BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0228200 Os08g0228200|Os08g0228200
(373 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407 260 9e-70
AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409 237 7e-63
AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443 216 1e-56
AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466 198 3e-51
AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411 197 9e-51
AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416 193 1e-49
AT5G13060.1 | chr5:4142958-4146952 FORWARD LENGTH=738 81 1e-15
AT5G19330.1 | chr5:6508095-6512701 REVERSE LENGTH=711 78 8e-15
AT3G56230.1 | chr3:20860899-20862135 REVERSE LENGTH=283 69 6e-12
AT4G08455.1 | chr4:5375891-5376922 FORWARD LENGTH=244 68 9e-12
AT1G21780.1 | chr1:7652476-7653866 FORWARD LENGTH=327 62 5e-10
AT1G55760.1 | chr1:20847117-20848507 REVERSE LENGTH=330 57 2e-08
AT3G48360.1 | chr3:17908482-17910471 REVERSE LENGTH=365 57 2e-08
AT1G05690.1 | chr1:1707809-1709132 FORWARD LENGTH=365 52 4e-07
AT1G01640.1 | chr1:231164-231915 REVERSE LENGTH=208 50 3e-06
>AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407
Length = 406
Score = 260 bits (664), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 214/354 (60%), Gaps = 19/354 (5%)
Query: 9 RPSSTTRTASSCKPETARGTHVFTIHGYSLQAVDGAGSNKASFIRSAAFDVGGFDWCLRY 68
+ ++ + T S+ + ET G+H F I GYSL V G G K ++ S F VGG+ W + +
Sbjct: 15 KSTAQSLTESTSRTETINGSHEFKISGYSL--VKGMGIGK--YVASDTFMVGGYSWAIYF 70
Query: 69 YHNGNIESDDD-YISVFLELMTKDAEVRTIFDIRMLDQYTDDSSCVLVSTTNNTRRVFGT 127
Y +G D+ Y+S+F+ L ++ A+VR +F++ ++DQ ++ V G
Sbjct: 71 YPDGKSPEDNSVYVSLFIALASEGADVRALFELTLVDQSGNERHKVHSHFGRTLES--GP 128
Query: 128 TNFKSKCLVWGSKNFIRRSELEGSVYLRDDRLMIECNLTVIKTPLVKTEERAAMPGDIIH 187
K + +WG K F +RS LE S YL+D+ L++ C + V+K+ R P +
Sbjct: 129 YTLKYRGSMWGYKRFFKRSLLESSDYLKDNGLLVRCCVGVVKS-------RTEGP-RCYN 180
Query: 188 FQVPPTNLSRDLGKLLEDNVGADLSFEVGGDVFPAHSVVLAARSPVFMAELYGPMRAKRG 247
VP + L + GKLLE GAD++FEV G+ FPAH +VLAARS VF A+L+GP+R++
Sbjct: 181 IPVPVSGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENT 240
Query: 248 ERIAIQDMQPVVFKALLHFMYTDSFSPAINDDLSRDERQE---LAKHLLVAADRYAVEGL 304
I I+D+Q +FK LLHF+Y D P + D + D + +A+HLL AADRYA+E L
Sbjct: 241 NCIIIEDVQAPIFKMLLHFIYWDEM-PDMQDLIGTDLKWASTLVAQHLLAAADRYALERL 299
Query: 305 KTICEKALCMSLSVDNVATIVALADQHNCGRLKEACVKFIASSNRLDDVVETEG 358
+TICE LC +S++ VAT +ALA+QH+C +LK AC+KFIA L V+ET+G
Sbjct: 300 RTICESKLCEGISINTVATTLALAEQHHCFQLKAACLKFIALPENLKAVMETDG 353
>AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409
Length = 408
