BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0154600 Os08g0154600|AK070325
(916 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55310.1 | chr5:22430389-22434590 REVERSE LENGTH=918 819 0.0
AT5G55300.2 | chr5:22424701-22429045 REVERSE LENGTH=934 812 0.0
AT4G26701.1 | chr4:13467746-13468055 FORWARD LENGTH=70 106 7e-23
>AT5G55310.1 | chr5:22430389-22434590 REVERSE LENGTH=918
Length = 917
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/547 (69%), Positives = 444/547 (81%)
Query: 370 GGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYASKQTF 429
G +KW TL H+GVIFPPPYK HGVK+L+ G+PVDLTPEQEEVATMFAVM++T+Y K F
Sbjct: 365 GQKKWKTLQHNGVIFPPPYKRHGVKILFQGKPVDLTPEQEEVATMFAVMRETEYYKKPKF 424
Query: 430 IDNFFTDWRKILGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTSXXXXXXXXXXXXXXX 489
+NF+ DWRK+LGKNH+IK + CDFTPIYEW+++EKE KKQMT+
Sbjct: 425 RENFWNDWRKLLGKNHMIKSLDDCDFTPIYEWYMQEKETKKQMTAEEKRIVKEEKLKQEE 484
Query: 490 XYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIGKGAPIPECP 549
YMWA++DGV+E++GNFRVEPPGLFRGRGEHPKMGKLK+RI+P DITINIGK APIPECP
Sbjct: 485 KYMWAVLDGVRERIGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKEAPIPECP 544
Query: 550 IPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKHHV 609
IPGE WKEVKHDNTVTWLAFW+DPI+ K+FKYVFLAASS+LKGQSDKEKYEK+RKL +H+
Sbjct: 545 IPGERWKEVKHDNTVTWLAFWSDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLHNHI 604
Query: 610 HKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDEDEAETVGCCTLKVDNVTCV 669
IR YTKDF +KD TK+QIAVATYLIDKLALRAGNEKD+DEA+TVGCCTLKV NV C+
Sbjct: 605 GSIRAAYTKDFNNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECI 664
Query: 670 PPNKLQFDFLGKDSIRYFNTVEVELLVYKAIEEFRAGKKPGQDLFDKLDTTRLNAHLKDL 729
PPNKL+FDFLGKDSI+Y NTVEVE LVYKAI +F+AGK DLFD+LDT++LN HLK+L
Sbjct: 665 PPNKLKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNTHLKEL 724
Query: 730 MPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICNHQRSVSKSHD 789
M GLTAKVFRTYNASITLD +L KET DG + EK+ VYQ+ANKEVAIICNHQR+VSKSH
Sbjct: 725 MAGLTAKVFRTYNASITLDLMLSKETRDGDVPEKVVVYQQANKEVAIICNHQRTVSKSHG 784
Query: 790 SQMTRLNEKIDELKAQRDELKADLSKVRXXXXXXXXXXXXXXRNLAPEAFEKKISQIETX 849
+Q+ +L KI+EL+ Q EL DL + + RNL PEA EKKI Q +
Sbjct: 785 AQVEKLAVKIEELREQIKELNIDLDRAKKGRTPLMGSDGKRKRNLTPEALEKKIMQTQGK 844
Query: 850 XXXXXXXXXXXXXLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKFSWAMD 909
+KTVALGTSKINY+DPRITVAWCKRH+VPIEKIFNKSL+AKF+WAMD
Sbjct: 845 IEKMERDMQTKEDMKTVALGTSKINYMDPRITVAWCKRHDVPIEKIFNKSLLAKFAWAMD 904
Query: 910 VDPDFRF 916
VDP+FRF
Sbjct: 905 VDPEFRF 911
>AT5G55300.2 | chr5:22424701-22429045 REVERSE LENGTH=934
Length = 933
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/818 (53%), Positives = 539/818 (65%), Gaps = 80/818 (9%)
Query: 148 DSDDDKPLSLKINSTKTPSSSANKAIVLKTTPKIEQPGDDSEDDKPL--ASRLPTNAALK 205
DS+DD+PLS ++ K P+SS + +P QP + D+PL ASR+
Sbjct: 121 DSEDDRPLSSILSGNKGPTSSRQVS-----SP---QPEKKNNGDRPLDRASRI------- 165
Query: 206 RGGNVSDDSEDEKPLAARF-SKVTGNASASISSSKDKVLXXXXXXXXXXXXXXXXXXXXR 264
+ D+S+DE P+++ F K+ S S D+ +
Sbjct: 166 ----IKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNEVPNGK 221
Query: 265 NSIKRPIDNNNQT-SSALKKARPSDVSASASVKREPKADDNDN----------------- 306
KRP++ N+ S+LKKA+ S S +K++ + D+
