BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0125300 Os08g0125300|AK071597
         (1427 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1  | chr4:12129485-12134086 FORWARD LENGTH=1263         355   1e-97
ATMG00810.1  | chrM:227709-228431 REVERSE LENGTH=241              139   1e-32
ATMG00820.1  | chrM:228573-229085 REVERSE LENGTH=171               91   6e-18
ATMG00240.1  | chrM:68918-69253 REVERSE LENGTH=112                 62   2e-09
ATMG00710.1  | chrM:207553-207915 REVERSE LENGTH=121               53   1e-06

>AT4G23160.1 | chr4:12129485-12134086 FORWARD LENGTH=1263
          Length = 1262

 Score =  355 bits (911), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 194/525 (36%), Positives = 284/525 (54%), Gaps = 8/525 (1%)

Query: 903  HDGDALLAEMEEPSSYREAAGQPAWENAMAQELQAIEKNSTWALTALPAGHKPIGLKWVY 962
            H     +A+ +EPS+Y EA     W  AM  E+ A+E   TW +  LP   KPIG KWVY
Sbjct: 74   HSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVY 133

Query: 963  KLKKNTAGEVIKHKARLVAKGYVQRQGVDFEEVFAPVARLDTVRVILAIAADRRWEVHHL 1022
            K+K N+ G + ++KARLVAKGY Q++G+DF E F+PV +L +V++ILAI+A   + +H L
Sbjct: 134  KIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQL 193

Query: 1023 DVKSAFLNGDLEEEVYVAQPEGFVKRGEEHL----VLRLSKALYGLRQAPRAWNTRLDKC 1078
            D+ +AFLNGDL+EE+Y+  P G+  R  + L    V  L K++YGL+QA R W  +    
Sbjct: 194  DISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVT 253

Query: 1079 LKELGFARCTQEQAVYTRGKGQAGVIVGVYVDDLIVTGENPHEIAMFKQQMMGEFEMSDL 1138
            L   GF +   +   + +      + V VYVDD+I+   N   +   K Q+   F++ DL
Sbjct: 254  LIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313

Query: 1139 GLLSYYLGIEVIQGENGXXXXXXXXXXXXLSQFGMQGCNPTSIPMEPRSLLHKDADGNPI 1198
            G L Y+LG+E+ +   G            L + G+ GC P+S+PM+P       + G+ +
Sbjct: 314  GPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV 373

Query: 1199 DATEYRRVIGCLRYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLDSGLV 1258
            DA  YRR+IG L YL  TR D+S+AV   S+F E P   H +AV  IL Y+KGT+  GL 
Sbjct: 374  DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL- 432

Query: 1259 FASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCEXXXX 1318
            F S    + +  F+D+      D RRST G   ++ +SL+SW S+KQ+ V+ SS E    
Sbjct: 433  FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492

Query: 1319 XXXXXXXXXXXXXXXXSEMMGTEAKRVKLFVDNKSAIALMKNPVFHGRSKHIDTRYHFIR 1378
                             E+    +K   LF DN +AI +  N VFH R+KHI++  H +R
Sbjct: 493  ALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552

Query: 1379 E-CVESGQILIEFVRSEEQRADAMTKGLPAAKLATARHLLGVRDL 1422
            E  V    +   F   +EQ  D  T+ L      T  +++ +  L
Sbjct: 553  ERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGL 595



>ATMG00810.1 | chrM:227709-228431 REVERSE LENGTH=241
          Length = 240

 Score =  139 bits (351), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 2/208 (0%)

Query: 1107 VYVDDLIVTGENPHEIAMFKQQMMGEFEMSDLGLLSYYLGIEVIQGENGXXXXXXXXXXX 1166
            +YVDD+++TG +   + M   Q+   F M DLG + Y+LGI++    +G           
Sbjct: 5    LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 1167 XLSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGV 1226
             L+  GM  C P S P+ P  L    +     D +++R ++G L+YL  TRPD+SYAV +
Sbjct: 65   ILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 123

Query: 1227 ASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRST 1286
              + M  PT      +K +LRY+KGT+  GL     S  L++  F DSD AG    RRST
Sbjct: 124  VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNS-KLNVQAFCDSDWAGCTSTRRST 182

Query: 1287 GGMAFYVNSSLVSWCSQKQKTVALSSCE 1314
             G   ++  +++SW +++Q TV+ SS E
Sbjct: 183  TGFCTFLGCNIISWSAKRQPTVSRSSTE 210



>ATMG00820.1 | chrM:228573-229085 REVERSE LENGTH=171
          Length = 170

 Score = 90.5 bits (223), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 60/100 (60%)

Query: 913  EEPSSYREAAGQPAWENAMAQELQAIEKNSTWALTALPAGHKPIGLKWVYKLKKNTAGEV 972
            +EP S   A   P W  AM +EL A+ +N TW L   P     +G KWV+K K ++ G +
Sbjct: 26   KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTL 85

Query: 973  IKHKARLVAKGYVQRQGVDFEEVFAPVARLDTVRVILAIA 1012
             + KARLVAKG+ Q +G+ F E ++PV R  T+R IL +A
Sbjct: 86   DRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125



>ATMG00240.1 | chrM:68918-69253 REVERSE LENGTH=112
          Length = 111

 Score = 62.4 bits (150), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 1212 YLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGF 1271
            YL  TRPDL++AV   S+F     T  ++AV  +L Y+KGT+  GL F S +  L +  F
Sbjct: 2    YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGL-FYSATSDLQLKAF 60

Query: 1272 TDSDLAGDMDDRRSTGG 1288
             DSD A   D RRS  G
Sbjct: 61   ADSDWASCPDTRRSVTG 77



>ATMG00710.1 | chrM:207553-207915 REVERSE LENGTH=121
          Length = 120

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 662 NRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRTPFEAWTGRKPQLGHL 721
           NR+++   RS++    +P  F  +A   AV+++N+ P+ A+    P E W    P   +L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 722 RVFGCIAHAKITTPNQKKLDDRSAPYVYLGVEEGS 756
           R FGC+A+      ++ KL  R+      G E+GS
Sbjct: 62  RRFGCVAYIHC---DEGKLKPRAKK----GEEKGS 89



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 27,746,970
Number of extensions: 1125684
Number of successful extensions: 2483
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 2482
Number of HSP's successfully gapped: 5
Length of query: 1427
Length of database: 11,106,569
Length adjustment: 111
Effective length of query: 1316
Effective length of database: 8,063,393
Effective search space: 10611425188
Effective search space used: 10611425188
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 118 (50.1 bits)