BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0193600 Os08g0193600|Os08g0193600
(484 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G05460.1 | chr4:2761106-2762400 REVERSE LENGTH=303 152 4e-37
AT4G05475.1 | chr4:2765962-2767957 REVERSE LENGTH=310 121 8e-28
AT4G05470.1 | chr4:2763256-2765351 REVERSE LENGTH=305 117 1e-26
AT4G03630.1 | chr4:1608750-1610037 FORWARD LENGTH=221 114 8e-26
AT4G05490.1 | chr4:2771044-2772252 REVERSE LENGTH=308 112 4e-25
AT4G05497.1 | chr4:2777903-2778801 REVERSE LENGTH=247 112 5e-25
AT5G52480.1 | chr5:21296918-21297762 REVERSE LENGTH=242 94 2e-19
AT4G08980.1 | chr4:5758993-5760108 FORWARD LENGTH=318 68 1e-11
AT5G57900.1 | chr5:23449916-23450915 REVERSE LENGTH=301 56 5e-08
AT4G15475.1 | chr4:8845927-8848701 FORWARD LENGTH=611 48 1e-05
>AT4G05460.1 | chr4:2761106-2762400 REVERSE LENGTH=303
Length = 302
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 145/278 (52%), Gaps = 44/278 (15%)
Query: 143 LPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELS-FELNLFG 201
LP E A+L +L +EIL A +VCR+WRR +D P +WR+IDM N +L + NL
Sbjct: 22 LPPELTSAILHRLGAIEILENAQKVCRSWRRVCKD-PSMWRKIDMHNLGDLDDMDYNLEI 80
Query: 202 MAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAM-IIRFLTIVYE 260
M + AV RS G + I G+W + ++ ++
Sbjct: 81 MCRHAVDRSQGG-------------------LVDI------GIWYFGTVDLLNYIA---- 111
Query: 261 KRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACPQLK 320
R+ L+SLRLI C I D+GF AV K PL EELEL+ C E+ + VG+ C +K
Sbjct: 112 HRSSNLRSLRLIRCSQITDDGFVEAVVKLPL-EELELSYCSFSVES--LRVVGQCCLNMK 168
Query: 321 RFRLSKRCFYNYKHSGYNKDEQALGIA-TMHELSSLQLFANNLSNEGLTAILDNCPFLES 379
+L+K H D+ AL IA TM +L LQL N LS+ GL AILDNC LE
Sbjct: 169 TLKLNK-------HPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEH 221
Query: 380 LDIRHCFNVSMDDTLQAKC-ARIKTLRLPYDSTDDYDF 416
LD+R CFNV++ LQ +C +K +R P DS D D
Sbjct: 222 LDLRRCFNVNLVGDLQKRCFESVKVVRHPNDSIHDIDI 259
>AT4G05475.1 | chr4:2765962-2767957 REVERSE LENGTH=310
Length = 309
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 144/291 (49%), Gaps = 45/291 (15%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
+W LP E ++L +L +IL A ++CRAWRR +D P +WR+I++ + L +E
Sbjct: 39 NWV-DLPPELTTSILLRLSVTDILDNARKLCRAWRRICKD-PSMWRKINLRDC--LMYEF 94
Query: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTI 257
+ M + V S G E+ +S + + I
Sbjct: 95 DFESMCRHIVDLSQGGLLEINIEHF------VSDSLLSYIVD------------------ 130
Query: 258 VYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACP 317
R+ LKSL + + ++G ++K PLLE L + ++ + KA+G ACP
Sbjct: 131 ----RSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETL-VIFHSSIKLD--LKAIGHACP 183
Query: 318 QLKRFRLSK---RCFYNYKHSGY----NKDEQALGIA-TMHELSSLQLFANNLSNEGLTA 369
QLK +L+ ++ GY D+ AL IA +M +L LQL N L+N GL A
Sbjct: 184 QLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNA 243
Query: 370 ILDNCPFLES-LDIRHCFNVSMDDTLQAKC-ARIKTLRLPYDSTDDYDFQV 418
ILD CP LE LD+R CFN+++ L+ +C RIK LR P+DST DY + +
Sbjct: 244 ILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKELRRPHDSTADYPYSI 294
>AT4G05470.1 | chr4:2763256-2765351 REVERSE LENGTH=305
Length = 304
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 135/291 (46%), Gaps = 53/291 (18%)
Query: 143 LPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFELNLFGM 202
LP E ++L +L +IL A +VC+ WRR +D P +WR+I+ + L + + M
Sbjct: 49 LPPELTTSILLRLSLTDILDNAQKVCKEWRRICKD-PSMWRKINTRDC--LMYNFDFVSM 105
Query: 203 AQAAVRRS-AGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTIVYEK 261
+ V S G E E+ +S + + I +
Sbjct: 106 CRHIVDLSQGGLLEINVDEHF------LSDSLLSYITDRN-------------------- 139
Query: 262 RAPCLKSLRLISCF-DILDEGFSAAVKKFPLLEELELT-LCDNLGENDVFKAVGKACPQL 319