Score = 237 bits (605), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 194/341 (56%), Gaps = 21/341 (6%)
Query: 23 ETARGTHVFTIHGYSLQAVDGAGSNKASFIRSAAFDVGGFDWCLRYYHNG-NIESDDDYI 81
ET G+H FTI GYSL G + FI+S F VGG+DW + +Y +G N E YI
Sbjct: 21 ETVNGSHQFTIQGYSL----AKGMSPGKFIQSDIFSVGGYDWAIYFYPDGKNPEDQSSYI 76
Query: 82 SVFLELMTKDAEVRTIFDIRMLDQYTDDSSCVLVSTTNNTRRVF--GTTNFKSKCLVWGS 139
S+F+ L + ++R +F++ ++DQ V ++ R G K K +WG
Sbjct: 77 SLFIALASDSNDIRALFELTLMDQSGKGKHKV----HSHFDRALEGGPYTLKYKGSMWGY 132
Query: 140 KNFIRRSELEGSVYLRDDRLMIECNLTVIKTPLVKTEERAAMPGDIIHFQVPPTNLSRDL 199
K F +RS LE S YL+DD L+I C + V++ L ++ + +P +N+ + L
Sbjct: 133 KRFFKRSALETSDYLKDDCLVINCTVGVVRARLEGPKQYGIV--------LPLSNMGQGL 184
Query: 200 GKLLEDNVGADLSFEVGGDVFPAHSVVLAARSPVFMAELYGPMRAKRGERIAIQDMQPVV 259
LL+ VG D++F+VG + + AH ++LAARSPVF A+ +GP+ +RI I D++P +
Sbjct: 185 KDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSI 244
Query: 260 FKALLHFMYTDSFSPA--INDDLSRDERQELAKHLLVAADRYAVEGLKTICEKALCMSLS 317
FKA+L F+YTD I S + +HLL AAD Y + LK +CE LC L
Sbjct: 245 FKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLKILCEVLLCEKLD 304
Query: 318 VDNVATIVALADQHNCGRLKEACVKFIASSNRLDDVVETEG 358
VDNVAT +ALA+QH +LK C++F+AS L V+++EG
Sbjct: 305 VDNVATTLALAEQHQFLQLKAFCLEFVASPANLGAVMKSEG 345
>AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443
Length = 442
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 198/373 (53%), Gaps = 58/373 (15%)
Query: 27 GTHVFTIHGYSLQAVDGAGSNKASFIRSAAFDVGGFDWCLRYYHNGNIESDDD-YISVFL 85
G H F I GYSL G G ++ S F VGG+ W + +Y +G D+ Y+S+F+
Sbjct: 34 GFHEFKICGYSLAKGVGVGK----YVASDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFI 89
Query: 86 ELMTKDAEVRTIFDIRMLDQYTDDSSCVLVSTTNNTRRVF--GTTNFKSKCLVWGSKNFI 143
L ++ A+VR +F++ ++DQ + V ++ R G K + +WG K F
Sbjct: 90 ALASEGADVRALFELTLVDQSGNGKHKV----HSHFGRALDSGPYTLKYRGSMWGYKRFF 145
Query: 144 RRSELEGSVYLRDDRLMIECNLTVIKTPLVKTEERAAMPGDIIHFQVPPTNLSRDLGKLL 203
RRS LE S YL+++ L++ C + V+K+ + + +P VP +NL + LG LL
Sbjct: 146 RRSSLESSDYLKENSLLVRCRVGVVKS-VTEGPRYYNIP-------VPVSNLGQQLGNLL 197
Query: 204 EDNVGADLSFEVGGDVFPAHSVVLAARSPVFMAELYGPMRAKRGERIAIQDMQPVVF--- 260
E G D+ F+V G+ F AH +VLA RSPVF A+L+GP+ + + I I+DM+ +F
Sbjct: 198 ESGKGCDVVFQVDGETFNAHKLVLATRSPVFNAQLFGPLGDRNTKCITIEDMEAPIFKVL 257
Query: 261 --------------------------------KALLHFMYTDSFSPAINDDLSRDERQE- 287
K LLHF+Y D P + + + D
Sbjct: 258 PLTLLLIVYSRMYHPGSSPGALLLFSSLLTRDKVLLHFIYWDEL-PDMQELIGTDSTLAS 316
Query: 288 --LAKHLLVAADRYAVEGLKTICEKALCMSLSVDNVATIVALADQHNCGRLKEACVKFIA 345
+A+HLL AADRYA+E LK ICE LC ++++ VAT +ALA+QH+C +LK C+KF+A
