BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0206500 Os08g0206500|Os08g0206500
(484 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G56170.1 | chr1:21025118-21025717 FORWARD LENGTH=200 161 6e-40
AT1G08970.4 | chr1:2883144-2883839 FORWARD LENGTH=232 156 2e-38
AT1G54830.2 | chr1:20451672-20452325 FORWARD LENGTH=218 155 4e-38
AT3G48590.1 | chr3:18008893-18009938 REVERSE LENGTH=235 153 2e-37
AT5G63470.1 | chr5:25416037-25417084 REVERSE LENGTH=251 150 1e-36
AT5G50480.1 | chr5:20557856-20558464 REVERSE LENGTH=203 117 1e-26
AT5G27910.1 | chr5:9940736-9941299 REVERSE LENGTH=188 112 6e-25
AT5G50490.1 | chr5:20560610-20561170 REVERSE LENGTH=187 104 1e-22
AT5G50470.1 | chr5:20555120-20555758 REVERSE LENGTH=213 96 3e-20
AT5G38140.1 | chr5:15220377-15222025 REVERSE LENGTH=196 94 2e-19
AT3G12480.1 | chr3:3958065-3960278 FORWARD LENGTH=294 62 9e-10
AT5G19490.1 | chr5:6576769-6578273 REVERSE LENGTH=265 54 2e-07
AT1G65681.1 | chr1:24428875-24430670 FORWARD LENGTH=224 51 1e-06
AT2G45110.1 | chr2:18599575-18601237 FORWARD LENGTH=260 51 2e-06
>AT1G56170.1 | chr1:21025118-21025717 FORWARD LENGTH=200
Length = 199
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 94/114 (82%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FWA+QM E+E T+FK LPLARIKKIMKADEDV+MI+ EAP +FAKACEMFIL++TLR
Sbjct: 58 FWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 117
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDGMGSQAASMVS 430
+W HTEE +RRTLQ++D+ A I +TD+FDFLVDII D++K++G+G ++ S
Sbjct: 118 AWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGTIPS 171
>AT1G08970.4 | chr1:2883144-2883839 FORWARD LENGTH=232
Length = 231
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FW +Q E+E+ T+FK +LPLARIKKIMKADEDV+MI+ EAP +FA+ACEMFIL++TLR
Sbjct: 62 FWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLR 121
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDGMGSQAASMVSPYTSGG 436
SW HTEE +RRTLQ++D+ A + +TDIFDFLVDI+ + ++D+ +GS V + G
Sbjct: 122 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAAG 181
Query: 437 MGFSF 441
+ +
Sbjct: 182 YPYGY 186
>AT1G54830.2 | chr1:20451672-20452325 FORWARD LENGTH=218
Length = 217
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 96/120 (80%), Gaps = 4/120 (3%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FW Q E+E+ T+FK +LPLARIKKIMKADEDV+MI+ EAP +FA+ACEMFIL++TLR
Sbjct: 52 FWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLR 111
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDD---GMGSQAASMVS-PY 432
SW HTEE +RRTLQ++D+ A + +TDIFDFLVDI+ + ++D+ G+G++AA+ PY
Sbjct: 112 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATAAGYPY 171
>AT3G48590.1 | chr3:18008893-18009938 REVERSE LENGTH=235
Length = 234
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 91/119 (76%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FW Q E+EQ+ +FK LPLARIKKIMKADEDV+MI+ EAP LFAKACE+FIL++T+R
Sbjct: 47 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 106
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDGMGSQAASMVSPYTSG 435
SW H EE +RRTLQ++D+ A I +TDIFDFLVDI+ D++KD+ +V+P SG
Sbjct: 107 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASG 165
>AT5G63470.1 | chr5:25416037-25417084 REVERSE LENGTH=251
Length = 250
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 93/122 (76%), Gaps = 3/122 (2%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FW Q E+EQ+ +FK LPLARIKKIMKADEDV+MI+ EAP LFAKACE+FIL++T+R
Sbjct: 60 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 119
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDGMGSQA---ASMVSPYT 433
SW H EE +RRTLQ++D+ A I +TDIFDFLVDI+ +++K++ + A MV+P
Sbjct: 120 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAA 179
Query: 434 SG 435
SG
Sbjct: 180 SG 181
>AT5G50480.1 | chr5:20557856-20558464 REVERSE LENGTH=203
Length = 202
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 82/121 (67%), Gaps = 8/121 (6%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
+W +QM E +++FK LPLARIKKIMKAD DV M++ EAP +FAKACEMFI+D+T+R
Sbjct: 39 YWIEQM---ETVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMR 95
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDGMGSQAASMVS-PYTSG 435
SW EE +R TLQ+SD+ + + +DFL+D++ KD+ + + V+ P+ G
Sbjct: 96 SWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVP----KDESIATADPGFVAMPHPDG 151
Query: 436 G 436
G
Sbjct: 152 G 152
>AT5G27910.1 | chr5:9940736-9941299 REVERSE LENGTH=188
Length = 187
