BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0220600 Os08g0220600|AK105274
(630 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G30200.2 | chr4:14786852-14790070 REVERSE LENGTH=715 367 e-102
AT5G57380.1 | chr5:23246538-23249289 REVERSE LENGTH=621 330 1e-90
AT2G18880.1 | chr2:8176386-8178788 FORWARD LENGTH=530 218 6e-57
AT3G24440.1 | chr3:8876207-8878171 REVERSE LENGTH=603 194 1e-49
AT2G18870.1 | chr2:8167471-8168668 FORWARD LENGTH=240 71 2e-12
>AT4G30200.2 | chr4:14786852-14790070 REVERSE LENGTH=715
Length = 714
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 251/709 (35%), Positives = 371/709 (52%), Gaps = 85/709 (11%)
Query: 2 DPGKHNGMSLKDRRELVYEVSQWPQGASEILQCWTRRDLLELICAELGKERKYTNVPKSK 61
D K + MS+ ++R+LVYE+S+ A+E+LQ W+R+++L+++CAE+GKERKYT + K K
Sbjct: 11 DSSKCSEMSVDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGKERKYTGLTKVK 70
Query: 62 MIAYLLKLVLRKN-----GQPKDDNANASILGQXXXXXXXXXXXXXQPHHFSRSAKSDSS 116
+I LLK+V KN G+ +D + P ++ + S
Sbjct: 71 IIETLLKIVSEKNSGECEGKKRDSDCLPIQRNTKRQRKVDNPSRYVIPATNIVTSNNASG 130
Query: 117 MCREAQA---GSTAVCRNVACQATLNSGDAYCKRCSCCICHKYDENKDPSLWLVCSSDTP 173
C +T C+N+AC+A L D++C+RCSCCIC KYD+NKDPSLWL CSSD P
Sbjct: 131 SCSSVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPP 190
Query: 174 YSGYSCGTSCHLKCALKNKKAGIFKNGCNKKSDG-SFYCVWCGKMNWLMRNLRKQLAIAR 232
+ G SCG SCHL+CA +K+G+ G +K+S+G FYCV CGK N L+ +KQL IA+
Sbjct: 191 FEGESCGFSCHLECAFNTEKSGL---GKDKQSEGCCFYCVSCGKANSLLECWKKQLTIAK 247
Query: 233 ESRRVDVLCERLSLTHKMVKGSERYRELANIINSAVKILEKEVGCALDQVSAITGRGIVN 292
E+RRV+VLC RL L K++K S +YR L +++ AVK LE +VG L + GRGIVN
Sbjct: 248 ETRRVEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVG-PLTGLPMKMGRGIVN 306
Query: 293 RLCCGADVQKLCSCALEMVDSTLSSTLD-----------------FETNNNLEAPGP--- 332
RL G DVQKLCS ALE +++ ++ D + +N + A
Sbjct: 307 RLHSGPDVQKLCSSALESLETIATTPPDVAALPSPRSSKMQQDCSYVLSNEISADTATTG 366
Query: 333 QPQVFFVEITPFSVLVVLKYQDNIA-EEIDGCKVWHRSANMANYPAEPTCHVLRPNTRSL 391
++ F ++ S+ VVL + + I +WHR +YP + TC + PNTR +
Sbjct: 367 STKIRFEDVNATSLTVVLASNEIPSPPNIVHYSIWHRKVPEKDYPEKSTCTLFIPNTRFV 426
Query: 392 FSGLSPSTEYFFKVLPFGCSQGYGEWEVKCSTRSLNHGSSQCSTQNSESMSIKEDLEQHQ 451
SGL+P++EY FKV+ + ++ G E+ TRS G++ CS+ S+S +
Sbjct: 427 VSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEGAN-CSSAVERSVSPLTNCSTLS 485
Query: 452 KNELNLKNKQWWGIQYDSPSANSNENDVCPDLHPKRAKLAKLDGASD------------- 498
N +++ + ++ NE++ P + AK K SD
Sbjct: 486 SNPSSVEAESNNDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIVQIEKDVEQIVL 545
