BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0128300 Os08g0128300|AK103383
(180 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13180.1 | chr1:4495394-4498204 FORWARD LENGTH=428 262 7e-71
AT5G09810.1 | chr5:3052809-3054220 FORWARD LENGTH=378 123 5e-29
AT3G53750.1 | chr3:19915924-19917371 FORWARD LENGTH=378 122 9e-29
AT2G37620.1 | chr2:15779761-15781241 FORWARD LENGTH=378 122 9e-29
AT3G46520.1 | chr3:17128567-17129981 FORWARD LENGTH=378 122 1e-28
AT5G59370.1 | chr5:23950109-23951586 FORWARD LENGTH=378 122 1e-28
AT1G49240.1 | chr1:18216539-18217947 FORWARD LENGTH=378 122 1e-28
AT3G12110.1 | chr3:3858116-3859609 FORWARD LENGTH=378 121 2e-28
AT3G18780.2 | chr3:6475535-6476832 FORWARD LENGTH=378 121 2e-28
AT2G42100.1 | chr2:17560211-17561945 FORWARD LENGTH=379 117 4e-27
AT2G42090.1 | chr2:17556744-17558369 FORWARD LENGTH=367 100 6e-22
AT2G42170.1 | chr2:17578683-17580222 FORWARD LENGTH=330 96 7e-21
AT3G27000.1 | chr3:9952787-9955784 REVERSE LENGTH=390 91 3e-19
AT1G18450.1 | chr1:6348199-6351766 FORWARD LENGTH=442 84 5e-17
AT1G73910.1 | chr1:27789293-27790187 FORWARD LENGTH=146 58 2e-09
AT3G60830.1 | chr3:22474298-22476000 FORWARD LENGTH=364 56 8e-09
AT3G33520.1 | chr3:14093791-14095476 REVERSE LENGTH=422 55 2e-08
>AT1G13180.1 | chr1:4495394-4498204 FORWARD LENGTH=428
Length = 427
Score = 262 bits (670), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 117/169 (69%), Positives = 142/169 (84%)
Query: 1 MDAATRPAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNA 60
MD +RPA+VIDNGTGY+K+GF+GN EPCF +PTVVAVNESFL+QS+ S A W Q+NA
Sbjct: 1 MDPTSRPAIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNA 60
Query: 61 GVMADLDFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEH 120
GV ADLDF+IGDEAL+ +SS + +PI HGQV+DWD MER+WQQCIFNYLRC+PE+H
Sbjct: 61 GVAADLDFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDH 120
Query: 121 YFLLTDSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSAGYAFLK 169
YFLLT+SP++ PESRE GEI+FETFNVPGLYI+V SVL+L+AGY K
Sbjct: 121 YFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSK 169
>AT5G09810.1 | chr5:3052809-3054220 FORWARD LENGTH=378
Length = 377
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 24/158 (15%)
Query: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL-- 66
+V DNGTG K GF+G+ P P++V + GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQ 51
Query: 67 -DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
D ++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PEEH LLT
Sbjct: 52 KDAYVGDEAQS---KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 126 DSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
++P++ +RE +IMFETFNVP +Y+++Q+VLSL A
Sbjct: 109 EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYA 146
>AT3G53750.1 | chr3:19915924-19917371 FORWARD LENGTH=378
Length = 377
Score = 122 bits (307), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 24/158 (15%)
Query: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL-- 66
+V DNGTG K GF+G+ P P++V + GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQ 51
Query: 67 -DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
D ++GDEA S G+ T K+PI HG V++WD ME+ W +N LR PEEH LLT
Sbjct: 52 KDAYVGDEAQS---KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
Query: 126 DSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
++P++ +RE +IMFETFN P +Y+++Q+VLSL A
Sbjct: 109 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYA 146
>AT2G37620.1 | chr2:15779761-15781241 FORWARD LENGTH=378
Length = 377
Score = 122 bits (307), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 24/158 (15%)
Query: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL-- 66
+V DNGTG K GF+G+ P P++V + GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQ 51
Query: 67 -DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
D ++GDEA S G+ T K+PI HG V++WD ME+ W +N LR PEEH LLT
Sbjct: 52 KDAYVGDEAQS---KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
Query: 126 DSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
++P++ +RE +IMFETFN P +Y+++Q+VLSL A
Sbjct: 109 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYA 146
>AT3G46520.1 | chr3:17128567-17129981 FORWARD LENGTH=378
Length = 377
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 24/158 (15%)
Query: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL-- 66
