BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0191600 Os08g0191600|AK121169
(120 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62040.2 | chr1:22932782-22934253 FORWARD LENGTH=134 229 3e-61
AT4G21980.2 | chr4:11655868-11656809 FORWARD LENGTH=138 215 3e-57
AT4G04620.1 | chr4:2328663-2329926 REVERSE LENGTH=123 207 9e-55
AT4G16520.1 | chr4:9306882-9308113 REVERSE LENGTH=122 206 2e-54
AT2G05630.2 | chr2:2083211-2084775 REVERSE LENGTH=165 201 5e-53
AT3G60640.1 | chr3:22416118-22416971 FORWARD LENGTH=122 196 3e-51
AT2G45170.1 | chr2:18624545-18625526 FORWARD LENGTH=123 193 2e-50
AT3G15580.1 | chr3:5274075-5275000 REVERSE LENGTH=116 142 5e-35
AT3G06420.1 | chr3:1955219-1956274 REVERSE LENGTH=120 136 3e-33
>AT1G62040.2 | chr1:22932782-22934253 FORWARD LENGTH=134
Length = 133
Score = 229 bits (583), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/118 (91%), Positives = 116/118 (98%)
Query: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60
MA SSFKLEHPLERRQ E++RIREKYPDRIPVIVE+AERSD+P+IDKKKYLVPADLTVGQ
Sbjct: 15 MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74
Query: 61 FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGL 118
FVYVVRKRIKLSAEKAIF+FVKNTLPPTAA+MSAIY+ENKDEDGFLYMTYSGENTFGL
Sbjct: 75 FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFGL 132
>AT4G21980.2 | chr4:11655868-11656809 FORWARD LENGTH=138
Length = 137
Score = 215 bits (548), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/117 (87%), Positives = 112/117 (95%)
Query: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60
MA+SSFK+ +PLE R +E++RIREKYPDRIPVIVEKA +SD+PDIDKKKYLVPADLTVGQ
Sbjct: 16 MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75
Query: 61 FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
FVYVVRKRIKL AEKAIF+FVKNTLPPTAALMSAIYEE+KDEDGFLYMTYSGENTFG
Sbjct: 76 FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 132
>AT4G04620.1 | chr4:2328663-2329926 REVERSE LENGTH=123
Length = 122
Score = 207 bits (527), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 98/117 (83%), Positives = 109/117 (93%)
Query: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60
M ++SFKL +PLE R AE+ RIR KYP+R+PVIVEKA +SD+PDIDKKKYLVPADLT+GQ
Sbjct: 1 MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQ 60
Query: 61 FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
FVYVVRKRIKL AEKAIF+FVKNTLPPTAALMSAIYEE+KDEDGFLYMTYSGENTFG
Sbjct: 61 FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117
>AT4G16520.1 | chr4:9306882-9308113 REVERSE LENGTH=122
Length = 121
Score = 206 bits (524), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/118 (83%), Positives = 108/118 (91%)
Query: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60
MA+SSFK EH LE+R+AEA RIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQ
Sbjct: 1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60
Query: 61 FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGL 118
FVYV+RKRIKLSAEKAIFIFV N LPP ALMS++YEE KD+DGFLY+TYSGENTFG
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118
>AT2G05630.2 | chr2:2083211-2084775 REVERSE LENGTH=165
Length = 164
Score = 201 bits (512), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 95/108 (87%), Positives = 105/108 (97%)
Query: 12 LERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKL 71
L++RQAEA RIREKYPDRIPVIVE+AE+SD+PDID+KKYLVPADLTVGQFVYVVRKRIKL
Sbjct: 56 LKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKL 115
Query: 72 SAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLF 119
S EKAIFIFVKN LPPTAA+MSAIYEE+KDEDGFLYM+YSGENTFG+F
Sbjct: 116 SPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIF 163
>AT3G60640.1 | chr3:22416118-22416971 FORWARD LENGTH=122
Length = 121
Score = 196 bits (497), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 91/117 (77%), Positives = 106/117 (90%)
Query: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60
M+ SF+ +H E+R+AEA RIREKY DR+PVIVEK+E+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1 MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60
Query: 61 FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
FVYV+RKRI+LSAEKAIFIFV N LPPT A+MS IY+ENK+EDGFLY+TYSGENTFG
Sbjct: 61 FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFG 117
>AT2G45170.1 | chr2:18624545-18625526 FORWARD LENGTH=123
Length = 122
Score = 193 bits (490), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 105/114 (92%)
Query: 4 SSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVY 63
S FK+++ E+R+AEA RIREKYPDRIPVIVEKAE+S++P+IDKKKYLVP+DLTVGQFVY
Sbjct: 5 SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64
Query: 64 VVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
V+RKRIKLSAEKAIFIFV N LPPT LMS++YE+ KDEDGFLY+TYSGENTFG
Sbjct: 65 VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>AT3G15580.1 | chr3:5274075-5275000 REVERSE LENGTH=116
Length = 115
Score = 142 bits (357), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 86/113 (76%)
Query: 5 SFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYV 64
SFK ++ L+ R AE+ I KYP RIPVI EK ++D+P I+KKK+LVP D++VGQF+Y+
Sbjct: 3 SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYI 62
Query: 65 VRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
+ R+ LS KA+F+FV NTLP TAALM ++YE KD+DGF+YM YS E TFG
Sbjct: 63 LSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115
>AT3G06420.1 | chr3:1955219-1956274 REVERSE LENGTH=120
Length = 119
Score = 136 bits (342), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 83/113 (73%)
Query: 5 SFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYV 64
SFK + + R E+N I KYPDRIPVI+EK +D+PD++K KYLVP D+TVG F+++
Sbjct: 7 SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHM 66
Query: 65 VRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
+ KR++L KA+F+FV NTLP TA+ M ++Y K+EDGFLYM YS E TFG
Sbjct: 67 LSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.137 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,515,780
Number of extensions: 92486
Number of successful extensions: 274
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 274
Number of HSP's successfully gapped: 9
Length of query: 120
Length of database: 11,106,569
Length adjustment: 86
Effective length of query: 34
Effective length of database: 8,748,793
Effective search space: 297458962
Effective search space used: 297458962
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 105 (45.1 bits)