BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0224700 Os08g0224700|AK121754
(987 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G32730.1 | chr2:13880189-13885464 FORWARD LENGTH=1005 1388 0.0
AT1G04810.1 | chr1:1350304-1355261 FORWARD LENGTH=1002 1340 0.0
>AT2G32730.1 | chr2:13880189-13885464 FORWARD LENGTH=1005
Length = 1004
Score = 1388 bits (3592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/998 (71%), Positives = 789/998 (79%), Gaps = 27/998 (2%)
Query: 13 GLLAMLQEPAAELKLHALANLNSLVHVFWPEISTSVPAIESLYEDEEFD--QRQLAALVV 70
GLLAML EP LKLHAL+NLN+LV FWPEISTSVP IESLYEDEEFD QRQLAAL+V
Sbjct: 11 GLLAMLNEPHPVLKLHALSNLNNLVDQFWPEISTSVPIIESLYEDEEFDLHQRQLAALLV 70
Query: 71 SKVFYYLGELDDSLSYALGAGPLFDPSEGSDYAQTLLAKALDEYASIRSKSLKAAGEGDE 130
SKVFYYLGEL+DSLSYALGAGPLFD SE SDY TLLAKA+DEYAS+RSK++++ D
Sbjct: 71 SKVFYYLGELNDSLSYALGAGPLFDVSEDSDYVHTLLAKAIDEYASLRSKAVESNEMVD- 129
Query: 131 KMDPRLEAIVERMLDKCILDGKYQQAMGMSLECKRLDKLEEAISRSDNLNGSLSYSIILS 190
+DPRLEAIVERML KCI DGKYQQAMG+++EC+RLDKLEEAI +SDN+ G+LSY I +S
Sbjct: 130 -IDPRLEAIVERMLGKCISDGKYQQAMGIAIECRRLDKLEEAIIKSDNVQGTLSYCINVS 188
Query: 191 HQYVSHREYRCEILRCLVKIYQTLPNPDYLSICQCLMFLGEPETVGNILGKLL-SGSKDD 249
H +V+ REYR E+L LVK+YQ LP+PDYLSICQCLMFL EP+ V +IL KLL S +KDD
Sbjct: 189 HSFVNRREYRHEVLSLLVKVYQKLPSPDYLSICQCLMFLDEPQGVASILEKLLRSENKDD 248
Query: 250 ALLAFQIAFDLVENENQAFLLNVKNHLDTLSLQTSAQTLPSDQTAA--TEPSGDAQMTDD 307
ALLA QIAFDLVENE+QAFLL+V++ L + T + T A PSGD QM D+
Sbjct: 249 ALLALQIAFDLVENEHQAFLLSVRDRLPAPKTRAVEATQAVETTIAPNENPSGDVQMADE 308
Query: 308 AITPNGN-AHTVDPNEVAHADRLTKIKGILSGETSIQLTLQFLYSHNRSDLLILKTIKQA 366
TP H DP + +A+RLTKIKGILSGETSIQLTLQFLYSHN+SDLLILKTIKQ+
Sbjct: 309 --TPAQTIVHETDPVDATYAERLTKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQS 366
Query: 367 LEMRNSVCHSATICSNAIMHAGTTVDTFLRENLEWLSRATNWAKFSATAGLGVIHRGHLT 426
+EMRNSVCHSATI +NAIMHAGTTVDTFLRENL+WLSRATNWAKFSATAGLGVIHRGHL
Sbjct: 367 VEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQ 426
Query: 427 QGRALMAPYLPQSGAASGGSPYSEGGALYALGLIHANHGEGIKQFLRESLRNTSSEVVQH 486
QGR+LMAPYLPQ GA GGSPYSEGGALYALGLIHANHGEGIKQFLR+SLR+T+ EV+QH
Sbjct: 427 QGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLRSTNVEVIQH 486
Query: 487 XXXXXXXXXXXXXXDEEIFEDVKNILYTDSAVXXXXXXXXXXXXXXXXXSEKAGEMLAYA 546
DEEI++DVK++LYTDSAV +EKA EMLAYA
Sbjct: 487 GACLGLGLSALGTADEEIYDDVKSVLYTDSAVAGEAAGISMGLLLVGTATEKASEMLAYA 546
Query: 547 HDTQHEKIIRGLSLGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYRGTANN 606
H+TQHEKIIRGL+LGIALTVYGREE ADTLIEQMTRDQDPI+RYGGMYALALAY GTANN
Sbjct: 547 HETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYALALAYSGTANN 606
Query: 607 KAIHQLLHFAVSDVSDDVRRTAVLALGFVLYNEPEQTPRIVSLLSESYNPHVRYGAALAV 666
KAI QLLHFAVSDVSDDVRRTAVLALGFVLY++PEQTPRIVSLLSESYNPHVRYGAALAV