Sbjct: 222 VLGKRPLEKNSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKMKAKQLST 281
Query: 307 ------------VPLSQRLKM------------------GESSKSKPPAKNIVKKSPSSL 336
VP+S+R K SS +KP A+N+V SP S
Sbjct: 282 REDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNVV--SPRS- 338
Query: 337 XXXXXXXXXXXXXXXXXXXSQFSKTMKVPPGSGGGQK-WTTLVHSGVIFPPPYKPHGVKM 395
S++S + K P SG GQK WTTLVH+GVIFPPPYKPHG+K+
Sbjct: 339 ------RAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGIKI 392
Query: 396 LYNGQPVDLTPEQEEVATMFAVMKDTDYASKQTFIDNFFTDWRKILGKNHVIKKFELCDF 455
LY G+PVDLT EQEEVATMFAVM++TDY +K F +NF+ DWR++LGK HVI+K + CDF
Sbjct: 393 LYKGKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDCDF 452
Query: 456 TPIYEWHLREKEKKKQMTSXXXXXXXXXXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFR 515
TPIYEWHL EKEKKKQM++ YMWA+VDGVKEK+GNFRVEPPGLFR
Sbjct: 453 TPIYEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFR 512
Query: 516 GRGEHPKMGKLKRRIKPSDITINIGKGAPIPECPIPGESWKEVKHDNTVTWLAFWNDPIS 575
GRGEHPKMGKLK+RI P +IT+NIGKGAPIPECPI GE WKEVKHDNTVTWLAFW DPI+
Sbjct: 513 GRGEHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADPIN 572
Query: 576 QKDFKYVFLAASSALKGQSDKEKYEKSRKLKHHVHKIRDTYTKDFRSKDKTKKQIAVATY 635
K+FKYVFL A S+LKG SDKEKYEK+R L H+ IR TYTK+F +KD +QIAVATY
Sbjct: 573 PKEFKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATY 632
Query: 636 LIDKLALRAGNEKDEDEAETVGCCTLKVDNVTCVPPNKLQFDFLGKDSIRYFNTVEVELL 695
LIDKLALRAGNEKD+DEA+TVGCCTLKV NV C+PPNK++FDFLGKDSI+Y NTVEVE L
Sbjct: 633 LIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPL 692
Query: 696 VYKAIEEFRAGKKPGQDLFDKLDTTRLNAHLKDLMPGLTAKVFRTYNASITLDDILHKET 755
VYKAI +F+AGK DLFD+LDT++LNAHLK+L+PGLTAKVFRTYNASITLD++L +ET
Sbjct: 693 VYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQET 752
Query: 756 EDGTLLEKIAVYQRANKEVAIICNHQRSVSKSHDSQMTRLNEKIDELKAQRDELKADLSK 815
+DG + +KI VYQ+ANKEVAIICNHQR+VSK+H +Q+ +L +I+ELK ELK +L +
Sbjct: 753 KDGDVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDR 812
Query: 816 VRXXXXXXXXXXXXXXRNLAPEAFEKKISQIETXXXXXXXXXXXXXXLKTVALGTSKINY 875
+ R+L P A+EKKI+Q LKTVALGTSKINY
Sbjct: 813 AKKGKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINY 872
Query: 876 LDPRITVAWCKRHEVPIEKIFNKSLIAKFSWAMDVDPD 913
LDPRITVAWCKRHEVPIEKIF KSL+ KF+WAMDV+P+
Sbjct: 873 LDPRITVAWCKRHEVPIEKIFTKSLLEKFAWAMDVEPE 910
>AT4G26701.1 | chr4:13467746-13468055 FORWARD LENGTH=70
Length = 69
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 50/54 (92%)
Query: 863 LKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKFSWAMDVDPDFRF 916
LKTVALGTSKINY+DPRITVAWCKRHE PIEKIFNKSL+ KF+WAMDV+P F F
Sbjct: 16 LKTVALGTSKINYMDPRITVAWCKRHEAPIEKIFNKSLLEKFAWAMDVEPHFTF 69
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.130 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,496,394
Number of extensions: 774261
Number of successful extensions: 2063
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2052
Number of HSP's successfully gapped: 3
Length of query: 916
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 808
Effective length of database: 8,145,641
Effective search space: 6581677928
Effective search space used: 6581677928
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)