BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0150800 Os08g0150800|AK101530
(394 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33840.1 | chr2:14315011-14317329 FORWARD LENGTH=386 560 e-160
AT1G28350.1 | chr1:9944483-9949577 FORWARD LENGTH=749 517 e-147
>AT2G33840.1 | chr2:14315011-14317329 FORWARD LENGTH=386
Length = 385
Score = 560 bits (1442), Expect = e-160, Method: Compositional matrix adjust.
Identities = 251/345 (72%), Positives = 299/345 (86%)
Query: 38 LQDRFELLRGIGEECIQEDELMNLLQKKPVPICYDGFEPSGRMHIAQGIVKTINVNKMVR 97
++ R++++R IGEECIQE+EL NLL KK PICYDGFEPSGRMHIAQG++K INVNKM
Sbjct: 39 VEKRYKIVRSIGEECIQEEELKNLLAKKAAPICYDGFEPSGRMHIAQGVMKVINVNKMTS 98
Query: 98 AGCKVKIWIADWFAQLNNKMGGDIKKIQTVGRYMIEIWRAAGMNLDGVEFLWSSEEINKR 157
AGC+VKIWIADWFAQLNNKMGGD+KKI+ VG Y EIW+AAGM+ D VEFLWSSEEIN +
Sbjct: 99 AGCRVKIWIADWFAQLNNKMGGDLKKIRVVGEYFQEIWKAAGMDNDKVEFLWSSEEINSK 158
Query: 158 ANEYWPLVMDIARKNNVKRIMRCCQIMGRNDSDELTAAQIFYPCMQCADIFFLKADICQL 217
A++YWPLVMDIARKN + RI+RC QIMGR+++DEL+AAQI YPCMQCADIFFL+ADICQL
Sbjct: 159 ADKYWPLVMDIARKNKLPRILRCVQIMGRSETDELSAAQILYPCMQCADIFFLEADICQL 218
Query: 218 GMDQRKVNMLAREYCDDIKRRNKPIILSHHMLPGFKEGQEKMSKSDPSSAIFMEDDEAQV 277
GMDQRKVN+LAREYCDDIKR+NKPIILSHHMLPG ++GQEKMSKSDP SAIFMED+EA+V
Sbjct: 219 GMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPLSAIFMEDEEAEV 278
Query: 278 NLKIKQAFCPPNIVDGNPCLEYIKYIVFPWFETFEVVRKEENGGNKTFANMNELIADYES 337
N+KIK+A+CPP +V GNPCLEYIKYI+ PWF+ F V R EE GGNKT+ + ++ ADYES
Sbjct: 279 NVKIKKAYCPPKVVKGNPCLEYIKYIILPWFDEFTVERNEEYGGNKTYKSFEDIAADYES 338
Query: 338 GALHPADVKPALAKAINQILQPIRDHFKNNSEAKVLLNTVKNYKV 382
G LHP D+K L A+N+ILQP+RDHFK ++ AK LL +K Y+V
Sbjct: 339 GELHPGDLKKGLMNALNKILQPVRDHFKTDARAKNLLKQIKAYRV 383
>AT1G28350.1 | chr1:9944483-9949577 FORWARD LENGTH=749
Length = 748
Score = 517 bits (1331), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/361 (68%), Positives = 298/361 (82%), Gaps = 7/361 (1%)
Query: 28 NLAAGMAAMSLQD------RFELLRGIGEECIQEDELMNLLQKKPVPICYDGFEPSGRMH 81
N +A +A LQ +++++R IGEECIQEDEL NLL KKP PICYDGFEPSGRMH
Sbjct: 387 NTSASSSAAGLQMSEEAEMKYKIVRSIGEECIQEDELKNLLAKKPAPICYDGFEPSGRMH 446
Query: 82 IAQGIVKTINVNKMVRAGCKVKIWIADWFAQLNNKMGGDIKKIQTVGRYMIEIWRAAGMN 141
IAQG++K NVNK+ AGC+VKIWIADWFAQLNNK+GGD+++I+ VG Y EIW+A GMN
Sbjct: 447 IAQGVMKVTNVNKLTSAGCQVKIWIADWFAQLNNKLGGDLERIRVVGEYFKEIWQAGGMN 506
Query: 142 LDGVEFLWSSEEINKRANEYWPLVMDIARKNNVKRIMRCCQIMGRNDSDELTAAQIFYPC 201
D VEFLW+S+EIN + ++YWPLVMDIAR+NN++RI+RC QIMGR++++ L+AAQI YPC
Sbjct: 507 NDKVEFLWASDEINGKGSKYWPLVMDIARRNNLRRILRCGQIMGRSETEVLSAAQILYPC 566