Sbjct: 317 TLVAQHLLAAADRYALERLKAICESKLCEGVAINTVATTLALAEQHHCLQLKAVCLKFVA 376
Query: 346 SSNRLDDVVETEG 358
L V++T+G
Sbjct: 377 LPENLKAVMQTDG 389
>AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466
Length = 465
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 185/345 (53%), Gaps = 27/345 (7%)
Query: 10 PSSTTRTASSCKPETARGTHVFTIHGYSLQAVDGAGSNKASFIRSAAFDVGGFDWCLRYY 69
PS T T+ S +T G+H FTI GYSL G G + I S F VGG+ W + +Y
Sbjct: 31 PSPPTTTSLSVT-QTINGSHSFTIKGYSLAKGIGIGKH----IASDTFTVGGYQWAIYFY 85
Query: 70 HNG-NIESDDDYISVFLELMTKDAEVRTIFDIRMLDQYTDDSSCVLVSTTNNTRRVF--G 126
+G N E + Y+SVF+ L + +VR +F++ +LDQ V ++ R G
Sbjct: 86 PDGKNPEDNSAYVSVFIALASDGTDVRALFELSLLDQSGKGKHKV----HSHFDRALESG 141
Query: 127 TTNFKSKCLVWGSKNFIRRSELEGSVYLRDDRLMIECNLTVIKTPLVKTEERAAMPGDII 186
K + +WG K F RR LE S +L+DD L I C + V+ + + + I
Sbjct: 142 PYTLKYRGSMWGYKRFFRRLMLETSDFLKDDCLKINCTVGVVVSEIDCPRLHS------I 195
Query: 187 HFQVPPTNLSRDLGKLLEDNVGADLSFEVGGDVFPAHSVVLAARSPVFMAELYGPMRAKR 246
H VP +++ G LLE+ G+D++F V G+ F AH +VLAARSPVF +E + +
Sbjct: 196 H--VPASDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFL-DVTGEE 252
Query: 247 GERIAIQDMQPVVFKALLHFMYTDSF------SPAINDDLSRDERQELAKHLLVAADRYA 300
I + DM+P VFKALLH++Y D+ S + + LA LL AAD+Y
Sbjct: 253 DRDIEVTDMEPKVFKALLHYIYKDALIEDAESSSSSGSSVGPSASDTLAAKLLGAADKYK 312
Query: 301 VEGLKTICEKALCMSLSVDNVATIVALADQHNCGRLKEACVKFIA 345
+ L +CE LC +SVD+VA I+ALAD++N LK C+KF A
Sbjct: 313 LPRLSLMCESVLCKDISVDSVANILALADRYNASALKSVCLKFAA 357
>AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411
Length = 410
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 191/353 (54%), Gaps = 30/353 (8%)
Query: 16 TASSCKPETARGTHVFTIHGYSLQAVDGAGSNKASFIRSAAFDVGGFDWCLRYYHNG-NI 74
T+S +T G+H F I GYSL G G + I S F VGG+ W + +Y +G N
Sbjct: 18 TSSKSVTQTVNGSHQFVIQGYSLAKGMGIGKH----IASDNFSVGGYQWGIFFYPDGKNP 73
Query: 75 ESDDDYISVFLELMTKDAEVRTIFDIRMLDQYTDDSSCVLVSTTNNTRRVF--GTTNFKS 132
E + Y+SVF+ L ++ EVR +F++ ++DQ V ++ R G K
Sbjct: 74 EDNSSYVSVFIALASEGTEVRALFELALVDQSGKGKHKV----HSHFERSLDGGPYTLKY 129
Query: 133 KCLVWGSKNFIRRSELEGSVYLRDDRLMIECNLTVIKTPLVKTEERAAMPGDIIHFQVPP 192
+ +WG K F RRS LE S YL+DD L+I C + V+ + ++ + + VP
Sbjct: 130 RGSMWGYKRFFRRSILETSDYLKDDCLIINCTVGVVVSEILCPQLHSV--------HVPD 181
Query: 193 TNLSRDLGKLLEDNVGADLSFEVGGDVFPAHSVVLAARSPVFMAELYGPMRAKRGERIAI 252
+ L G LL+ G+D++F + G+ F AH +VLAARSP F ++ + A E + I
Sbjct: 182 SELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTE-VTI 240
Query: 253 QDMQPVVFKALLHFMYTDSF----SPAINDDLSRDERQELAKHLLV----AADRYAVEGL 304
D++P VFKALL FMY DS PA R + E+ + L+V AAD+Y + L