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 81/120 (67%), Gaps = 5/120 (4%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FW+ +M E +FK +LP+ RIKKIMK D DV MIA EAP L +KACEMFI+D+T+R
Sbjct: 21 FWSKEM---EGNLDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMR 77
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDGMGSQAASMVSPYTSGG 436
SW H +E +R TLQ+S+V+A + +T IFDFL+D D ++K + + + A + P G
Sbjct: 78 SWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLD--DDIEVKRESVAAAADPVAMPPIDDG 135
>AT5G50490.1 | chr5:20560610-20561170 REVERSE LENGTH=187
Length = 186
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 7/111 (6%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
FW+ M E K P++RIK+IMK D DV MIA EAP L +KACEMF++D+T+R
Sbjct: 21 FWSKGM---EGDLNVKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMR 77
Query: 377 SWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMKDDGMGSQAAS 427
SW H +E R T+++SDV+AV+ +T IFDFL DD KD+G AA+
Sbjct: 78 SWLHAQESNRLTIRKSDVDAVVSQTVIFDFL----RDDVPKDEGEPVVAAA 124
>AT5G50470.1 | chr5:20555120-20555758 REVERSE LENGTH=213
Length = 212
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
Query: 317 FWADQMAEVEQMTEFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLR 376
+W QM T+ K PL RIKKIMK++ +V M+ EAP L +KACEM ILD+T+R
Sbjct: 48 YWIAQMGNA---TDVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMR 104
Query: 377 SWQHTEEGRRRTLQ------RSDVEAVIKKTDIFDFLVDIITDD 414
SW HT EG R+TL+ RSD+ A ++ F FL D++ D
Sbjct: 105 SWLHTVEGGRQTLKRSDTLTRSDISAATTRSFKFTFLGDVVPRD 148
>AT5G38140.1 | chr5:15220377-15222025 REVERSE LENGTH=196
Length = 195
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
Query: 317 FWADQMAEVEQMTEFK-LPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTL 375
FW +Q EQ+ F +LPL+R++KI+K+D +VK I+ + PALF+KACE FIL++TL
Sbjct: 51 FWNNQR---EQLGNFAGQTHLPLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTL 107
Query: 376 RSWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDII 411
R+W HT+ R T++R D+ +K + +DFL+D +
Sbjct: 108 RAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRV 143
>AT3G12480.1 | chr3:3958065-3960278 FORWARD LENGTH=294
Length = 293
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 336 LPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLRSWQHTEEGRRRTLQRSDVE 395
P ARIKKIM+ADEDV IA P L +K+ E+F+ D+ R+++ T E +T+ ++
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLK 68
Query: 396 AVIKKTDIFDFLVDIIT 412
+++ ++FDFL ++++
Sbjct: 69 HCVERYNVFDFLREVVS 85
>AT5G19490.1 | chr5:6576769-6578273 REVERSE LENGTH=265
Length = 264
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 336 LPLARIKKIMKADEDVKMIAGEAPALFAKACEMFILDMTLRSWQHTEEGRRRTLQRSDVE 395
P RIKKIM+ DE+V IA P L +KA E+F+ D+ ++ T +T+ ++
Sbjct: 9 FPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAKTVNAFHLK 68
Query: 396 AVIKKTDIFDFLVDII 411
++ T++FDFL D +
Sbjct: 69 QCVQATNVFDFLRDTV 84
>AT1G65681.1 | chr1:24428875-24430670 FORWARD LENGTH=224
Length = 223
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 39/123 (31%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRR---------------EGSNPVYFAVLVKYEDLDGDVVQ 45
+A+PG D+LR +G++ +++RR G+NP Y + +V+YE+ DGD+
Sbjct: 95 LARPGQGDRLRSAGVLRVYYRRVECLYRRTNIAFRMDPGANPYYISFVVEYENGDGDLAY 154
Query: 46 VDLMESKSAYGGAIGVWTPMRESWGSASAVTSARPF-----------------VTNNVIP 88
+++ A G + PM+E + ++S P + NVIP
Sbjct: 155 IEIQP-------ADGEFIPMQEMRSAVWKISSGSPLTGPFNIRLTSAESHKVVLAYNVIP 207
Query: 89 AIW 91
A W
Sbjct: 208 ANW 210
>AT2G45110.1 | chr2:18599575-18601237 FORWARD LENGTH=260
Length = 259
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 33/120 (27%)
Query: 1 MAKPGLNDKLRHSGIIDIHFRRE---------------GSNPVYFAVLVKYEDLDGDVVQ 45
+AKPG D+LR +G+I ++++R G+NP Y + +V+YE+ DGD+
Sbjct: 132 LAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSN 191
Query: 46 VDLMESKSAYGGAIGVWTPMRES-WGSASAVTSARPF-------------VTNNVIPAIW 91
V++ + GG+ MR + W S PF V NVIPA W
Sbjct: 192 VEIQPA----GGSFISMQEMRSAVWKVNSGSALRGPFNIRLTSGESHKVIVAYNVIPANW 247
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,645,820
Number of extensions: 256533
Number of successful extensions: 658
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 657
Number of HSP's successfully gapped: 14
Length of query: 484
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 382
Effective length of database: 8,310,137
Effective search space: 3174472334
Effective search space used: 3174472334
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)