Query: 202 MQCADIFFLKADICQLGMDQRKVNMLAREYCDDIKRRNKPIILSHHMLPGFKEGQEKMSK 261
MQCADIF L+ADICQLGMDQRKVNMLAREYC DIKR+NKPIILSHHMLPG ++GQEKMSK
Sbjct: 567 MQCADIFLLEADICQLGMDQRKVNMLAREYCADIKRKNKPIILSHHMLPGLQQGQEKMSK 626
Query: 262 SDPSSAIFMEDDEAQVNLKIKQAFCPPNIVDGNPCLEYIKYIVFPWFETFEVVRKEENGG 321
SDPSSAIFMED+EA VN KI +A+CPP V+GNPCLEY+KYIV P F F+ V E+NGG
Sbjct: 627 SDPSSAIFMEDEEADVNEKISKAYCPPKTVEGNPCLEYVKYIVLPRFNEFK-VESEKNGG 685
Query: 322 NKTFANMNELIADYESGALHPADVKPALAKAINQILQPIRDHFKNNSEAKVLLNTVKNYK 381
NKTF + +++ADYE+G LHP D+K AL KA+N LQP+RDHFK N AK LL VK ++
Sbjct: 686 NKTFNSFEDIVADYETGELHPEDLKKALMKALNITLQPVRDHFKTNERAKNLLEQVKAFR 745
Query: 382 V 382
V
Sbjct: 746 V 746
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 233/367 (63%), Positives = 297/367 (80%), Gaps = 10/367 (2%)
Query: 38 LQDRFELLRGIGEECIQEDELMNLLQKKPVPICYDGFEPSGRMHIAQGIVKTINVNKMVR 97
++ R+ ++R +GE+CI +DEL +LL KK P+CYDGFEPSGRMHIAQG++K +NVNK+
Sbjct: 25 VEKRYNVVRSVGEQCIHDDELKDLLAKKAAPVCYDGFEPSGRMHIAQGLMKIMNVNKLTS 84
Query: 98 AGCKVKIWIADWFAQLNNKMGGDIKKIQTVGRYMIEIWRAAGMNLDGVEFLWSSEEINKR 157
AGC+VKIWIADWFA +NNK+GGD+KKI+ VG Y EI++AAGMN + VEFLWSS+EIN +
Sbjct: 85 AGCRVKIWIADWFAYMNNKLGGDLKKIRVVGEYFKEIFQAAGMNSENVEFLWSSDEINAK 144
Query: 158 ANEYWPLVMDIARKNNVKRIMRCCQIMGRNDSDELTAAQIFYPCMQCADIFFLKADICQL 217
+EYWPLVMDIA +N++ +I RC IMG ++++EL+AA I Y CMQCAD FFL+ADICQL
Sbjct: 145 GDEYWPLVMDIACRNSLAQIKRCMPIMGLSENEELSAAHILYVCMQCADTFFLEADICQL 204
Query: 218 GMDQRKVNMLAREYCDDIKRRNKPIILSHHMLPGFKEGQEKMSKSDPSSAIFMEDDEAQV 277
GMDQ+ VN+LAR+YCD +KR NKP+ILSHHMLPG ++GQ+KMSKSDPSSAIFMED+EA+V
Sbjct: 205 GMDQQTVNLLARDYCDVVKRENKPVILSHHMLPGLQQGQKKMSKSDPSSAIFMEDEEAEV 264
Query: 278 NLKIKQAFCPPNIVDGNPCLEYIKYIVFPWFETFEVVRKEENGGNKTFANMNELIADYES 337
N+KIK+A+CPP+IV+GNPCLEY+K+I+ PWF F V R E+ GGN+TF + ++ DYES
Sbjct: 265 NVKIKKAYCPPDIVEGNPCLEYVKHIILPWFSEFTVERDEKYGGNRTFKSFEDITTDYES 324
Query: 338 GALHPADVKPALAKAINQILQPIRDHFKNNSEAKVLLNTVKNYKV----------KTEDT 387
G LHP D+K AL+KA+N+ILQP+RDHFK NS AK LL VK YKV K ED
Sbjct: 325 GQLHPKDLKDALSKALNKILQPVRDHFKTNSRAKNLLKQVKGYKVTRVIPTASSTKEEDL 384
Query: 388 SSSPQAS 394
S + AS
Sbjct: 385 SINTSAS 391
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,323,099
Number of extensions: 349641
Number of successful extensions: 790
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 789
Number of HSP's successfully gapped: 3
Length of query: 394
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 293
Effective length of database: 8,337,553
Effective search space: 2442903029
Effective search space used: 2442903029
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)