L+SL L CF + G A+ K PLLE LE+T C L KA+G ACPQL
Sbjct: 140 ----LRSLGLGMCFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLD----LKAIGHACPQL 191
Query: 320 KRFRLSKRCFYNYKHSGYNK-----------DEQALGIA-TMHELSSLQLFANNLSNEGL 367
K +L+ Y+ D+ AL IA +M +L LQL AN L+N GL
Sbjct: 192 KTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGL 251
Query: 368 TAILDNCPFLESLDIRHCFNVSMDDTLQAKCAR-IKTLRLPYDSTDDYDFQ 417
AILD CP LE LD+R CF +S+ L+ +C IK LR P DST DY +
Sbjct: 252 NAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELRRPGDSTADYPYN 302
>AT4G03630.1 | chr4:1608750-1610037 FORWARD LENGTH=221
Length = 220
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 91/157 (57%), Gaps = 7/157 (4%)
Query: 262 RAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACPQLKR 321
R+ L+ L L C I G K PLLE+LEL+ C G+N +A+G AC LK
Sbjct: 60 RSSNLRHLGLAKCDQITGMGLFTEAMKLPLLEDLELSYCLIKGKN--LEAIGFACLHLKT 117
Query: 322 FRLSKRCFYNYKHSGYNKDEQALGIAT-MHELSSLQLFANNLSNEGLTAILDNCPFLESL 380
+L+ + F K G+ D ALGIA M EL LQLF N +S+ GL AI D CP LE L
Sbjct: 118 LKLNCQGF---KFPGFTYDHDALGIAKRMPELRCLQLFGNRVSDVGLNAIFDGCPHLEHL 174
Query: 381 DIRHCFNVSMDDTLQAKCA-RIKTLRLPYDSTDDYDF 416
D+R CFN+++ L+ +C RIK LR P DST DY +
Sbjct: 175 DLRQCFNINLVGDLEKRCMERIKDLRRPNDSTADYPY 211
>AT4G05490.1 | chr4:2771044-2772252 REVERSE LENGTH=308
Length = 307
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 144/283 (50%), Gaps = 38/283 (13%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
+WA LP + + ++L +L +EIL A +VCR+WRR ++D P +WRRIDM N L
Sbjct: 26 NWAE-LPPDLLSSILLRLSPLEILENARKVCRSWRRVSKD-PLIWRRIDMRNLRRLYCIY 83
Query: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTI 257
+ + V S G F + + S+ + +A
Sbjct: 84 AMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMA----------------------- 120
Query: 258 VYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACP 317
+R+ L+ LR + I G A+ K PLLEELEL C E + FK +G+ACP
Sbjct: 121 ---ERSSNLRRLR-VKGGQITSVGIFEAIVKLPLLEELELLYCS--IEEEHFKTIGQACP 174
Query: 318 QLKRFRLSKRCFYNYKHSGYNKDEQALGIA-TMHELSSLQLFANNLSNEGLTAILDNCPF 376
LK +L F+++ + D AL IA TM L LQL +N L+N GL AILD CP
Sbjct: 175 NLKTLKLVG--FWSHLNE---SDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPH 229
Query: 377 LESLDIRHCFNVSMDDTLQAKC-ARIKTLRLPYDSTDDYDFQV 418
LE LD+R CFN+++ L+ +C RIK R P D DDY++ +
Sbjct: 230 LECLDLRQCFNINLFGDLERQCLERIKDFRCPNDVLDDYNYVI 272
>AT4G05497.1 | chr4:2777903-2778801 REVERSE LENGTH=247
Length = 246
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 128/254 (50%), Gaps = 34/254 (13%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
+WA LP E ++L +L +EIL A +VC++WRR +D P +WR+ID+ L +
Sbjct: 20 NWAE-LPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQD-PSMWRKIDIRIKENLVNSV 77
Query: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTI 257
LF Y +C + +++ + + D + FL
Sbjct: 78 ELF--------------------YVIEPLCCRAVDLSQ---GGLLEINIDYLVNTSFLNY 114
Query: 258 VYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACP 317
+ + R+ L+ L ++ C +L G A K PLLEEL++T ++ E + K VG++CP
Sbjct: 115 IAD-RSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQE-LKVVGQSCP 172
Query: 318 QLKRFRLSKRCFYNYKHSGYNKDEQALGIA-TMHELSSLQLFANNLSNEGLTAILDNCPF 376
L+ +L+ C + K D+ AL IA TM L LQLF N LS GL AIL+ CP
Sbjct: 173 NLRTLKLN--CTGDVKCC----DKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPH 226
Query: 377 LESLDIRHCFNVSM 390
L++L + C N+++
Sbjct: 227 LKNLGLHQCLNINI 240
>AT5G52480.1 | chr5:21296918-21297762 REVERSE LENGTH=242
Length = 241
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 92/165 (55%), Gaps = 11/165 (6%)
Query: 254 FLTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVG 313
LT + E R+ L+SLRL+ C +I D+GF AV K P+LEELE++ GE+ K G