Sbjct: 241 NDLEPKVFKALLQFMYKDSLPEDVEPATAHTFERLKLSEIYETLIVKVLAAADKYDLIRL 300
Query: 305 KTICEKALCMSLSVDNVATIVALADQHNCGRLKEACVKFIASSNRLDDVVETE 357
+ +CE +C +SV +VA I+ALAD++N LK C+KF A + L V+ET+
Sbjct: 301 RLLCESHICKGVSVKSVAKILALADRYNAKELKGVCLKFTAEN--LAAVLETD 351
>AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416
Length = 415
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 179/339 (52%), Gaps = 24/339 (7%)
Query: 16 TASSCKPETARGTHVFTIHGYSLQAVDGAGSNKASFIRSAAFDVGGFDWCLRYYHNG-NI 74
T+S +T G+H F I GYSL G G + I S F VGG+ W + Y +G N
Sbjct: 25 TSSRSVTQTTNGSHQFVIQGYSLAKGIGVGKH----IASDNFSVGGYQWTIFVYPDGKNP 80
Query: 75 ESDDDYISVFLELMTKDAEVRTIFDIRMLDQYTDDSSCVLVSTTNNTRRVFGTTNFKSKC 134
E + Y+SVF+ L ++ EVR +F++ ++DQ V + N G K +
Sbjct: 81 EDNSSYVSVFIVLASECTEVRALFELSLVDQSGKGKH--KVHSHFNRSLDGGPYTLKYRG 138
Query: 135 LVWGSKNFIRRSELEGSVYLRDDRLMIECNLTVIKTPLVKTEERAAMPGDIIHFQVPPTN 194
+WG K F RRS LE S YL+DD L I C + V+ + + P ++ VP +
Sbjct: 139 SMWGYKRFFRRSLLETSDYLKDDCLKINCTVGVVVSEM-------HCP-RLLSIHVPDSE 190
Query: 195 LSRDLGKLLEDNVGADLSFEVGGDVFPAHSVVLAARSPVFMAELYGPMRAKRGERIAIQD 254
L GKLL+ G+D++F+V G+ F AH +VLAARS F + Y + A+ + I D
Sbjct: 191 LGSHFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTL-AENNSDVVISD 249
Query: 255 MQPVVFKALLHFMYTDSFSPAIND------DLSRDERQE--LAKHLLVAADRYAVEGLKT 306
++P VFKALLHFMY DS + DL R + L LL AA+ Y + L+
Sbjct: 250 LEPKVFKALLHFMYKDSLPGDVEPLTAHSFDLLRPSEIDDTLIVKLLAAAEMYNLSRLRL 309
Query: 307 ICEKALCMSLSVDNVATIVALADQHNCGRLKEACVKFIA 345
+CE +C +S+ +V+ I+AL+D++N LK +KF A
Sbjct: 310 LCESHICKGISISSVSKILALSDKYNASELKSVSLKFTA 348
>AT5G13060.1 | chr5:4142958-4146952 FORWARD LENGTH=738
Length = 737
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 201 KLLEDNVGADLSFEVGGDVFPAHSVVLAARSPVFMAELYGPMRAKRGERIAIQDMQPVVF 260
K + + +D++F + G F AH + L A S +F A G + + + + I +++ VF
Sbjct: 560 KFVNNPTMSDVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEVF 619
Query: 261 KALLHFMYTDSFSPAINDDLSRDERQELAKHLLVAADRYAVEGLKTICEKALCMSLSVDN 320
+ ++ F+Y+ + A + LAK LLVAAD+Y +EGLK CE + + +DN
Sbjct: 620 ELMMKFIYSGRINIA----------KHLAKDLLVAADQYLLEGLKRQCEYTIAQEICLDN 669
Query: 321 VATIVALADQHNCGRLKEACVKFI 344
+ + LAD N L+ AC F+
Sbjct: 670 IPEMYELADTFNASALRRACTLFV 693
>AT5G19330.1 | chr5:6508095-6512701 REVERSE LENGTH=711
Length = 710
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 191 PPTNLSR-DLGKLLEDNVG-ADLSFEVGGDVFPAHSVVLAARSPVFMAELYGPMRAKRGE 248
PP+ R LG+ +N +D++F V G F AH + L A S F A G R K
Sbjct: 521 PPSPTQRVYLGEQYVNNATLSDVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDAR 580