Query: 499 -NDESQ---LLPTSEVLPFM-----------SSNSSLSEVPSKPDWVS------------ 531
+DE Q L T P + SS++SL P + D +
Sbjct: 546 LDDEEQEAVLDKTESETPVVVTTKSLVGNRNSSDASLPITPFRSDEIKNRQARIEISMKD 605
Query: 532 --STPDSACKNHVERQYEYSVKVIRWLEHEGHMDKDFRVKFLTWFSLKASAQERRIVNAF 589
+ D + E E+ VK+IR LE GH+DK+FR KFLTW+SL+A++QE R+V F
Sbjct: 606 NCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWYSLRATSQEIRVVKIF 665
Query: 590 VDALVSDPASLVAQLIDSFMEVVCSKEKPAQ--------PNGGCCNLWH 630
+D + DP +L QLID+F + V K P+G C LWH
Sbjct: 666 IDTFIDDPMALAEQLIDTFDDRVSIKRSAVGGSGASAVVPSGFCMKLWH 714
>AT5G57380.1 | chr5:23246538-23249289 REVERSE LENGTH=621
Length = 620
Score = 330 bits (846), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 224/647 (34%), Positives = 332/647 (51%), Gaps = 83/647 (12%)
Query: 5 KHNGMSLKDRRELVYEVSQWPQGASEILQCWTRRDLLELICAELGKERKYTNVPKSKMIA 64
K N +++ +RREL++ +S P+ ASE+L W+R +++++ICAE+GKERKYT + K K+I
Sbjct: 36 KPNVLNVSERRELIHALSNQPEEASELLNSWSRNEIMKIICAEMGKERKYTGLNKPKLIE 95
Query: 65 YLLKLVLRKNGQPKDDNANASILGQXXXXXXXXXXXXXQPHHFSRSAKSDSSMCREAQAG 124
LL LV R G+ S S + +S + G
Sbjct: 96 NLLNLVSRPLGET------------------------------SCSDRRNSRKKEKKMIG 125
Query: 125 STAVCRNVACQATLNSGDAYCKRCSCCICHKYDENKDPSLWLVCSSDTPYSGYSCGTSCH 184
C N+AC+A L D +C+RCSCCIC K+D+NKDPSLWL C + CG+SCH
Sbjct: 126 YIICCENLACRAALGCDDTFCRRCSCCICQKFDDNKDPSLWLTCDA--------CGSSCH 177
Query: 185 LKCALKNKKAGIFKNGCNKKSDGSFYCVWCGKMNWLMRNLRKQLAIARESRRVDVLCERL 244
L+C LK + GI + DG FYC +CGK N L+ RKQ+ +A+E+RRVDVLC RL
Sbjct: 178 LECGLKQDRYGIGSDDL----DGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRL 233
Query: 245 SLTHKMVKGSERYRELANIINSAVKILEKEVGCALDQVSAITGRGIVNRLCCGADVQKLC 304
SL K+++G+ +YR L +++ AVK LE +VG L + RGIVNRL G VQKLC
Sbjct: 234 SLGQKLLRGTTKYRNLLELMDEAVKKLEGDVG-PLSGWAMKMARGIVNRLSSGVHVQKLC 292
Query: 305 SCALEMVDSTLSSTLDFETNNNLEAPGPQPQVFFVEITPFSVLVVLKYQD---NIAEEID 361
S A+E +D +S + ++ G + V EI SV V + ++ + +I
Sbjct: 293 SQAMEALDKVVSPS------ESVSGQGDKMTVRVEEIQARSVTVRVDSEEPSSSTQNKIT 346
Query: 362 GCKVWHRSANMANYPAEPTCHVLRPNTRSLFSGLSPSTEYFFKVLPFGCSQGYGEWEVKC 421
G +++ R + ++ C V P T S GL P TE+ +V+ F E E++
Sbjct: 347 GFRLFCRKSKDEECSSQGNCVVYLPETTSAIQGLEPDTEFCLRVVSFNEEGDLDESELRF 406
Query: 422 STRSLNH---GSSQCSTQNSES-MSIKEDLEQHQKNELNLKNKQWWGIQYDSP--SANSN 475
+T + G Q NS S + L + + N +N + G + ++ SA
Sbjct: 407 TTLKDDGDEAGDQQSPLTNSSSGLCSNPSLPEDESNNVNKSCSKGNGDKDNTEHCSAGEV 466
