjct: 71 RTGQLYRSRTDGTVSSRRFVCSKEGFQLN-----------------SRTGCTAFIRVQRR 113
Query: 132 SDNKYHIASLVEHHSHGL 149
K+ + + + H+H L
Sbjct: 114 DTGKWVLDQIQKEHNHEL 131
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 46 PAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQ--QKKLNEVVQCKCFMCSRQGWKSKKGN 103
P G++F +FY++Y VGF VRIGQ + K++ + + F+CSR+G++
Sbjct: 211 PYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQH---- 266
Query: 104 EISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGL 149
PS R GC A++ +K + + L + H+H L
Sbjct: 267 ----PS---------RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 299
>AT4G12850.1 | chr4:7537068-7538276 FORWARD LENGTH=184
Length = 183
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 46 PAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKK--LNEVVQCKCFMCSRQGWKSKKGN 103
P VG+KFE E + FY Y +GF VR+ Q+++ ++ + C++QG+
Sbjct: 10 PYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGF------ 63
Query: 104 EISDPSKKR--RKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGL 149
P+ +R +R GC A I VK+ K+ + ++ H+H L
Sbjct: 64 ---GPNNQRSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSL 108
>AT1G80010.1 | chr1:30097565-30099846 FORWARD LENGTH=726
Length = 725
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 21/118 (17%)
Query: 46 PAVGMKFEDIEAVEKFYKSYVHTVGFSVRI-------GQQKKLNEVVQCKCFMCSRQGWK 98
P GM+FE + FY SY +GF++R+ ++K V+ C C QG+K
Sbjct: 95 PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNC-----QGFK 149
Query: 99 SKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLH 156
K D +R KETR GC A I ++L +++ + + H+H P + H
Sbjct: 150 LLK-----DAHSRR---KETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSF-DPQRAH 198
>AT3G06250.1 | chr3:1889771-1892065 REVERSE LENGTH=765
Length = 764
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 41 DEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQ--QKKLNEVVQCKCFMCSRQGWK 98
D + P VG++F+ E +Y SY GF VR GQ + + + V + F+CS++G++
Sbjct: 23 DSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQ 82
Query: 99 SKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGL 149
+R GC A I V+ K+ + + + H+H L
Sbjct: 83 LN-----------------SRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116
>AT2G32250.1 | chr2:13693518-13696783 FORWARD LENGTH=808
Length = 807
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 49 GMKFEDIEAVEKFYKSYVHTVGFSVRIG---QQKKLNEVVQCKCFMCSRQGWKSKKGNEI 105
GM FE EA FY+ Y +VGF + I + K+ + + K CSR G K +K I
Sbjct: 41 GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVK-IACSRFGTKREKATAI 99
Query: 106 SDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVS 165
+ S + GC A + +K D K+ I + V+ H+H + PD + VS
Sbjct: 100 NPRSC-------PKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE-ICPDDFY-------VS 144
Query: 166 ERAKN 170
R KN
Sbjct: 145 VRGKN 149
>AT3G22170.1 | chr3:7822359-7825414 REVERSE LENGTH=840
Length = 839
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 26/236 (11%)
Query: 44 ITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIG---QQKKLNEVVQCKCFMCSRQGWKSK 100
+ P GM+FE FY+ Y +GF+ I + K E + K F CSR G K +
Sbjct: 68 LEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAK-FACSRYGTKRE 126
Query: 101 KGNEISDP-SKKRRKLKETRCG--------CDAHIFVKLCSDNKYHIASLVEHHSHGLVS 151
+ P +++ ++ E G C A + VK D K+ I S V H+H L+
Sbjct: 127 YDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELL- 185
Query: 152 PDKLHLMRSNREVSERAKN-----TLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDL 206
P + ++ + + AK T+ + S + + R L V G F+ + +
Sbjct: 186 PAQAVSEQTRKIYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLSVETGDFKILLDFLSRM 245
Query: 207 QNYYRDLRTKMKNADAEMLENVY-------NDYGNLLEEIAIDSSEMAVRKKISAA 255
Q+ + + D + ++NV+ ++YG+ + +++D++ + + K+ A
Sbjct: 246 QSLNSNFFYAVDLGDDQRVKNVFWVDAKSRHNYGSFCDVVSLDTTYVRNKYKMPLA 301
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,546,590
Number of extensions: 500236
Number of successful extensions: 1441
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 1428
Number of HSP's successfully gapped: 16
Length of query: 503
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 400
Effective length of database: 8,282,721
Effective search space: 3313088400
Effective search space used: 3313088400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)