BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0158500 Os08g0158500|AK060393
(377 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27585.1 | chr4:13766984-13769832 REVERSE LENGTH=412 417 e-117
AT5G54100.1 | chr5:21954035-21956500 REVERSE LENGTH=402 412 e-115
AT3G01290.1 | chr3:88252-89356 REVERSE LENGTH=286 75 8e-14
AT5G51570.1 | chr5:20949511-20951234 FORWARD LENGTH=293 66 3e-11
AT1G69840.1 | chr1:26293932-26295150 REVERSE LENGTH=287 62 4e-10
AT5G62740.1 | chr5:25201320-25202535 FORWARD LENGTH=287 59 4e-09
>AT4G27585.1 | chr4:13766984-13769832 REVERSE LENGTH=412
Length = 411
Score = 417 bits (1071), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/291 (68%), Positives = 236/291 (81%), Gaps = 22/291 (7%)
Query: 49 LSTPVNWGVSIVPEKKAFVVERFGKYVKTLGSGIHVLVPLVDRIAYVHSLKEEAIPIPDQ 108
L+ P NWG+ IVPE+KAFV+ERFGKY TL SGIH L+P VDRIAYVHSLKEEAIPIP+Q
Sbjct: 55 LTPPTNWGIRIVPERKAFVIERFGKYATTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPNQ 114
Query: 109 SAITKDNVSIQIDGVLYVKIVDPYLASYGVENPIFAVIQLAQTTMRSELGKITLDKTFEE 168
+AITKDNVSI IDGVLYVKIVDP LASYGVE+PI+AV+QLAQTTMRSELGKITLDKTFEE
Sbjct: 115 TAITKDNVSIHIDGVLYVKIVDPKLASYGVESPIYAVVQLAQTTMRSELGKITLDKTFEE 174
Query: 169 RDTLNEQIVRSINEAATDWGLKCLRYEIRDISPPRGVKVAMEMQAEAERKKRAQILESEG 228
RDTLNE+IV +IN AA DWGL+CLRYEIRDI PP GV+ AMEMQAEAERKKRAQILESEG
Sbjct: 175 RDTLNEKIVEAINVAAKDWGLQCLRYEIRDIMPPHGVRAAMEMQAEAERKKRAQILESEG 234
Query: 229 ----------------------AMLDQANRAKGEAEAILAKSEATARGIRLVSEAMRTKG 266
A +DQ NRA+GEAEAILA+++ATA+G+ L+S++++ G
Sbjct: 235 ERQSHINIADGKKSSVILASEAAKMDQVNRAQGEAEAILARAQATAKGLVLLSQSLKETG 294
Query: 267 STEAANLRVAEQYMKAFANLAKKSNTILLPSDAGNPSSLIAQSLQIYKHIC 317
EAA+LRVAEQY+ AF N+AK+ +LLPS A NP+S+IAQ+L +YK +
Sbjct: 295 GVEAASLRVAEQYITAFGNIAKEGTIMLLPSGASNPASMIAQALTMYKSLV 345
>AT5G54100.1 | chr5:21954035-21956500 REVERSE LENGTH=402
Length = 401
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/303 (66%), Positives = 244/303 (80%), Gaps = 23/303 (7%)
Query: 49 LSTPVNWGVSIVPEKKAFVVERFGKYVKTLGSGIHVLVPLVDRIAYVHSLKEEAIPIPDQ 108
++ P NWG+ IVPE+KA V+ERFGK+ TL +GIH LVP VDRIAYVHSLKEEAIPI +Q
Sbjct: 98 INPPSNWGIRIVPERKACVIERFGKFHTTLPAGIHFLVPFVDRIAYVHSLKEEAIPIGNQ 157
Query: 109 SAITKDNVSIQIDGVLYVKIVDPYLASYGVENPIFAVIQLAQTTMRSELGKITLDKTFEE 168
+AITKDNVSI IDGVLYVKIVDP LASYGVENPI+AV+QLAQTTMRSELGKITLDKTFEE
Sbjct: 158 TAITKDNVSIHIDGVLYVKIVDPKLASYGVENPIYAVMQLAQTTMRSELGKITLDKTFEE 217
Query: 169 RDTLNEQIVRSINEAATDWGLKCLRYEIRDISPPRGVKVAMEMQAEAERKKRAQILESEG 228
RDTLNE+IV +IN AA DWGL+CLRYEIRDI PP GV+VAMEMQAEAERKKRAQILESEG
Sbjct: 218 RDTLNEKIVEAINVAAKDWGLQCLRYEIRDIMPPNGVRVAMEMQAEAERKKRAQILESEG 277