Query: 476 ENDVCPDLHPKRAKLAKLDGASDNDESQLLPTSEVL---------PFMSSNSSLSEVPSK 526
E+++ + KR K K+DG + + P + F S SL+E P
Sbjct: 467 ESELEEERLVKR-KANKIDGR----DLLVTPCKRDIYKGKQGGNKRFKSRTVSLNEKPEI 521
Query: 527 PDWVSSTPDSACKNHVERQYEYSVKVIRWLEHEGHMDKDFRVKFLTWFSLKASAQERRIV 586
+ + D + + VK IR LE EGH+DK FR +FLTW+SL+A+ +E R+V
Sbjct: 522 NNAANGVGD--------KDLGHIVKTIRCLEEEGHIDKSFRERFLTWYSLRATHREVRVV 573
Query: 587 NAFVDALVSDPASLVAQLIDSFMEVVCSKEKPAQ---PNGGCCNLWH 630
FV+ + D +SL QL+D+F E + SK P G C LWH
Sbjct: 574 KIFVETFMEDLSSLGQQLVDTFSESILSKRSSTNGVVPAGICLKLWH 620
>AT2G18880.1 | chr2:8176386-8178788 FORWARD LENGTH=530
Length = 529
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 220/427 (51%), Gaps = 44/427 (10%)
Query: 9 MSLKDRRELVYEVSQWPQGA-SEILQCWTRRDLLELICAELGKERKYTNVPKSKMIAYLL 67
MS RR+LV ++S+ + E+L+ W+ ++ EL+ AE K+ KYT + K ++I L
Sbjct: 18 MSFDQRRQLVLKLSKESEREFKEVLKDWSCNEIRELLRAESKKDIKYTGLTKDEIITRLF 77
Query: 68 KLVLRKNGQPKDDNANASILGQXXXXXXXXXXXXXQPHHFSRSAKSDSSMCREAQAGSTA 127
+V +KN + D+ I+ R + + +A+
Sbjct: 78 NIVSKKNTR---DHEVEEIIPSP-----------------KRQKRDLVTPLAKAKGKGKM 117
Query: 128 VCRNVACQATLNSGDAYCKRCSCCICHKYDENKDPSLWLVCSSDTPYSGYSCGTSCHLKC 187
C+N+ACQ L +CKRCSCCIC KYD+NKDPSLWL C+SD+ + G SCG SCHL C
Sbjct: 118 YCQNLACQNKLREEATFCKRCSCCICFKYDDNKDPSLWLTCNSDSQFDGESCGLSCHLNC 177
Query: 188 ALKNKKAGIFKNGCNKKSDGSFYCVWCGKMNWLMRNLRKQLAIARESRRVDVLCERLSLT 247
A ++K+G+ ++ + DG F CV CGK N + L+KQL IA E RRV V C R+ L
Sbjct: 178 AFDSEKSGLKEDTPSSDIDGCFNCVSCGKTNSKIECLKKQLIIANEERRVGVFCYRILLA 237
Query: 248 HKMVKGSERYRELANIINSAVKILEKEVGCALDQVSAITGRGIVNRLCCGADVQKLCSCA 307
HK++KG+++Y ++ + AV L+ E G + + + RG+VNRLCC V+K CS A
Sbjct: 238 HKLLKGTKKYIIVSEEVEKAVMHLKNEFGVPISCLPSKMSRGLVNRLCCAEKVKKHCSSA 297
Query: 308 LEMVDSTLSSTLDFETNNNLEAPGPQPQVFFVEITPFSVLVVLKYQDNIAEE------ID 361
L+ +D P P ++I SVL D AEE +
Sbjct: 298 LKELDG---------------LPLPSTIQGSMKIRIESVLATSVTFDIEAEESFSWGDTN 342
Query: 362 GCKVWHRSANMANYPAEPTCHVLRPNTRSLFS--GLSPSTEYFFKVLPFGCSQGYGEWEV 419
++ +R + + + T + ++ F+ L+P+TEY+FK++ F + E
Sbjct: 343 HYRMVYRKVSEKHSSKDLTRELFSTSSHQRFTVMELTPATEYWFKIVSFSGVEELSVDEF 402
Query: 420 KCSTRSL 426
ST++L
Sbjct: 403 IVSTKTL 409
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 546 YEYSVKVIRWLEHEGHMDKDFRVKFLTWFSLKASAQERRIVNAFVDALVSDPASLVAQLI 605
+E V +IR LE G + DFR KFLTW+ LKA+ +E+ +V FVD D +L QLI
Sbjct: 440 FEECVNLIRQLECSGQVKSDFRKKFLTWYCLKATDKEKHVVEIFVDTFKDDKEALAKQLI 499
Query: 606 DSFMEVVCSKEKPAQPNGG 624
D+F + C K + GG
Sbjct: 500 DTFSD--CITRKHPEIGGG 516