Sbjct: 607 KAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNPHVRYGAALAV 666
Query: 667 GISCAGTGLSDAISLLEPLTSDVVDFVRQGALIAMAMVMIQTNESYDSRVGTFRRQLEKI 726
GISCAGTGLS+AISLLEPLTSDVVDFVRQGALIAMAMVM+Q +E+ DSRVG FRRQLEKI
Sbjct: 667 GISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRVGVFRRQLEKI 726
Query: 727 ILDKHEDTMSKMGAIMATGILDAGGRNVTIRLQSRSKHDKLTAVVGLAVFTQFWYWYPLT 786
ILDKHEDTMSKMGAI+A+GILDAGGRNVTIRL S++KHDK+TAV+GLAVF+QFWYWYPL
Sbjct: 727 ILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAVIGLAVFSQFWYWYPLI 786
Query: 787 YFISLAFSPTAFIGLNSDLKVPKFEFLSNTKPSLFDYPKPTTQQTTTASVKLPTAILSTY 846
YFISLAFSPTAFIGLN DLKVPKFEF+S+ KPSLF+YPKPTT T +VKLPTA+LST
Sbjct: 787 YFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFEYPKPTTVPTANTAVKLPTAVLSTS 846
Query: 847 XXXXXXXXXXXXXXXXXXXXXPP---------------SEDASTSMQVDGVA--EKKAPE 889
P +E SMQVD A EKKAPE
Sbjct: 847 VKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKGKASTEKEGDSMQVDSPAAVEKKAPE 906
Query: 890 PEPTFQILTNPARVVPAQEKFIKFLEGGRYEPVKLAPSGFVLLRDLKPTETEELVLTDXX 949
PEP F+IL NPARVVPAQEK+IK L+ RY PVKLAPSGFVLL+DL+ E E L LTD
Sbjct: 907 PEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKLAPSGFVLLKDLREHEPEVLSLTDAP 966
Query: 950 XXXXXXXXXXXXXXXXXXXXXXXVDEEPLPPQPFEYTS 987
VD+EP PPQ FEY S
Sbjct: 967 TSTASPATGTAAAAQGTPASAMAVDDEPQPPQAFEYAS 1004
>AT1G04810.1 | chr1:1350304-1355261 FORWARD LENGTH=1002
Length = 1001
Score = 1340 bits (3467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/1001 (68%), Positives = 781/1001 (78%), Gaps = 37/1001 (3%)
Query: 13 GLLAMLQEPAAELKLHALANLNSLVHVFWPEISTSVPAIESLYEDEEFDQ--RQLAALVV 70
GLLAML EP LKLHAL+ L LV FWPEISTSVP IESLYEDEEFDQ RQLAAL+
Sbjct: 11 GLLAMLNEPHPSLKLHALSYLIRLVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLA 70
Query: 71 SKVFYYLGELDDSLSYALGAGPLFDPSEGSDYAQTLLAKALDEYASIRSKSLKAAGEGDE 130
SKVFYYLGEL+DSLSYALGAG LFD SE SDY TLL+KA+DEYA +RSK+++++ +
Sbjct: 71 SKVFYYLGELNDSLSYALGAGSLFDVSEDSDYIHTLLSKAIDEYAILRSKAVESSEVVE- 129
Query: 131 KMDPRLEAIVERMLDKCILDGKYQQAMGMSLECKRLDKLEEAISRSDNLNGSLSYSIILS 190
+DPRL AIVERMLDKCI DGKYQQAMG+++EC+RLDKLEEAI +S+N+ G+LSY I +S
Sbjct: 130 -IDPRLVAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAIIKSENVQGTLSYCINVS 188
Query: 191 HQYVSHREYRCEILRCLVKIYQTLPNPDYLSICQCLMFLGEPETVGNILGKLL-SGSKDD 249
H +V+ REYR E+LR LV +YQ L +PDYLSICQCLMFL EP+ V +IL KLL S +KDD
Sbjct: 189 HSFVNQREYRHEVLRLLVNVYQKLASPDYLSICQCLMFLDEPQGVASILEKLLRSENKDD 248
Query: 250 ALLAFQIAFDLVENENQAFLLNVKNHLDTLSLQTSAQTLPSDQTAATEPS--------GD 301
ALLAFQI+FDLV+NE+QAFL++V++ L + +T P + A E S GD
Sbjct: 249 ALLAFQISFDLVQNEHQAFLMSVRDRL------PAPKTRPVEAIQAVETSTAQNENTAGD 302
Query: 302 AQMTDDAITPNGN-AHTVDPNEVAHADRLTKIKGILSGETSIQLTLQFLYSHNRSDLLIL 360
QM D+ TP+ H DP + +A+RLTK KGILSGETSIQLTLQFLYSHN+SDLLIL
Sbjct: 303 VQMADE--TPSQTIVHETDPVDAVYAERLTKAKGILSGETSIQLTLQFLYSHNKSDLLIL 360