+V DNGTG K GF+G+ P P++V + GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQ 51
Query: 67 -DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
D ++GDEA S G+ T K+PI HG V++WD ME+ W +N LR PEEH LLT
Sbjct: 52 KDAYVGDEAQS---KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 126 DSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
++P++ +RE +IMFETFN P +Y+++Q+VLSL A
Sbjct: 109 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 146
>AT5G59370.1 | chr5:23950109-23951586 FORWARD LENGTH=378
Length = 377
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 24/158 (15%)
Query: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL-- 66
+V DNGTG K GF+G+ P P++V + GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQ 51
Query: 67 -DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
D ++GDEA S G+ T K+PI HG V++WD ME+ W +N LR PEEH LLT
Sbjct: 52 KDAYVGDEAQS---KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 126 DSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
++P++ +RE +IMFETFN P +Y+++Q+VLSL A
Sbjct: 109 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 146
>AT1G49240.1 | chr1:18216539-18217947 FORWARD LENGTH=378
Length = 377
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 90/165 (54%), Gaps = 24/165 (14%)
Query: 2 DAATRPAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAG 61
DA +V DNGTG K GF+G+ P P+VV + G
Sbjct: 3 DADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVG------------------RPRHHG 44
Query: 62 VMADL---DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPE 118
VM + D ++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PE
Sbjct: 45 VMVGMNQKDAYVGDEAQS---KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPE 101
Query: 119 EHYFLLTDSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
EH LLT++P++ +RE +IMFETFN P +Y+++Q+VLSL A
Sbjct: 102 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 146
>AT3G12110.1 | chr3:3858116-3859609 FORWARD LENGTH=378
Length = 377
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 24/158 (15%)
Query: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL-- 66
+V DNGTG K GF+G+ P P++V + GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQ 51
Query: 67 -DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
D ++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PEEH LLT
Sbjct: 52 KDAYVGDEAQS---KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 126 DSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
++P++ +RE +IMFETFN P +Y+++Q+VLSL A
Sbjct: 109 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 146
>AT3G18780.2 | chr3:6475535-6476832 FORWARD LENGTH=378
Length = 377
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 88/158 (55%), Gaps = 24/158 (15%)
Query: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL-- 66
+V DNGTG K GF+G+ P P+VV + GVM +
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVG------------------RPRHHGVMVGMNQ 51
Query: 67 -DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
D ++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PEEH LLT
Sbjct: 52 KDAYVGDEAQS---KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 126 DSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
++P++ +RE +IMFETFN P +Y+++Q+VLSL A
Sbjct: 109 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 146
>AT2G42100.1 | chr2:17560211-17561945 FORWARD LENGTH=379
Length = 378
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 24/157 (15%)
Query: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLD 67
A+V DNGTG K GF+G+ P P+VV + GVM +D
Sbjct: 10 AIVCDNGTGMVKAGFAGDDAPRAVFPSVVG------------------RPRHRGVMVGMD 51
Query: 68 ---FFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLL 124
F+GDEA + G+ + K+PI HG V +WD ME+ W +N LR PEEH LL
Sbjct: 52 EKDTFVGDEAQA---RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILL 108
Query: 125 TDSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSL 161
T++P++ +RE +IMFE+F P +YI +Q+VLSL
Sbjct: 109 TEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSL 145
>AT2G42090.1 | chr2:17556744-17558369 FORWARD LENGTH=367
Length = 366
Score = 99.8 bits (247), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 23/153 (15%)
Query: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLDF 68
+V D G G + GF+G+ P P VV L+ +E
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRDGLNPNES-------------------- 43