Query: 249 RIAIQDMQPVVFKALLHFMYTDSFSPAINDDLSRDERQELAKHLLVAADRYAVEGLKTIC 308
I I +++ VF+ ++ F+YT S D E++K LL AAD+Y +EGLK +C
Sbjct: 581 DIEIPNIKWEVFELMMRFIYTGSV----------DITNEISKDLLRAADQYLLEGLKRLC 630
Query: 309 EKALCMSLSVDNVATIVALADQHNCGRLKEACVKFI 344
E + ++++++ + L++ + L++AC+ FI
Sbjct: 631 EYTIAQDITLESIGDMYELSEAFHAMSLRQACIMFI 666
>AT3G56230.1 | chr3:20860899-20862135 REVERSE LENGTH=283
Length = 282
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query: 203 LEDNVGADLSFEVG--GDVFPAHSVVLAARSPVFMAELYGPMRAKRGER-IAIQDMQPVV 259
++ + AD+ + G G PAH +LA++S +F L E I +Q++
Sbjct: 105 FKEQLHADILLKPGDDGPPIPAHRALLASKSEIFKNILDSDGCKTAPEYAITLQELNSEQ 164
Query: 260 FKALLHFMYTDSFSPAINDDLSRDERQELAKHLLVAADRYAVEGLKTICEKALCMSLSVD 319
+ALL F+YT + L+ D+ ++ L +AAD+Y + L+ +CE+ + SL +
Sbjct: 165 LQALLEFLYTGT--------LASDKLEKNVYALFIAADKYMIHYLQELCEQYMLSSLDIS 216
Query: 320 NVATIVALADQHNCGRLKEACVKFIASSNRLDDVV 354
+V ++ ++D + LKEACV F+ + +DDVV
Sbjct: 217 SVLNVLDVSDLGSSKTLKEACVGFVVRN--MDDVV 249
>AT4G08455.1 | chr4:5375891-5376922 FORWARD LENGTH=244
Length = 243
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 216 GGDVFPAHSVVLAARSPVFMAELYGPMRAKRGERIAIQDMQPVVFKALLHFMYTDSFSPA 275
G PAH VL +RSPVF A L M I I D+ + ++++YT + A
Sbjct: 76 GSPPIPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYT---AEA 132
Query: 276 INDDLSRDERQELAKHLLVAADRYAVEGLKTICEKALCMSLSVDNVATIVALADQHNCGR 335
D +++A LLV +++Y V+ LK+ CE+ L LS DN A A QHN
Sbjct: 133 CLD-------EQMACDLLVMSEKYQVKHLKSYCERFLVTKLSPDNSLMTYAFAHQHNAKH 185
Query: 336 LKEACVKFIASSNRLDDVVETEGSTESLETN 366
+ +A + I + +D + + E E +E +
Sbjct: 186 VLDAALSQIVEN--MDKLTKREEYMELVEKD 214
>AT1G21780.1 | chr1:7652476-7653866 FORWARD LENGTH=327
Length = 326
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 15/188 (7%)
Query: 171 PLVKTEERAAMPGDIIHFQVPPTNLSRDLGKLLEDNVGADLSFEVGGDVFPAHSVVLAAR 230
P+ E P D + + L ++LE+++ D+ AH +L+A
Sbjct: 123 PVNGGEASPVWPTDATMQSISTQTTLKCLSRMLEESILTDVIIHTADGTLSAHKAILSAS 182
Query: 231 SPVFMAELYGPMRAKRGERIAIQDMQPVVFKALLHFMYTDSFSPAINDDLSRDERQELAK 290
S VF + + + K I I DM ALL ++Y + ++E K
Sbjct: 183 STVFKSMFHHDLMEKESSTIHIDDMSRESCMALLSYLYGNI------------TQEEFWK 230
Query: 291 H---LLVAADRYAVEGLKTICEKALCMSLSVDNVATIVALADQHNCGRLKEACVKFIASS 347
H LL AA++Y + LK CE++L ++ NV + A + +LK+ C+ ++
Sbjct: 231 HRLALLGAANKYDITDLKAACEESLMEDINSSNVLERLQEAWLYQLEKLKKGCLMYLFDF 290
Query: 348 NRLDDVVE 355
++ DV E
Sbjct: 291 GKIYDVRE 298
>AT1G55760.1 | chr1:20847117-20848507 REVERSE LENGTH=330
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 199 LGKLLEDNVGADLSFEVGGDVFPAHSVVLAARSPVFMAELYGPMRAKRGERIAIQDMQPV 258
LG++L +++ D++ AH VLAARSPVF + ++ K I + DM
