BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0151700 Os08g0151700|AK073149
         (586 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01270.1  | chr4:532351-534891 FORWARD LENGTH=507              198   6e-51
AT4G11360.1  | chr4:6906066-6906539 FORWARD LENGTH=158             58   2e-08
AT4G11370.1  | chr4:6907777-6908256 FORWARD LENGTH=160             52   7e-07

>AT4G01270.1 | chr4:532351-534891 FORWARD LENGTH=507
          Length = 506

 Score =  198 bits (504), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 110/293 (37%), Positives = 165/293 (56%), Gaps = 8/293 (2%)

Query: 4   AAAWPVCTICYEDLRPLSDQHLHCLPACGHVFHALCLEQWLEYCPGGKKKLTCPICKQPC 63
           AA   +C+ICYEDL+P+  ++L  + ACGHVFH LCL+QW EYCP   K+  CPICKQ C
Sbjct: 6   AAGNAICSICYEDLKPVV-ENLQSISACGHVFHELCLQQWFEYCPSTNKR-NCPICKQKC 63

Query: 64  GAAHPPTRLFFQSTGACPTQTASSSPSRHEPTDGGADRDELAAEVARLEQKAASLGRVLD 123
            +   P RL+FQS+G      AS      E      D   L  EV RLE K  +L   L+
Sbjct: 64  -SLKDPCRLYFQSSGNQTDSIASDKVVGIEE-----DPVLLRGEVKRLEGKVQNLTSALE 117

Query: 124 EQRDGIQKLNAEVAMWREKAAEAEVMKESVRREKECVQHLLNAKTEELSRKSSECGRLQX 183
            ++    +++ ++    E+  E +V +    +E    QHLL  K+EE  + +S+C +LQ 
Sbjct: 118 AKKKENVEVSDKLHQCNEQLKEDKVKRWEALQEISTTQHLLKLKSEECIQLNSQCVKLQE 177

Query: 184 XXXXXXXXXXXXXXXTDMNLQEEEILKLASLGNHGNAANAVDVLTRSLALRNKSYKELMI 243
                          +D++L+E+++LKLA LGN+    + +D L +SL +RN+SYKEL+ 
Sbjct: 178 RTVALAKELASLKLVSDLSLEEDDVLKLALLGNNAKTKDTIDTLVKSLVIRNRSYKELLA 237

Query: 244 QCNVLGRSESRSQQRFXXXXXXXXXXXXRVQDLEKEQEEKENGVIRDLRSAKK 296
           +CN LGR E+RS ++             R+++LE   EE+EN  +RD+  +KK
Sbjct: 238 KCNQLGRGEARSSEKLEKALEKIEKLKKRMRELELITEERENRALRDINVSKK 290




 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 14/91 (15%)

Query: 507 GTGKSVGKWCK----GVATPGSLNTNANKRNLIAVGPDGRGGKVKILRDLGKFQDSKTQA 562
           GT +++G+W K      ATP    +   K +LI++GPDG+GG++K+LR   K Q SKT A
Sbjct: 415 GTNRNLGRWSKHGERNEATPSLGGSVPRKDDLISIGPDGKGGRIKVLR--SKPQISKTNA 472

Query: 563 LWPKAQ--KVGSRGGQS------QIDHFFGK 585
                +  K+G++   S      QI+H+FGK
Sbjct: 473 SSGSGKRFKLGTKTSGSSSQGCLQIEHYFGK 503



>AT4G11360.1 | chr4:6906066-6906539 FORWARD LENGTH=158
          Length = 157

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 6/51 (11%)

Query: 10  CTICYEDLRPLSDQHLHCLPACGHVFHALCLEQWLEYCPGGKKKLTCPICK 60
           CT+C  D   +SD  +  LP CGHVFH  CL++W+  C     K+TCPIC+
Sbjct: 85  CTVCLSDF--VSDDKIRQLPKCGHVFHHRCLDRWIVDC----NKITCPICR 129



>AT4G11370.1 | chr4:6907777-6908256 FORWARD LENGTH=160
          Length = 159

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 8/53 (15%)

Query: 10  CTICYEDLRPLSDQHLHCLPACGHVFHALCLEQWL-EYCPGGKKKLTCPICKQ 61
           CT+C  D    SD  +  LP CGHVFH  CL++W+ +Y      K+ CP+C+ 
Sbjct: 86  CTVCLSDFE--SDDKVRQLPKCGHVFHHYCLDRWIVDY-----NKMKCPVCRH 131



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.313    0.130    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,820,786
Number of extensions: 562167
Number of successful extensions: 1745
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1842
Number of HSP's successfully gapped: 5
Length of query: 586
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 482
Effective length of database: 8,255,305
Effective search space: 3979057010
Effective search space used: 3979057010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 114 (48.5 bits)