BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0193900 Os08g0193900|AK107386
(396 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G05460.1 | chr4:2761106-2762400 REVERSE LENGTH=303 164 6e-41
AT4G05475.1 | chr4:2765962-2767957 REVERSE LENGTH=310 136 2e-32
AT4G05490.1 | chr4:2771044-2772252 REVERSE LENGTH=308 132 3e-31
AT4G05497.1 | chr4:2777903-2778801 REVERSE LENGTH=247 127 1e-29
AT4G05470.1 | chr4:2763256-2765351 REVERSE LENGTH=305 120 1e-27
AT4G03630.1 | chr4:1608750-1610037 FORWARD LENGTH=221 108 4e-24
AT5G52480.1 | chr5:21296918-21297762 REVERSE LENGTH=242 94 2e-19
AT4G08980.1 | chr4:5758993-5760108 FORWARD LENGTH=318 80 2e-15
AT3G48880.1 | chr3:18127873-18129008 FORWARD LENGTH=310 54 1e-07
>AT4G05460.1 | chr4:2761106-2762400 REVERSE LENGTH=303
Length = 302
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 151/284 (53%), Gaps = 18/284 (6%)
Query: 86 GDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADL 145
G++ +W LP + AI H+L IEIL A +VCRSWRR +D P +WR+IDM DL
Sbjct: 14 GESTNWTE-LPPELTSAILHRLGAIEILENAQKVCRSWRRVCKD-PSMWRKIDMHNLGDL 71
Query: 146 S-FELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNE 204
+ NL M + AV RS G Y LL+++ R+ +++SLRLI C I ++
Sbjct: 72 DDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDD 131
Query: 205 GFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEMD 264
GF A+ K P CS ES +VG+ C +K + +K + E D
Sbjct: 132 GFVEAVVKLPLEELELSY-CSFSVES--LRVVGQCCLNMKTLKLNKH-------PQKEND 181
Query: 265 EEALGIA-TMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDTLRAKC- 322
++AL IA TM +LR LQL N L + GL AILDNC LE LD+R CFNVN+ L+ +C
Sbjct: 182 DDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCF 241
Query: 323 ARIKTLRLPYDSTDDYDFQVQKPISLADFYSDSDDDCVYGGPDY 366
+K +R P DS D D + D Y SD D + G D+
Sbjct: 242 ESVKVVRHPNDSIHDIDIGSSED---EDPYDFSDIDLMSGDDDF 282
>AT4G05475.1 | chr4:2765962-2767957 REVERSE LENGTH=310
Length = 309
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 143/267 (53%), Gaps = 25/267 (9%)
Query: 90 DWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFEL 149
+W LP + +I +L +IL A ++CR+WRR +D P +WR+I++R L +E
Sbjct: 39 NWVD-LPPELTTSILLRLSVTDILDNARKLCRAWRRICKD-PSMWRKINLRDC--LMYEF 94
Query: 150 NLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYD-ILNEGFSA 208
+ M + V S G E+ + LL ++ +R+ ++KSL IS Y+ + N+G
Sbjct: 95 DFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLG-ISIYEPMTNKGVMN 153
Query: 209 AIKKFPXXXXXXXXXCSNIGESNV---FEIVGKACPQLKRFRFSK---DCFYSFEDNEY- 261
I+K P I S++ + +G ACPQLK + + + + Y
Sbjct: 154 GIEKLPLLETLV------IFHSSIKLDLKAIGHACPQLKTLKLNSLGSELAHDISQVGYI 207
Query: 262 ---EMDEEALGIA-TMHELRSLQLFANNLRNEGLAAILDNCPYLES-LDIRHCFNVNMDD 316
E D++AL IA +M +LR LQL N L N GL AILD CP+LE LD+R CFN+N+
Sbjct: 208 PLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVG 267
Query: 317 TLRAKCA-RIKTLRLPYDSTDDYDFQV 342
L +C RIK LR P+DST DY + +
Sbjct: 268 NLEKRCMKRIKELRRPHDSTADYPYSI 294
>AT4G05490.1 | chr4:2771044-2772252 REVERSE LENGTH=308
Length = 307
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 140/266 (52%), Gaps = 22/266 (8%)
Query: 85 EGDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHAD 144
E +WA LP D + +I +L +EIL A +VCRSWRR ++D P +WRRIDMR +
Sbjct: 21 EEKPSNWAE-LPPDLLSSILLRLSPLEILENARKVCRSWRRVSKD-PLIWRRIDMR---N 75
Query: 145 LSFELNLFGMAQAAVRRSAGQCEAFWGEYAADE------KLLHFLGERAPSVKSLRLISC 198
L ++ M +A R + E+ D+ LL+++ ER+ +++ LR +
Sbjct: 76 LRRLYCIYAM-EACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKG 133