Query: 229 ----------------------AMLDQANRAKGEAEAILAKSEATARGIRLVSEAMRTKG 266
AM+DQ NRA+GEAEAILA+++ATA+G+ +VS++++ G
Sbjct: 278 ERQAHINRADGKKSSVILESEAAMMDQVNRAQGEAEAILARAQATAKGLAMVSQSLKEAG 337
Query: 267 STEAANLRVAEQYMKAFANLAKKSNTILLPSDAGNPSSLIAQSLQIYKHI-CQTNSLKSG 325
EAA+LRVAEQY++AF +AK+ T+LLPS+ NP+S+IAQ+L +YK + + ++ SG
Sbjct: 338 GEEAASLRVAEQYIQAFGKIAKEGTTMLLPSNVDNPASMIAQALGMYKGLSTKVPTVVSG 397
Query: 326 KYL 328
K L
Sbjct: 398 KLL 400
>AT3G01290.1 | chr3:88252-89356 REVERSE LENGTH=286
Length = 285
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 129/267 (48%), Gaps = 19/267 (7%)
Query: 59 IVPEKKAFVVERFGKYVKTLGSGIHVLVPLV--DRIAYVHSLKEEAIPIPDQSAITKDNV 116
+V + V ERFGK+ K L G+ VP V D +A +L+ + + + ++ TKDNV
Sbjct: 9 LVKQSDVAVKERFGKFQKVLNPGLQ-FVPWVIGDYVAGTLTLRLQQLDVQCETK-TKDNV 66
Query: 117 SIQIDGVLYVKIVDPYL--ASYGVENPIFAVIQLAQTTMRSELGKITLDKTFEERDTLNE 174
+ + + +++ A Y + NP + +R+ + K+ LD FE+++ + +
Sbjct: 67 FVTVVASIQYRVLADKASDAFYRLSNPTTQIKAYVFDVIRACVPKLNLDDVFEQKNEIAK 126
Query: 175 QIVRSINEAATDWGLKCLRYEIRDISPPRGVKVAMEMQAEAERKKRAQILESEGAMLDQA 234
+ +++A T +G + L+ I DI P + VK AM A R + A ++E + Q
Sbjct: 127 SVEEELDKAMTAYGYEILQTLIIDIEPDQQVKRAMNEINAAARMRVAASEKAEAEKIIQI 186
Query: 235 NRAKGEAEA-------ILAKSEATARGIR--LVSEAMRTKGST--EAANLRVAEQYMKAF 283
RA+GEAE+ I + +A G+R ++ A G++ + ++ + QY
Sbjct: 187 KRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAGNVPGTSAKDVLDMVMMTQYFDTM 246
Query: 284 ANLA--KKSNTILLPSDAGNPSSLIAQ 308
++ KS+ + +P G S + AQ
Sbjct: 247 RDIGATSKSSAVFIPHGPGAVSDVAAQ 273
>AT5G51570.1 | chr5:20949511-20951234 FORWARD LENGTH=293
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 117/251 (46%), Gaps = 17/251 (6%)
Query: 67 VVERFGKYVKTLGSGIHVLVPLVDR-IAYVHSLKEEAIPIPDQSAITKDNVSIQIDGVLY 125
VVER+G++ G H PL + +A V S + +++ + ++ TKDNV +Q+ +
Sbjct: 19 VVERWGRFEHIAEPGCHFFNPLAGQWLAGVLSTRIKSLDVKIETK-TKDNVFVQLVCSIQ 77
Query: 126 VKIVDPYL--ASYGVENPIFAVIQLAQTTMRSELGKITLDKTFEERDTLNEQIVRSINEA 183
++V A Y ++NP + +R+ + +TLD FE++ + + ++ + +
Sbjct: 78 YRVVKASADDAFYELQNPKEQIQAYVFDVVRALVPMMTLDALFEQKGEVAKSVLEELEKV 137
Query: 184 ATDWGLKCLRYEIRDISPPRGVKVAMEMQAEAERKKRAQILESEGAMLDQANRAKGEAEA 243
+G + DI P V+ AM A+R + A + + E + Q RA+ EAEA
Sbjct: 138 MGAYGYSIEHILMVDIIPDPSVRKAMNEINAAQRLQLASVYKGEAEKILQVKRAEAEAEA 197
Query: 244 ILAKSEATARGIRLVSEAMR---------TKGST--EAANLRVAEQYMKAFANL--AKKS 290
AR + +++ +R +G++ E +L + QY +L + K+
Sbjct: 198 KYLGGVGVARQRQAITDGLRENILNFSDKVEGTSAKEVMDLIMITQYFDTIRDLGNSSKN 257
Query: 291 NTILLPSDAGN 301
T+ LP G+
Sbjct: 258 TTVFLPHGPGH 268
>AT1G69840.1 | chr1:26293932-26295150 REVERSE LENGTH=287