Query: 69 FIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDSP 128
++G+E + + + T K P+ HG V++WD ME+ W +N LR +PEEH LLT++P
Sbjct: 44 YVGEEGHA---NRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAP 100
Query: 129 VSTPESRECAGEIMFETFNVPGLYISVQSVLSL 161
+ +RE +IMFE+F+VP +Y+S+QSVL L
Sbjct: 101 YNPKANREKMTQIMFESFDVPAMYVSMQSVLYL 133
>AT2G42170.1 | chr2:17578683-17580222 FORWARD LENGTH=330
Length = 329
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 63 MADLDFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYF 122
M + D F+GD+A + SG+ T +P+ HG V +WD ME+ W ++ LR PEEH
Sbjct: 4 MNENDLFVGDDAEA---RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 123 LLTDSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
LLT++P++ RE +IMFETF VP +YI +Q+ LSL A
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHA 101
>AT3G27000.1 | chr3:9952787-9955784 REVERSE LENGTH=390
Length = 389
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 6 RPAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMAD 65
+ VV DNGTGY K GF+G + P P VV ++S M
Sbjct: 4 KNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVK------------ 51
Query: 66 LDFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
D +G+ L + +P+++G V +WD ME W +N L+ NP + LLT
Sbjct: 52 -DIVVGETCSELRHQLDI---NYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLT 107
Query: 126 DSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
D P++ ++RE E MFE +N G++I +Q+VL+L A
Sbjct: 108 DPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYA 145
>AT1G18450.1 | chr1:6348199-6351766 FORWARD LENGTH=442
Length = 441
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESF------LDQSEMCSSANWIAQYNAG 61
A+V+D G+ K G++G P P+V+ + +D ++ S++ +
Sbjct: 9 AIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTESEK 68
Query: 62 VMADLDFFIGDEALSLFKSSGLYTRKH-----PINHGQVDDWDTMERFWQQCIFNYLRCN 116
+ ++G +A+S Y R H PI G V DWD ++ W+ + L +
Sbjct: 69 EKSKRKLYVGSQAMS-------YRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMID 121
Query: 117 PEEHYFLLTDSPVSTPESRECAGEIMFETFNVPGLYISVQSVL-SLSAGYA 166
P EH LL + P++T + RE A E+MFE + VP L+++ VL S + G A
Sbjct: 122 PTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRA 172
>AT1G73910.1 | chr1:27789293-27790187 FORWARD LENGTH=146
Length = 145
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV-AVNESFLDQSEMCSSANWIAQYNAGVMADL 66
A+V+D G+ K G++G P P+VV A++ + +D + ++ A+ +
Sbjct: 9 AIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTE-DAKESDKEKGKR 67
Query: 67 DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTD 126
+ G +AL+ F+ + P G V DWD ++ W N L +P EH LL +
Sbjct: 68 KLYTGSQALN-FRRDQMEILS-PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAE 125
Query: 127 SPVSTPESRECAGEIMFETF 146
P+++ + RE +G F TF
Sbjct: 126 PPLNSQQQREKSG---FSTF 142
>AT3G60830.1 | chr3:22474298-22476000 FORWARD LENGTH=364
Length = 363
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 89 PINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDSPVSTPES-RECAGEIMFETFN 147
PI G + DWD ME + ++ L +L P+ TP++ RE ++MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 148 VPGLYISVQSVLSLSA 163
V G Y S Q+VLSL A
Sbjct: 117 VSGFYASEQAVLSLYA 132
>AT3G33520.1 | chr3:14093791-14095476 REVERSE LENGTH=422
Length = 421
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 28/157 (17%)
Query: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVV---AVNESFLDQSEMCSSANWIAQYNAGVMAD 65
VV+DNG G K G G +P IP + ++ F+ S + + ++ I +A V
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTTLSDEIDLTSAAV--- 61
Query: 66 LDFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
+ PI+ G + + D W + L P LLT
Sbjct: 62 ---------------------RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLT 100
Query: 126 DSPVSTPESRECAGEIMFETFNVPGLYIS-VQSVLSL 161
++P+S P + E++FE F LYI+ QS++ L
Sbjct: 101 EAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHL 137
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,127,966
Number of extensions: 164764
Number of successful extensions: 352
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 337
Number of HSP's successfully gapped: 17
Length of query: 180
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 88
Effective length of database: 8,584,297
Effective search space: 755418136
Effective search space used: 755418136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 108 (46.2 bits)