Query: 199 YDILNEGFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFED 258
I + G AI K P CS E F+ +G+ACP LK + F
Sbjct: 134 GQITSVGIFEAIVKLPLLEELELLYCS--IEEEHFKTIGQACPNLKTLKL-----VGFWS 186
Query: 259 NEYEMDEEALGIA-TMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDT 317
+ E D +AL IA TM L LQL +N L N GL AILD CP+LE LD+R CFN+N+
Sbjct: 187 HLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGD 246
Query: 318 LRAKC-ARIKTLRLPYDSTDDYDFQV 342
L +C RIK R P D DDY++ +
Sbjct: 247 LERQCLERIKDFRCPNDVLDDYNYVI 272
>AT4G05497.1 | chr4:2777903-2778801 REVERSE LENGTH=247
Length = 246
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 126/236 (53%), Gaps = 14/236 (5%)
Query: 84 KEGDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHA 143
K G+ R+WA LP + +I +L IEIL A +VC+SWRR +D P +WR+ID+R
Sbjct: 14 KNGEYRNWAE-LPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQD-PSMWRKIDIRIKE 71
Query: 144 DLSFELNLFGMAQA----AVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCY 199
+L + LF + + AV S G +Y + L+++ +R+ +++ L ++ C
Sbjct: 72 NLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCA 131
Query: 200 DILNEGFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDN 259
+L+ G A K P S+I E ++VG++CP L+ + +C +
Sbjct: 132 PVLSRGVVEAAMKLPLLEELDITYKSSIREQE-LKVVGQSCPNLRTLKL--NCTGDVKC- 187
Query: 260 EYEMDEEALGIA-TMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNM 314
D+ AL IA TM LR LQLF N L GL AIL+ CP+L++L + C N+N+
Sbjct: 188 ---CDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINI 240
>AT4G05470.1 | chr4:2763256-2765351 REVERSE LENGTH=305
Length = 304
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 132/269 (49%), Gaps = 26/269 (9%)
Query: 89 RDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFE 148
R+W LP + +I +L +IL A +VC+ WRR +D P +WR+I+ R L +
Sbjct: 44 RNWVD-LPPELTTSILLRLSLTDILDNAQKVCKEWRRICKD-PSMWRKINTRDC--LMYN 99
Query: 149 LNLFGMAQAAVRRS-AGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYD-ILNEGF 206
+ M + V S G E E+ + LL ++ +R +++SL L C+ + G
Sbjct: 100 FDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDR--NLRSLGLGMCFPRVTKLGV 157
Query: 207 SAAIKKFPXXXXX-XXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEY---- 261
AI K P C + + +G ACPQLK + + ++Y
Sbjct: 158 VNAIAKIPLLETLEVTHSCIKLD----LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNV 213
Query: 262 -------EMDEEALGIA-TMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVN 313
E D++AL IA +M +L LQL AN L N GL AILD CP+LE LD+R CF ++
Sbjct: 214 LDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRIS 273
Query: 314 MDDTLRAKCAR-IKTLRLPYDSTDDYDFQ 341
+ L +C IK LR P DST DY +
Sbjct: 274 LVGNLEKRCLEMIKELRRPGDSTADYPYN 302
>AT4G03630.1 | chr4:1608750-1610037 FORWARD LENGTH=221
Length = 220
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 154 MAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNEGFSAAIKKF 213
M AV S G C E+ + LL ++ +R+ +++ L L C I G K
Sbjct: 28 MMCHAVALSQGGCVEINIEHFGTDSLLTYIADRSSNLRHLGLAKCDQITGMGLFTEAMKL 87
Query: 214 PXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEMDEEALGIAT- 272
P C G++ E +G AC LK + + F+ + D +ALGIA
Sbjct: 88 PLLEDLELSYCLIKGKN--LEAIGFACLHLKTLKLNCQ---GFKFPGFTYDHDALGIAKR 142
Query: 273 MHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDTLRAKCA-RIKTLRLP 331
M ELR LQLF N + + GL AI D CP+LE LD+R CFN+N+ L +C RIK LR P
Sbjct: 143 MPELRCLQLFGNRVSDVGLNAIFDGCPHLEHLDLRQCFNINLVGDLEKRCMERIKDLRRP 202
Query: 332 YDSTDDYDF 340
DST DY +
