BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0157600 Os08g0157600|AK111893
(719 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46830.1 | chr2:19246005-19248717 FORWARD LENGTH=609 157 3e-38
AT1G01060.1 | chr1:33992-37061 REVERSE LENGTH=646 154 2e-37
AT5G37260.1 | chr5:14751344-14752972 REVERSE LENGTH=288 128 1e-29
AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337 125 9e-29
AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373 125 9e-29
AT5G17300.1 | chr5:5690435-5692435 REVERSE LENGTH=388 124 2e-28
AT5G52660.2 | chr5:21359423-21362037 REVERSE LENGTH=332 104 2e-22
AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299 103 3e-22
AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294 101 1e-21
AT4G01280.2 | chr4:535288-536854 FORWARD LENGTH=304 101 1e-21
AT1G01520.1 | chr1:190596-192139 FORWARD LENGTH=288 100 4e-21
AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338 51 2e-06
>AT2G46830.1 | chr2:19246005-19248717 FORWARD LENGTH=609
Length = 608
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 79/91 (86%)
Query: 1 MEINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQ 60
ME NSSGE+ V+K RKPYTITKQRERWTE EHNRF+EAL+LYGRAWQ+IEEHV TKTAVQ
Sbjct: 1 METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQ 60
Query: 61 IRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
IRSHAQKFF+K+EKEA G + GQA DI I
Sbjct: 61 IRSHAQKFFSKVEKEAEAKGVAMGQALDIAI 91
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 184/388 (47%), Gaps = 56/388 (14%)
Query: 348 YRSFANMSSTFSSMLVSTLLSNPAIHAAARLAASYWPT-VDGNTPDPNQENLSESAQGSH 406
Y+SF N ++STLL PA++ AA A+S+WP G +P P
Sbjct: 261 YQSFPNH-------IMSTLLQTPALYTAATFASSFWPPDSSGGSPVP------------- 300
Query: 407 AGSPPNMXXXXXXXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXS-TADVQRAQEKD 465
SPPN+ G + DV+ +
Sbjct: 301 GNSPPNLAAMAAATVAAASAWWAANGLLPLCAPLSSGGFTSHPPSTFGPSCDVEYTKAST 360
Query: 466 IDCPMDNAQKELQETRKQDNFEAMKVIVSSETDESGKGEVSLHTELKISPA--DKADTKP 523
+ Q ++R+Q++ EA K S ++++ E K P ++ P
Sbjct: 361 L-------QHGSVQSREQEHSEASKARSSLDSED---------VENKSKPVCHEQPSATP 404
Query: 524 AAGAETSDVFGNKKKQDRSSCGSNTPSSSD-IEADNAPENQEKANDKAKQAS--CSNSSA 580
+ A+ SD G++K+ DRSSCGSNTPSSSD +EAD + ++ N + K+ + +
Sbjct: 405 ESDAKGSDGAGDRKQVDRSSCGSNTPSSSDDVEADASERQEDGTNGEVKETNEDTNKPQT 464
Query: 581 GDNNHRRFRSSASTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQVEGSKEISKXXXXX 640
++N RR R S++ +D WK VS+EGR+AF ALFSRE LPQSF+ E +E +
Sbjct: 465 SESNARRSRISSNITDPWKSVSDEGRIAFQALFSREVLPQSFT--YREEHREEEQQQQEQ 522
Query: 641 XXXXXXXLNKNAAIIDQELDTADEPRAS--FPNELSNLKLKSR-RTGFKPYKRCSVEAKE 697
LN A + +D +E R + L KL SR RTGFKPYKRCS+EAKE
Sbjct: 523 RYPMALDLNFTAQLT--PVDDQEEKRNTGFLGIGLDASKLMSRGRTGFKPYKRCSMEAKE 580
Query: 698 NRVPASDEV------GTKRIRLESEAST 719
+R+ ++ + KR+RLE++AST
Sbjct: 581 SRILNNNPIIHVEQKDPKRMRLETQAST 608
>AT1G01060.1 | chr1:33992-37061 REVERSE LENGTH=646
Length = 645
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 77/91 (84%)
Query: 1 MEINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQ 60
M+ N+SGEE + K RKPYTITKQRERWTE EH RFLEAL+LYGRAWQRIEEH+GTKTAVQ
Sbjct: 1 MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60
Query: 61 IRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
IRSHAQKFFTKLEKEA G QA DI+I
Sbjct: 61 IRSHAQKFFTKLEKEAEVKGIPVCQALDIEI 91
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 115/205 (56%), Gaps = 19/205 (9%)
Query: 525 AGAETSDVFGNKKKQDRSSCGSNTPSSSDIEADNAPENQEKANDKAKQASCSNSSAGDNN 584
A S+ K DRSSCGSNTPS SD E D A + EK + K+ + + N
Sbjct: 450 AAVHDSNTAQKKNLVDRSSCGSNTPSGSDAETD-ALDKMEKDKEDVKETDENQPDVIELN 508
Query: 585 HRRFR------SSASTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQVEGSKEISKXXX 638
+R+ + ++ +T+DSWKEVSEEGR+AF ALF+RERLPQSFSPPQV ++ +++
Sbjct: 509 NRKIKMRDNNSNNNATTDSWKEVSEEGRIAFQALFARERLPQSFSPPQV--AENVNRKQS 566
Query: 639 XXXXXXXXXLNKNAAIIDQELDTADEPRASFPNELSNLKLKSRRTGFKPYKRCSVEAKEN 698
Q+ AD+ + LK+R+TGFKPYKRCS+E KE+
Sbjct: 567 DTSMPLAPNFKS------QDSCAADQEGVVMIGVGTCKSLKTRQTGFKPYKRCSMEVKES 620
Query: 699 RVP----ASDEVGTKRIRLESEAST 719
+V SDE KR+RLE EAST
Sbjct: 621 QVGNINNQSDEKVCKRLRLEGEAST 645
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 341 CHCNQDAYRSFANMSSTFSSMLVSTLLSNPAIHAAARLAASYWPTVD-GNTPD 392
CH +QD YRSF +SSTFS++++STLL NPA HAAA AAS WP GN+ D
Sbjct: 281 CH-SQDDYRSFLQISSTFSNLIMSTLLQNPAAHAAATFAASVWPYASVGNSGD 332
>AT5G37260.1 | chr5:14751344-14752972 REVERSE LENGTH=288
Length = 287