Sbjct: 154 LGRMLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELSEINVLDMPLD 213
Query: 259 VFKALLHFMYTDSFSPAINDDLSRDERQELAKHLLVAADRYAVEGLKTICEKALCMSLSV 318
+A L ++Y + N+D LA LL AA++Y + LK C +L +
Sbjct: 214 ACQAFLSYIYGN----IQNEDFL---IHRLA--LLQAAEKYDIADLKEACHLSLLDDIDT 264
Query: 319 DNVATIVALADQHNCGRLKEACVKFIASSNRLDDV 353
NV + A + LK +C++++ ++ ++
Sbjct: 265 KNVLERLQNAYLYQLPELKASCMRYLVKFGKIFEI 299
>AT3G48360.1 | chr3:17908482-17910471 REVERSE LENGTH=365
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 220 FPAHSVVLAARSPVFMAELYGPMRAKRG----ERIAIQDMQPVVFKALLHFMYTDSFSPA 275
PAHS VLA+ SPV M + PMR RG I I + + F+Y+ S
Sbjct: 46 IPAHSGVLASASPVLMNIMKKPMRRYRGCGSKRVIKILGVPCDAVSVFIKFLYSSS---- 101
Query: 276 INDDLSRDERQELAKHLLVAADRYAVEGLKTICEKALCMSLSVDNVATIVALA 328
L+ DE + HLL + Y V LK C K + L+ +NV ++ LA
Sbjct: 102 ----LTEDEMERYGIHLLALSHVYMVTQLKQRCSKGVVQRLTTENVVDVLQLA 150
>AT1G05690.1 | chr1:1707809-1709132 FORWARD LENGTH=365
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 201 KLLEDNVGADLSFEVGGDV-FPAHSVVLAARSPVFMAELYGPMRAKRGER-IAIQDMQPV 258
KL ++ GAD E FPAHS VLAA SPV +A L R K G + I +
Sbjct: 46 KLFKEGSGADTYVETDNKSHFPAHSSVLAAASPV-IATLLNQSRDKNGNTYLKIHGVPCE 104
Query: 259 VFKALLHFMYTDSFSPAINDDLSRDERQELAKHLLVAADRYAVEGLKTICEKALCMS-LS 317
+ F+Y+ + +E ++ HLLV + Y+V LK +C + L ++
Sbjct: 105 AVYMFIRFLYSSCY--------EEEEMKKFVLHLLVLSHCYSVPSLKRLCVEILDQGWIN 156
Query: 318 VDNVATIVALADQHNCGRLKEACVKFIASSNRLDDVVETEG 358
+NV ++ LA + R+ C+ + V TEG
Sbjct: 157 KENVIDVLQLARNCDVTRICFVCLSMVIKD--FKSVSSTEG 195
>AT1G01640.1 | chr1:231164-231915 REVERSE LENGTH=208
Length = 207
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 220 FPAHSVVLAARSPVFMAEL-YGPMRAKRGERIAIQDMQPVVFKALLHFMYTDSFSPAIND 278
P H VLAARS VF L + E I + D+ K+LL F+Y+ + N
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 279 DLSRDERQELAKHLLVAADRYAVEGLKTICEKALCMSLSVDNVATIVALADQHNCGRLKE 338
+ L +AAD+Y + L+ +C SLS NV I+ LA LK+
Sbjct: 97 ----------YRSLYLAADKYDISYLQDVCRNHFIASLSSRNVLDILELASIPCDTILKD 146
Query: 339 ACVKFIASSNRLDDVV 354
A + I +++VV
Sbjct: 147 AAINHIV--KHMEEVV 160
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,795,889
Number of extensions: 318090
Number of successful extensions: 838
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 801
Number of HSP's successfully gapped: 17
Length of query: 373
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 273
Effective length of database: 8,364,969
Effective search space: 2283636537
Effective search space used: 2283636537
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)