Sbjct: 203 NDSTADYPY 211
>AT5G52480.1 | chr5:21296918-21297762 REVERSE LENGTH=242
Length = 241
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 156 QAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNEGFSAAIKKFPX 215
A R G E G++ +D LL ++ ER+ +++SLRL+ C +I ++GF A+ K P
Sbjct: 21 NAVDRSEGGLLEINIGDFGSD-SLLTYIAERSSNLRSLRLM-CSEITDDGFVQAVVKLPM 78
Query: 216 XXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEMDEEALGIATMHE 275
S GES ++ G +CP LK ++ + S ++ + + +M +
Sbjct: 79 LEELEVSGISLSGES--MKLAGLSCPNLKTLMLNRLFYLS---SDDDDHDAIAIAESMPK 133
Query: 276 LRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDTLRAKC-ARIKTLRLPYDS 334
LR LQL N L GL AILD CP+LE LD+R C +N+ L +C +IK LR DS
Sbjct: 134 LRHLQLCGNKLTKTGLNAILDGCPHLEHLDLRQC--INLVGNLEKRCFEKIKDLRRHNDS 191
Query: 335 TD-DYDFQVQ 343
T DY F +
Sbjct: 192 TSADYPFSFE 201
>AT4G08980.1 | chr4:5758993-5760108 FORWARD LENGTH=318
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 19/276 (6%)
Query: 89 RDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFE 148
R W +P DA+ IF L E+L +VC++W RA P W+ ID+ ++ +
Sbjct: 8 RHWDELIP-DALGLIFSHLPLQEVLTVVPRVCKAWNRAVTG-PYCWQEIDIELWSNRFHQ 65
Query: 149 L-NLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNEGFS 207
+L M + + RSAG ++ + F+ + A S+K+L+ + + N G
Sbjct: 66 SDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLK-VPRSGLTNSGVV 124
Query: 208 AAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEMDEEA 267
+K C IG + + +GK C L+ F ++ + D+EA
Sbjct: 125 NVAEKLSSLTFLDLSYCCKIGPEAI-QAIGKHCKSLREF--CRNMHPLDVASVVSHDDEA 181
Query: 268 LGIA-TMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDT-LRAKCARI 325
IA TM +L+ L++ + + EG+ IL C +LE L++R C++V +D+ + K +
Sbjct: 182 YAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDM 241
Query: 326 KTL--RLP--YDSTDDYDFQVQKPISLADFYSDSDD 357
K L R+ YD +D++ +D++SD D
Sbjct: 242 KVLGPRVIGFYDMINDWE------DCCSDYFSDGSD 271
>AT3G48880.1 | chr3:18127873-18129008 FORWARD LENGTH=310
Length = 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 44/263 (16%)
Query: 95 LPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFEL----- 149
L D ++ IF K E+ G VCR WR A D P LW+ +D+ ++
Sbjct: 16 LDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCD-PILWKTVDLSNMRSSFIKIPLEPY 74
Query: 150 ---------NLFGMAQAAVRRSAGQCEAF---WGEYAADEKLLHFLGERAPSVKSLRLIS 197
L + + ++ S G + + +D++ L + ER P ++ + L +
Sbjct: 75 VYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQ-LTYTAERCPGLRRVVLPA 133
Query: 198 CYDILNEGFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFE 257
I G AI+ + +N + + K C K + F F
Sbjct: 134 WNRIKKTGICKAIRIWKDLESLTMPSIAN--PPYLLTEIAKNCKNFKELKIMGP-FEVFF 190
Query: 258 DNEYEMDEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNV----- 312
N I + +++L + + ++ E L ILD P LE L+I H V
Sbjct: 191 ANTL--------ITCLPNIKTLSIRCSAIKREALMKILDGLPSLEVLNISHSHLVEYSGW 242
Query: 313 ---------NMDDTLRAKCARIK 326
+D T+ K AR+K
Sbjct: 243 QPQQKVIVRELDKTIMEKTARLK 265
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.140 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,714,979
Number of extensions: 311138
Number of successful extensions: 899
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 884
Number of HSP's successfully gapped: 9
Length of query: 396
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 295
Effective length of database: 8,337,553
Effective search space: 2459578135
Effective search space used: 2459578135
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)