BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0140500 Os08g0140500|Os08g0140500
         (523 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20340.1  | chr2:8779804-8782490 FORWARD LENGTH=491            426   e-119
AT4G28680.2  | chr4:14155248-14158546 FORWARD LENGTH=548          366   e-101

>AT2G20340.1 | chr2:8779804-8782490 FORWARD LENGTH=491
          Length = 490

 Score =  426 bits (1095), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/495 (42%), Positives = 292/495 (58%), Gaps = 15/495 (3%)

Query: 22  FRPLDADDVRSYLHKAVDFVYDYYKSVESLPVLPGVEPGYLLRLLQXXXXXXXXXFDIAM 81
            +P+D++ +R Y H  VDF+ DYYK++E  PVL  V+PGYL +LL           D  +
Sbjct: 9   LKPMDSEQLREYGHLMVDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPETLDQVL 68

Query: 82  KELREAVVPGMTHWASPNFFAFFPATNXXXXXXXXXXXXXMNTVGFTWQAAPAATEXXXX 141
            ++R  ++PG+THW SP+FFA++P+ +             +  VGF+W  +PAATE    
Sbjct: 69  DDVRAKILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSPAATELEMI 128

Query: 142 XXXXXXXXXXXXXSFMNXXXXXXXXXXXXXXXXXXSEAMLVTLVAARDAALRRSGSNGVA 201
                         FM+                  SEA+LV L+AARD  LR  G N   
Sbjct: 129 VLDWVAKLLNLPEQFMSKGNGGGVIQGSA------SEAVLVVLIAARDKVLRSVGKNA-- 180

Query: 202 GITRLTVYAADQTHSTFFKACRLAGFDPANIRSIPTGAETDYGLDPARLLEAMQADADAG 261
            + +L VY++DQTHS   KAC++AG  P N R + T + T+Y L P  L EA+  D +AG
Sbjct: 181 -LEKLVVYSSDQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAG 239

Query: 262 LVPTYVCATVGTTSSNXXXXXXXXXXXXXXXXXXXHVDAAYAGSACICPEFRHHLDGVER 321
           L+P ++CA VGTTSS                    HVDAAYAGSACICPE+R ++DGVE 
Sbjct: 240 LIPFFLCANVGTTSSTAVDPLAALGKIANSNGIWFHVDAAYAGSACICPEYRQYIDGVET 299

Query: 322 VDSISMSPHKWLMTCLDCTCLYVRDTHRLTGSLETNPEYLKNHASDSGEVTDLKDMQVGV 381
            DS +M+ HKW +T  DC+ L+V+D   LT +L TNPE+LKN AS +  V D KD Q+ +
Sbjct: 300 ADSFNMNAHKWFLTNFDCSLLWVKDQDSLTLALSTNPEFLKNKASQANLVVDYKDWQIPL 359

Query: 382 GRRFRGLKLWMVMRTYGAGKLQEHIRSDVAMAKTFEDLVRGDDRFEVVVPRNFALVCFRI 441
           GRRFR LKLWMV+R YG+  L+ +IR+ + +AK FE LV  D  FE+V PR FALVCFR+
Sbjct: 360 GRRFRSLKLWMVLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRL 419

Query: 442 RPRKSGXXXXXXXXXXXXXNRELMERLNKTGKAYVAHTVVGGRFVLRFAVGSSLQEERHV 501
            P K               NREL++ +N +GK +++HT + G+ VLR A+G+ L EE+HV
Sbjct: 420 VPVKD------EEKKCNNRNRELLDAVNSSGKLFMSHTALSGKIVLRCAIGAPLTEEKHV 473

Query: 502 RSAWELIKKTTTEIV 516
           + AW++I++  + ++
Sbjct: 474 KEAWKIIQEEASYLL 488



>AT4G28680.2 | chr4:14155248-14158546 FORWARD LENGTH=548
          Length = 547

 Score =  366 bits (939), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/503 (38%), Positives = 276/503 (54%), Gaps = 21/503 (4%)

Query: 19  VEPFRPLDADDVRSYLHKAVDFVYDYYKSVES----LPVLPGVEPGYLLRLLQXXXXXXX 74
           V   +P+D++ +R   H  VDF+ DYYK+++      PVL  V+PGYL  +L        
Sbjct: 54  VVKMKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERP 113

Query: 75  XXFDIAMKELREAVVPGMTHWASPNFFAFFPATNXXXXXXXXXXXXXMNTVGFTWQAAPA 134
                 + ++ + ++PG+THW SP++FA++ ++              ++ VGFTW  +PA
Sbjct: 114 ESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPA 173

Query: 135 ATEXXXXXXXXXXXXXXXXXSFMNXXXXXXXXXXXXXXXXXXSEAMLVTLVAARDAALRR 194
           ATE                  F++                   EA+LV ++AARD  L++
Sbjct: 174 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTG------CEAVLVVVLAARDRILKK 227

Query: 195 SGSNGVAGITRLTVYAADQTHSTFFKACRLAGFDPANIRSIPTGAETDYGLDPARLLEAM 254
            G      + +L VY +DQTHS+F KAC + G    NIR + T + T+YG+ P  L EA+
Sbjct: 228 VGK---TLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAI 284

Query: 255 QADADAGLVPTYVCATVGTTSSNXXXXXXXXXXXXXXXXXXXHVDAAYAGSACICPEFRH 314
             D   G +P ++CATVGTTSS                    HVDAAYAG+ACICPE+R 
Sbjct: 285 SHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRK 344

Query: 315 HLDGVERVDSISMSPHKWLMTCLDCTCLYVRDTHRLTGSLETNPEYL--KNHASDSGEVT 372
            +DG+E  DS +M+ HKWL     C+ L+V+D + L  +L+TNPEYL  K   S    V 
Sbjct: 345 FIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVKVSKKDTVV 404

Query: 373 DLKDMQVGVGRRFRGLKLWMVMRTYGAGKLQEHIRSDVAMAKTFEDLVRGDDRFEVVVPR 432
           + KD Q+ + RRFR LKLWMV+R YG+  L+  IR  V +AK FED V  D  FEVV  R
Sbjct: 405 NYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR 464

Query: 433 NFALVCFRIRPRKSGXXXXXXXXXXXXXNRELMERLNKTGKAYVAHTVVGGRFVLRFAVG 492
            F+LVCFR+ P                 NREL+  +N TGK +++HT + G+FVLRFAVG
Sbjct: 465 YFSLVCFRLAPVDGD------EDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVG 518

Query: 493 SSLQEERHVRSAWELIKKTTTEI 515
           + L EE+HV  AW++I+K  ++ 
Sbjct: 519 APLTEEKHVTEAWQIIQKHASKF 541



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,787,945
Number of extensions: 310091
Number of successful extensions: 582
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 574
Number of HSP's successfully gapped: 3
Length of query: 523
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 420
Effective length of database: 8,282,721
Effective search space: 3478742820
Effective search space used: 3478742820
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)