BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0120200 Os08g0120200|AK103562
(799 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24790.1 | chr4:12778222-12781345 FORWARD LENGTH=858 402 e-112
AT2G02480.1 | chr2:661093-665337 FORWARD LENGTH=1219 314 1e-85
AT1G14460.1 | chr1:4948962-4952750 REVERSE LENGTH=1117 312 4e-85
AT4G18820.1 | chr4:10330371-10334090 FORWARD LENGTH=1098 297 1e-80
AT5G45720.1 | chr5:18543338-18546629 REVERSE LENGTH=967 275 6e-74
AT1G21690.3 | chr1:7615675-7618421 FORWARD LENGTH=342 81 2e-15
>AT4G24790.1 | chr4:12778222-12781345 FORWARD LENGTH=858
Length = 857
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 323/490 (65%), Gaps = 18/490 (3%)
Query: 148 ARSLLQKYRPKAFSELAGQNVVAQSLSSAVLKGKLAPIYLFHGPHGIGKTSAARIFAASL 207
+RSL QK+RPK+F EL GQ VV + L S +L+G++ +YLFHGP G GKTS ++IFAA+L
Sbjct: 238 SRSLSQKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTSTSKIFAAAL 297
Query: 208 NCHSSGGN-QPCGHCEECMAIFSGNSSSVIEIDASKLDCKSRVAALLRNACEVPASSHFK 266
NC S + +PCG C EC + FSG V+E D+ KL+ S + +L+++A P SS FK
Sbjct: 298 NCLSQAAHSRPCGLCSECKSYFSGRGRDVMETDSGKLNRPSYLRSLIKSASLPPVSSRFK 357
Query: 267 VLIVDDCQHMDKEGWYSVYSSLEGIPDSSIFVMITSDIDKLPSNSVGWCQSYRFCKVDEA 326
V I+D+CQ + +E W ++ +SL+ S+F+++TS+++KLP N + Q Y F KV +A
Sbjct: 358 VFIIDECQLLCQETWGTLLNSLDNFSQHSVFILVTSELEKLPRNVLSRSQKYHFSKVCDA 417
Query: 327 EIALRLSRICINEGMEFEAEALELIARKANGSIRDAVQMLDQLTLLGKRISKSVTYDLIG 386
+I+ +L++ICI EG++F+ A++ IA K++GS+RDA MLDQL+LLGKRI+ S+ Y LIG
Sbjct: 418 DISTKLAKICIEEGIDFDQGAVDFIASKSDGSLRDAEIMLDQLSLLGKRITTSLAYKLIG 477
Query: 387 DVSDEELLDLLNLAFSSDAATIVRRARELLSSKVDPLQLLAQLANLIMDILAGRHQSDSQ 446
VSD+ELLDLL+LA SSD + V RAREL+ SK+DP+QL++QLAN+IMDI+AG Q S
Sbjct: 478 VVSDDELLDLLDLAMSSDTSNTVIRARELMRSKIDPMQLISQLANVIMDIIAGNSQESSS 537
Query: 447 EVR-KVTGKHTSAEIDVHKLRNALEILSETEKQLKTTKNQSTWLTAALLQFNMREPYCLD 505
R + +HTS E ++ KLRNAL+ILS+ EK L+ +KNQ+TWLT ALLQ L
Sbjct: 538 ATRLRFLTRHTSEE-EMQKLRNALKILSDAEKHLRASKNQTTWLTVALLQ--------LS 588
Query: 506 DAAVSSMFTESQTDDGAAILKDESLDTSSHLCYQNKIGCLDMNLGDP----DVLETIWIK 561
+ SS T+ + I KD L ++S C + I D G + +E++W
Sbjct: 589 NTDSSSFATDENGRN--QINKDVELSSTSSGCPGDVIKS-DAEKGQERNCNETVESVWKT 645
Query: 562 ALENCTSKPLHSLLRKDGKLSSLYTTQGVAVAELQFCHPEDVPTTESFWNPFVVSLQNLL 621
+ C S L L K G+L+SL +GVA+AEL+F P+ V E W S Q++L
Sbjct: 646 VTDLCCSDSLKRFLWKRGRLTSLTVDKGVAIAELEFYTPQHVARAEKSWKLIADSFQSVL 705
Query: 622 KCNVDIRINL 631
CNV+I++NL
Sbjct: 706 GCNVEIQMNL 715
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 1 MIEGRRHSVDIPISRALLAVMRSRSLRDPETNSLAKFSA--KKTIWE 45