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%), Gaps = 26/285 (9%)
Query: 56 GVSIVPEKKAFVVERFGKYVKTLGSGIHVL-VPLVDRIAYVHSLKEEAIPIPDQSAITKD 114
G V + + E FGK+ + L G H L L ++A SL+ + + + ++ TKD
Sbjct: 6 GCIQVDQSNVAIKETFGKFDEVLEPGCHCLPWCLGSQVAGHLSLRVQQLDVRCETK-TKD 64
Query: 115 NVSIQIDGVLYVKIV-----DPYLASYGVENPIFAVIQLAQTTMRSELGKITLDKTFEER 169
NV + + + + + D + N I A + +R+ + K+ LD TFE++
Sbjct: 65 NVFVTVVASIQYRALAESAQDAFYKLSNTRNQIQAYVF---DVIRASVPKLDLDSTFEQK 121
Query: 170 DTLNEQIVRSINEAATDWGLKCLRYEIRDISPPRGVKVAMEMQAEAERKKRAQILESEGA 229
+ + + + + +A + +G + ++ I DI P VK AM A R + A ++E
Sbjct: 122 NDIAKTVETELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNEINAASRMREAASEKAEAE 181
Query: 230 MLDQANRAKGEAEA-------ILAKSEATARGIR----LVSEAMRTKGSTEAANLRVAEQ 278
+ Q RA+GEAE+ I + +A G+R SE++ S + ++ + Q
Sbjct: 182 KILQIKRAEGEAESKYLSGMGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVTQ 241
Query: 279 YMKAFANL--AKKSNTILLPSDAGNPSSLIAQSLQIYKHICQTNS 321
Y + + KSN++ +P G + + QI + Q NS
Sbjct: 242 YFDTLKEIGASSKSNSVFIPHGPGAVRDIAS---QIRDGLLQGNS 283
>AT5G62740.1 | chr5:25201320-25202535 FORWARD LENGTH=287
Length = 286
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 23/251 (9%)
Query: 69 ERFGKYVKTLGSGIHVL-VPLVDRIAYVHSLKEEAIPIPDQSAITKDNVSIQIDG----- 122
E FGK+ L G H L L ++A SL+ + + + ++ TKDNV + +
Sbjct: 19 ETFGKFEDVLEPGCHFLPWCLGSQVAGYLSLRVQQLDVRCETK-TKDNVFVNVVASIQYR 77
Query: 123 VLYVKIVDPYLASYGVENPIFAVIQLAQTTMRSELGKITLDKTFEERDTLNEQIVRSINE 182
L K D Y Y + N + +R+ + K+ LD FE+++ + + + + +
Sbjct: 78 ALANKANDAY---YKLSNTRGQIQAYVFDVIRASVPKLLLDDVFEQKNDIAKAVEEELEK 134
Query: 183 AATDWGLKCLRYEIRDISPPRGVKVAMEMQAEAERKKRAQILESEGAMLDQANRAKGEAE 242
A + +G + ++ I DI P VK AM A R + A ++E + Q RA+GEAE
Sbjct: 135 AMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEAEKILQIKRAEGEAE 194
Query: 243 A-------ILAKSEATARGIR--LVSEAMRTKGST--EAANLRVAEQYMKAFANL--AKK 289
+ I + +A G+R ++ A+ G+T + ++ + QY + + K
Sbjct: 195 SKYLSGLGIARQRQAIVDGLRDSVLGFAVNVPGTTAKDVMDMVLVTQYFDTMKEIGASSK 254
Query: 290 SNTILLPSDAG 300
S+ + +P G
Sbjct: 255 SSAVFIPHGPG 265
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.130 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,011,470
Number of extensions: 207876
Number of successful extensions: 652
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 646
Number of HSP's successfully gapped: 7
Length of query: 377
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 277
Effective length of database: 8,364,969
Effective search space: 2317096413
Effective search space used: 2317096413
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)