Query: 361 KTIKQALEMRNSVCHSATICSNAIMHAGTTVDTFLRENLEWLSRATNWAKFSATAGLGVI 420
KTIKQ++EMRNSVCHSATI +NAIMHAGTTVDTFLRENL+WLSRATNWAKFSATAGLGVI
Sbjct: 361 KTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVI 420
Query: 421 HRGHLTQGRALMAPYLPQSGAASGGSPYSEGGALYALGLIHANHGEGIKQFLRESLRNTS 480
HRGHL QGR+LMAPYLPQ GA GGSPYSEGGALYALGLIHANHGEGIKQFLR+SLR+TS
Sbjct: 421 HRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLRSTS 480
Query: 481 SEVVQHXXXXXXXXXXXXXXDEEIFEDVKNILYTDSAVXXXXXXXXXXXXXXXXXSEKAG 540
EV+QH DE+I++D+K++LYTDSAV ++KA
Sbjct: 481 VEVIQHGACLGLGLAALGTADEDIYDDIKSVLYTDSAVAGEAAGISMGLLLVGTATDKAS 540
Query: 541 EMLAYAHDTQHEKIIRGLSLGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAY 600
EMLAYAH+TQHEKIIRGL+LGIALTVYGREE ADTLIEQMTRDQDPI+RYGGMYALALAY
Sbjct: 541 EMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYALALAY 600
Query: 601 RGTANNKAIHQLLHFAVSDVSDDVRRTAVLALGFVLYNEPEQTPRIVSLLSESYNPHVRY 660
GTANNKAI QLLHFAVSDVSDDVRRTAVLALGFVLY++PEQTPRIVSLLSESYNPHVRY
Sbjct: 601 SGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNPHVRY 660
Query: 661 GAALAVGISCAGTGLSDAISLLEPLTSDVVDFVRQGALIAMAMVMIQTNESYDSRVGTFR 720
GAALAVGISCAGTGLS+AISLLEPLTSDVVDFVRQGALIAMAMVM+Q +E+ DSRVG FR
Sbjct: 661 GAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRVGAFR 720
Query: 721 RQLEKIILDKHEDTMSKMGAIMATGILDAGGRNVTIRLQSRSKHDKLTAVVGLAVFTQFW 780
RQLEKIILDKHEDTMSKMGAI+A+GILDAGGRNVTIRL S++KHDK+TAV+GL VF+QFW
Sbjct: 721 RQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAVIGLTVFSQFW 780
Query: 781 YWYPLTYFISLAFSPTAFIGLNSDLKVPKFEFLSNTKPSLFDYPKPTTQQTTTASVKLPT 840
YWYPL YFISLAFSPTAFIGLN DLKVPKFEF+S+ KPSLF+YPKPTT T + KLPT
Sbjct: 781 YWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFEYPKPTTVATANTAAKLPT 840
Query: 841 AILST--------YXXXXXXXXXXXXXXXXXXXXXPPSEDASTSMQVDGVA---EKKAPE 889
A+LST E + SMQVD A EKK E
Sbjct: 841 AVLSTSAKAKAKAKKEAEQKAKAENSGNEAGKANAASDEKEAESMQVDSTATTVEKKV-E 899
Query: 890 PEPTFQILTNPARVVPAQEKFIKFLEGGRYEPVKLAPSGFVLLRDLKPTETEELVLTDXX 949
PE TF+IL NPARVVP+QEK+IK +E RY P+KLAPSGFVLLRDL+P E E L LTD
Sbjct: 900 PEATFEILVNPARVVPSQEKYIKLMEDSRYVPMKLAPSGFVLLRDLRPHEPEVLSLTDAP 959
Query: 950 XXXXX---XXXXXXXXXXXXXXXXXXVDEEPLPPQPFEYTS 987
+D+EP PPQ FEY S
Sbjct: 960 TSTASPAVGAEAAGQAQQAATTSAMAIDDEPQPPQAFEYAS 1000
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,750,030
Number of extensions: 754554
Number of successful extensions: 1977
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1957
Number of HSP's successfully gapped: 6
Length of query: 987
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 879
Effective length of database: 8,145,641
Effective search space: 7160018439
Effective search space used: 7160018439
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 117 (49.7 bits)