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 66/74 (89%)
Query: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
E+ SS + +K RKPYTITKQRE+WTEAEH +F+EALKLYGRAW+RIEEHVGTKTAVQI
Sbjct: 14 ELISSSDAFYLKTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAVQI 73
Query: 62 RSHAQKFFTKLEKE 75
RSHAQKFFTK+ ++
Sbjct: 74 RSHAQKFFTKVARD 87
>AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337
Length = 336
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 67/75 (89%)
Query: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
E +S E VVKVRKPYT+TKQRE+W+E EH+RFLEA+KLYGR W++I+EH+GTKTAVQI
Sbjct: 43 ETSSHWIENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQI 102
Query: 62 RSHAQKFFTKLEKEA 76
RSHAQKFF+K+ +EA
Sbjct: 103 RSHAQKFFSKMAQEA 117
>AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373
Length = 372
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 67/75 (89%)
Query: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
E +S E VVKVRKPYT+TKQRE+W+E EH+RFLEA+KLYGR W++I+EH+GTKTAVQI
Sbjct: 54 ETSSHWIENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQI 113
Query: 62 RSHAQKFFTKLEKEA 76
RSHAQKFF+K+ +EA
Sbjct: 114 RSHAQKFFSKMAQEA 128
>AT5G17300.1 | chr5:5690435-5692435 REVERSE LENGTH=388
Length = 387
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 63/70 (90%)
Query: 7 GEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQIRSHAQ 66
G + KVRKPYTITK+RERWT+ EH +F+EALKLYGRAW+RIEEHVG+KTAVQIRSHAQ
Sbjct: 38 GNDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQ 97
Query: 67 KFFTKLEKEA 76
KFF+K+ +EA
Sbjct: 98 KFFSKVAREA 107
>AT5G52660.2 | chr5:21359423-21362037 REVERSE LENGTH=332
Length = 331
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 3 INSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQIR 62
++SS E+ K+RKPYTITK RE WTE EH++FLEAL+L+ R W++IE +G+KT +QIR
Sbjct: 51 VSSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIR 110
Query: 63 SHAQKFFTKLEKEAINNGTSP 83
SHAQK+F K++K P
Sbjct: 111 SHAQKYFLKVQKSGTGEHLPP 131
>AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299
Length = 298
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 57/69 (82%), Gaps = 4/69 (5%)
Query: 13 KVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQIRSHAQKFFTKL 72
KVRKPYTITK RE WTE EH++FLEAL+L+ R W++IE+ VG+KT +QIRSHAQK+F K+
Sbjct: 32 KVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 91
Query: 73 EKEAINNGT 81
+K NGT
Sbjct: 92 QK----NGT 96
>AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Query: 7 GEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQIRSHAQ 66
GE KVRK YTITK RE WTE EH++FLEAL+L+ R W++IE+ VG+KT +QIRSHAQ
Sbjct: 31 GEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQ 90
Query: 67 KFFTKLEKEAINNGT 81
K+F K++K NGT
Sbjct: 91 KYFLKVQK----NGT 101
>AT4G01280.2 | chr4:535288-536854 FORWARD LENGTH=304
Length = 303
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 56/79 (70%)
Query: 5 SSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQIRSH 64
S E+ K+RKPYTI K RE WT+ EH++FLEAL L+ R W++IE VG+KT VQIRSH
Sbjct: 40 SFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSH 99
Query: 65 AQKFFTKLEKEAINNGTSP 83
AQK+F K++K N P
Sbjct: 100 AQKYFLKVQKSGANEHLPP 118
>AT1G01520.1 | chr1:190596-192139 FORWARD LENGTH=288
Length = 287
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 5 SSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQIRSH 64
S E+ KVRKPYTITK RE WTE EH++FLEAL L+ R W++I+ VG+KT +QIRSH
Sbjct: 42 SFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSH 101
Query: 65 AQKFFTKLEKEAINNGT 81
AQK+F K++K NGT
Sbjct: 102 AQKYFLKVQK----NGT 114
>AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 22 KQRER----WTEAEHNRFLEALKLYGRA-WQRIEEH-VGTKTAVQIRSHAQKFFTKLEKE 75
KQ+ R W EH +FL LK YG+ W+ I H V T+T+ Q+ SHAQK+F + E
Sbjct: 113 KQKRRRGVPWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSE 172
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.307 0.122 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,877,662
Number of extensions: 539827
Number of successful extensions: 1922
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1940
Number of HSP's successfully gapped: 15
Length of query: 719
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 613
Effective length of database: 8,200,473
Effective search space: 5026889949
Effective search space used: 5026889949
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 115 (48.9 bits)