>AT3G24440.1 | chr3:8876207-8878171 REVERSE LENGTH=603
Length = 602
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 169/304 (55%), Gaps = 12/304 (3%)
Query: 125 STAVCRNVACQATLNSGDAYCKRCSCCICHKYDENKDPSLWLVCSSDTPYSGYSCGTSCH 184
S+ +C+N +C+A + D++CKRCSCC+CH +DENKDPSLWLVC + CG SCH
Sbjct: 45 SSWICKNASCRANVPKEDSFCKRCSCCVCHNFDENKDPSLWLVCEPEKSDDVEFCGLSCH 104
Query: 185 LKCALKNKKAGIFKNGCNKKSDGSFYCVWCGKMNWLMRNLRKQLAIARESRRVDVLCERL 244
++CA + K G+ G K DG F C CGK++ ++ +KQL A+E+RR D LC R+
Sbjct: 105 IECAFREVKVGVIALGNLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEARRRDGLCYRI 164
Query: 245 SLTHKMVKGSERYRELANIINSAVKILEKEVGCALDQVSAITGRGIVNRLCCGADVQKLC 304
L ++++ G+ R+ EL I+ +A +LE EVG LD +A T RGIV+RL A+VQ+LC
Sbjct: 165 DLGYRLLNGTSRFSELHEIVRAAKSMLEDEVG-PLDGPTARTDRGIVSRLPVAANVQELC 223
Query: 305 SCALEMVDSTLSSTLDFETNNNLEAPGPQPQVFFVEITPFSV-LVVLKYQDNIAEEIDGC 363
+ A++ + N + + F +I P V L +++ + ++ G
Sbjct: 224 TSAIKKAG-------ELSANAGRDLVPAACRFHFEDIAPKQVTLRLIELPSAVEYDVKGY 276
Query: 364 KVWH-RSANMANYPAEPTCHVLRPNTRSLFSGLSPSTEYFFKVLPFGCSQGYGEWEVKCS 422
K+W+ + M C R R + S L P TEY F+V+ + + +G C
Sbjct: 277 KLWYFKKGEMPEDDLFVDCS--RTERRMVISDLEPCTEYTFRVVSYTEAGIFGHSNAMCF 334
Query: 423 TRSL 426
T+S+
Sbjct: 335 TKSV 338
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Query: 542 VERQYEYSVKVIRWLEHEGHMDKDFRVKFLTWFSLKASAQERRIVNAFVDALVSDPASLV 601
++ E VKVIRWLE EGH+ FRV+FLTWFS+ ++AQE+ +V+ FV L DP SL
Sbjct: 519 IDDTLEKCVKVIRWLEREGHIKTTFRVRFLTWFSMSSTAQEQSVVSTFVQTLEDDPGSLA 578
Query: 602 AQLIDSFMEVVCSKEKPAQPNGG 624
QL+D+F +VV +K +PN G
Sbjct: 579 GQLVDAFTDVVSTK----RPNNG 597
>AT2G18870.1 | chr2:8167471-8168668 FORWARD LENGTH=240
Length = 239
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 547 EYSVKVIRWLEHEGHMDKDFRVKFLTWFSLKASAQERRIVNAFVDALVSDPASLVAQLID 606
E VK+IR LE G+++ FR KFLTWFSL+A++QER V F++A D +L QL+D
Sbjct: 145 EQCVKIIRKLECSGYVESTFRQKFLTWFSLRATSQERNTVTTFMNAFNDDSMALAEQLVD 204
Query: 607 SFMEVVCSK 615
+F + + SK
Sbjct: 205 TFSDCIWSK 213
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,445,711
Number of extensions: 615066
Number of successful extensions: 1791
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1780
Number of HSP's successfully gapped: 10
Length of query: 630
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 525
Effective length of database: 8,227,889
Effective search space: 4319641725
Effective search space used: 4319641725
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)