Sbjct: 43 LLTYIAE-RSSNLRSLRLM-CSEITDDGFVQAVVKLPMLEELEVSGISLSGES--MKLAG 98
Query: 314 KACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFANNLSNEGLTAILDN 373
+CP LK L+ R FY S + + +M +L LQL N L+ GL AILD
Sbjct: 99 LSCPNLKTLMLN-RLFY--LSSDDDDHDAIAIAESMPKLRHLQLCGNKLTKTGLNAILDG 155
Query: 374 CPFLESLDIRHCFNVSMDDTLQAKC-ARIKTLRLPYDSTD-DYDF 416
CP LE LD+R C N+ L+ +C +IK LR DST DY F
Sbjct: 156 CPHLEHLDLRQCINLV--GNLEKRCFEKIKDLRRHNDSTSADYPF 198
>AT4G08980.1 | chr4:5758993-5760108 FORWARD LENGTH=318
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 36/258 (13%)
Query: 139 WAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDM-LNHAELSFEL 197
W +P +A+ + L E+L +VC+AW RA P W+ ID+ L
Sbjct: 10 WDELIP-DALGLIFSHLPLQEVLTVVPRVCKAWNRAVTG-PYCWQEIDIELWSNRFHQSD 67
Query: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTI 257
+L M + + RSAG +TGL D+ I F+
Sbjct: 68 HLDRMLEMLIPRSAGSLRKL----------------------SVTGLRNDS--IFSFIA- 102
Query: 258 VYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACP 317
+ A LK+L++ + + G +K L L+L+ C +G + +A+GK C
Sbjct: 103 ---QHAGSLKTLKVPRS-GLTNSGVVNVAEKLSSLTFLDLSYCCKIGP-EAIQAIGKHCK 157
Query: 318 QLKRFRLSKRCFYNYKHSGYNKDEQALGIA-TMHELSSLQLFANNLSNEGLTAILDNCPF 376
L+ F + S + D++A IA TM +L L++ + +S EG+ IL C F
Sbjct: 158 SLREF--CRNMHPLDVASVVSHDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVF 215
Query: 377 LESLDIRHCFNVSMDDTL 394
LE L++R C++V +D+
Sbjct: 216 LEFLELRGCWDVQLDNKF 233
>AT5G57900.1 | chr5:23449916-23450915 REVERSE LENGTH=301
Length = 300
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 118/292 (40%), Gaps = 60/292 (20%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDM---------- 187
DW GL E ++ ++ +L E+ G V ++W RD P LW D+
Sbjct: 7 DWG-GLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRD-PYLWSIFDLEPWFDSYPES 64
Query: 188 LNHAELSFELNLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGD 247
+ FE + M ++ V W E TKI + Y+
Sbjct: 65 THLWSPEFEQKVDLMLRSVVD---------WSEGGLTKIRVRHCSDHALSYAA------- 108
Query: 248 AAMIIRFLTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGEND 307
R P L+ L + S ++ D + + L+EL+++ C + +D
Sbjct: 109 -------------DRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEIS-HD 154
Query: 308 VFKAVGKACPQLKRFRLSKRCFYNY--KHSG-----------YNKDEQALGIAT-MHELS 353
+G+ CP L R+ KR ++ +H G + D +A I M L
Sbjct: 155 TLVMIGRNCPNL---RILKRNLMDWSSRHIGSVPTEYLDACPQDGDTEADAIGKHMINLE 211
Query: 354 SLQLFANNLSNEGLTAILDNCPFLESLDIRHCFNVSMDDTLQAKCARIKTLR 405
L++ + LS +GL +I + CP LE LD+ C ++S D + + +R+K L+
Sbjct: 212 HLEIQFSRLSVKGLASICEGCPKLEYLDLFGCVHLSSRD-ITSNVSRLKWLK 262
>AT4G15475.1 | chr4:8845927-8848701 FORWARD LENGTH=611
Length = 610
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 266 LKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACPQLKRFRLS 325
LK L + C++I ++G + K L EL L CD +G N A+GK C L++ +S
Sbjct: 426 LKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVG-NKALIAIGKGCS-LQQLNVS 483
Query: 326 KRCFYNYKHSGYNKDEQALGIATMHELSSLQLFANNLSNEGLTAILDNCPFLESLDIRHC 385
+G + T ++S LQ N+ + L + + CP L+ L + HC
Sbjct: 484 G--CNQISDAGITAIARGCPQLTHLDISVLQ----NIGDMPLAELGEGCPMLKDLVLSHC 537
Query: 386 FNVSMD--DTLQAKCARIKTLRLPY 408
+++ + + L KC ++T + Y
Sbjct: 538 HHITDNGLNHLVQKCKLLETCHMVY 562
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,839,705
Number of extensions: 328933
Number of successful extensions: 945
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 934
Number of HSP's successfully gapped: 12
Length of query: 484
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 382
Effective length of database: 8,310,137
Effective search space: 3174472334
Effective search space used: 3174472334
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)