BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0199300 Os08g0199300|AK062256
         (394 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30580.1  | chr1:10831953-10835454 REVERSE LENGTH=395          687   0.0  
AT1G56050.1  | chr1:20963793-20966181 FORWARD LENGTH=422          274   5e-74
AT5G18570.1  | chr5:6171839-6174823 REVERSE LENGTH=682             65   5e-11
AT1G07615.1  | chr1:2342277-2344200 REVERSE LENGTH=494             58   1e-08

>AT1G30580.1 | chr1:10831953-10835454 REVERSE LENGTH=395
          Length = 394

 Score =  687 bits (1772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/381 (85%), Positives = 356/381 (93%)

Query: 14  ERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERF 73
           ERPILGRFSSHLKIGIVGLPNVGKST FN +TKLSIPAENFPFCTI+PNEARV +PDERF
Sbjct: 14  ERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERF 73

Query: 74  DWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKE 133
           DWLCQ YKPKSE+ A+LEI+DIAGLVRGAH G+GLGN FLSHIRAVDGIFHVLRAFED +
Sbjct: 74  DWLCQTYKPKSEIPAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDAD 133

Query: 134 VTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKA 193
           + H+DD VDPVRDLETI EELRLKDIEFV  KIDD+EKSMKRSNDKQLK+E EL +KVKA
Sbjct: 134 IIHVDDIVDPVRDLETITEELRLKDIEFVGKKIDDVEKSMKRSNDKQLKIELELLQKVKA 193

Query: 194 HLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQE 253
            LEDGKDVRFGDWK+ADIEILNTFQLL+AKPVVYL+N++E+DYQRKKNKFLPKIHAWVQE
Sbjct: 194 WLEDGKDVRFGDWKTADIEILNTFQLLSAKPVVYLINLNERDYQRKKNKFLPKIHAWVQE 253

Query: 254 HGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFAAIHLIYFFTAGPD 313
           HGG+T+IPFS  FER LADM PDEAAKYC EN++ S +P+IIKTGF+AI+LIYFFTAGPD
Sbjct: 254 HGGDTMIPFSGVFERSLADMAPDEAAKYCEENKLQSALPRIIKTGFSAINLIYFFTAGPD 313

Query: 314 EVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKT 373
           EVKCWQIRRQ+KAPQAAG IHTDFERGFICAEVMKF+DLKELG+E AVKAAGKYRQEGKT
Sbjct: 314 EVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGNEPAVKAAGKYRQEGKT 373

Query: 374 YVVQDGDIIFFKFNVSGGGKK 394
           YVVQDGDIIFFKFNVSGGGKK
Sbjct: 374 YVVQDGDIIFFKFNVSGGGKK 394



>AT1G56050.1 | chr1:20963793-20966181 FORWARD LENGTH=422
          Length = 421

 Score =  274 bits (701), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 148/381 (38%), Positives = 223/381 (58%), Gaps = 8/381 (2%)

Query: 14  ERPILGRFSSHLKIGIVGLPNVGKSTFFN-IVTKLSIPAENFPFCTIDPNEARVYVPDER 72
           +R    + S  LK GIVGLPNVGKST FN +V      A NFPFCTI+PN   V VPD R
Sbjct: 43  KRCFSSKVSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSR 102

Query: 73  FDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDK 132
              L +L   +  V A +E  DIAGLV+GA  GEGLGN FLSHIR VD I  V+R FED 
Sbjct: 103 LQVLSKLSGSQKTVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDN 162

Query: 133 EVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHE--LCEK 190
           ++ H++  VDP  D++ I  EL   D++ +  +I+ L+K   + +  ++K E E    E+
Sbjct: 163 DIIHVNGKVDPKSDIDVINLELIFCDLDQIGKRIERLKKGKAKDSQSKVKEEAEKSALER 222

Query: 191 VKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDY-QRKKNKFLPKIHA 249
           ++  L +GK  R       ++E++    LLT KP++Y+ N++E D  + +KN ++ ++  
Sbjct: 223 IQEALLEGKPARSVALSDLEMEVVKHLCLLTMKPMIYVANVAETDLAEPEKNAYVEEVKG 282

Query: 250 WVQE-HGGETIIPFSCAFERLLADMPPDEAAKYCAENQIA-SVIPKIIKTGFAAIHLIYF 307
              +   G  ++  S   E  L ++P +E  +Y     ++ S +  +I+  ++ + L  +
Sbjct: 283 LSSDLQSGHVVV--SAQVESELTELPLEERTEYLNSLGVSESGLGNLIRATYSLLGLQTY 340

Query: 308 FTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKY 367
           FT+G  E + W I     APQAAG IH+DFE+GFI AE + ++D    GS +A +  G  
Sbjct: 341 FTSGEKETRAWTIHAGMTAPQAAGVIHSDFEKGFIRAETVAYEDFVTAGSIAAAREKGLL 400

Query: 368 RQEGKTYVVQDGDIIFFKFNV 388
           R EGK Y+V++GD++ F+FNV
Sbjct: 401 RSEGKEYIVKEGDVMLFRFNV 421



>AT5G18570.1 | chr5:6171839-6174823 REVERSE LENGTH=682
          Length = 681

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 21/142 (14%)

Query: 27  IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86
           +GIVG PN GKST  ++++       N+PF T+ PN   V      FD+           
Sbjct: 381 VGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVV-----SFDY----------- 424

Query: 87  SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVR- 145
            + + + D+ GL+ GAH G GLG+ FL H      + HV+    D      +   + VR 
Sbjct: 425 DSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHVV----DGSAPQPELEFEAVRL 480

Query: 146 DLETIGEELRLKDIEFVQNKID 167
           +LE    E+  K      NK+D
Sbjct: 481 ELELFSPEIAEKPYVVAYNKMD 502



>AT1G07615.1 | chr1:2342277-2344200 REVERSE LENGTH=494
          Length = 493

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 21/146 (14%)

Query: 27  IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86
           +G+VG+PN GKST    +++      ++ F T+ PN   V   D                
Sbjct: 306 VGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGNVNYDD---------------- 349

Query: 87  SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKE----VTHIDDSVD 142
              + + DI GL++GAH   GLG+ FL HI     + +V+      +    +T      D
Sbjct: 350 -FSMTVADIPGLIKGAHQNRGLGHNFLRHIERTKVLAYVVDLASGLDGCEGLTPWQQLRD 408

Query: 143 PVRDLETIGEELRLKDIEFVQNKIDD 168
            V +LE   E L  +    V NKID+
Sbjct: 409 LVMELEFHEEGLSDRSSLIVANKIDE 434



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.139    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,865,800
Number of extensions: 393272
Number of successful extensions: 1278
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1275
Number of HSP's successfully gapped: 4
Length of query: 394
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 293
Effective length of database: 8,337,553
Effective search space: 2442903029
Effective search space used: 2442903029
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)