M E RRHSVD+PI+R L+A+ R RSLRDP T S++KF++ WE
Sbjct: 1 MGETRRHSVDVPITRTLVALRRVRSLRDPCTTSMSKFASLLDNVKWE 47
>AT2G02480.1 | chr2:661093-665337 FORWARD LENGTH=1219
Length = 1218
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/569 (35%), Positives = 304/569 (53%), Gaps = 61/569 (10%)
Query: 122 TKDRASSLMIEGEQLGRREGATFQESARSLLQKYRPKAFSELAGQNVVAQSLSSAVLKGK 181
++D ++ ++GE+ EG+T E+ RS QKYRP F EL GQ++V QSL +AV + +
Sbjct: 426 SQDGLEAVALDGEE---EEGST-PETIRSFSQKYRPMFFEELIGQSIVVQSLMNAVKRSR 481
Query: 182 LAPIYLFHGPHGIGKTSAARIFAASLNCHSSGGNQPCGHCEECMAIFSGNSSSVIEIDAS 241
+AP+YLF GP G GKTS ARIF+A+LNC ++ +PCG+C+EC SG S E+D +
Sbjct: 482 IAPVYLFQGPRGTGKTSTARIFSAALNCVATEEMKPCGYCKECNDFMSGKSKDFWELDGA 541
Query: 242 KLDCKSRVAALLRNACEV--PASSHFKVLIVDDCQHMDKEGWYSVYSSLEGIPDSSIFVM 299
+V LL+N + SS +KV ++D+C + + W S LE +F+
Sbjct: 542 NKKGADKVRYLLKNLPTILPRNSSMYKVFVIDECHLLPSKTWLSFLKFLENPLQKVVFIF 601
Query: 300 ITSDIDKLPSNSVGWCQSYRFCKVDEAEIALRLSRICINEGMEFEAEALELIARKANGSI 359
IT+D++ +P CQ + F K+ +++I +RL +I +E ++ + AL+LIA A+GS+
Sbjct: 602 ITTDLENVPRTIQSRCQKFLFDKLKDSDIVVRLKKIASDENLDVDLHALDLIAMNADGSL 661
Query: 360 RDAVQMLDQLTLLGKRISKSVTYDLIGDVSDEELLDLLNLAFSSDAATIVRRARELLSSK 419
RDA ML+QL+LLGKRI+ ++ +L+G VSDE+LL+LL LA SSD A V+RARELL
Sbjct: 662 RDAETMLEQLSLLGKRITTALVNELVGVVSDEKLLELLELALSSDTAETVKRARELLDLG 721
Query: 420 VDPLQLLAQLANLIMDILAGRHQS-DSQEVRKVTGKHTSAEIDVHKLRNALEILSETEKQ 478
DP+ L++QLA+LIMDI+AG ++ D + E D+ L++AL++LSE EKQ
Sbjct: 722 ADPIVLMSQLASLIMDIIAGTYKVVDEKYSNAFFDGRNLTEADMEGLKHALKLLSEAEKQ 781
Query: 479 LKTTKNQSTWLTAALLQFNMREPYCLDDAAVSSMFTESQTDDGAAILKDESLDTSSHL-- 536
L+ + ++STW TA LLQ S + TDD A + E + +
Sbjct: 782 LRVSNDRSTWFTATLLQLGSMPSPGTTHTGSSRRQSSRATDDDPASVSREVMAYKQRIGG 841
Query: 537 ---------------------------------CY------------------QNKIG-C 544
CY +N I
Sbjct: 842 LHFSKSASPASVIKRNGNHSHEAKPFSRVIDNNCYKSSSSSQMIESEGSIASHENSIAST 901
Query: 545 LDMNLGDPDVLETIWIKALENCTSKPLHSLLRKDGKLSSLYTTQGVAVAELQFCHPEDVP 604
+ +N + L IW K +E C SK L LL GKL S+ +G+ VA + F +
Sbjct: 902 MMLNQRSSEKLNDIWRKCIERCHSKTLRQLLYTHGKLISISEVEGILVAYIAFGENDIKL 961
Query: 605 TTESFWNPFVVSLQNLLKCNVDIRINLSP 633
E F + S++ +L+ +V++RI L P
Sbjct: 962 RAERFLSSITNSIEMVLRRSVEVRIILLP 990
>AT1G14460.1 | chr1:4948962-4952750 REVERSE LENGTH=1117
Length = 1116
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 200/528 (37%), Positives = 297/528 (56%), Gaps = 42/528 (7%)
Query: 146 ESARSLLQKYRPKAFSELAGQNVVAQSLSSAVLKGKLAPIYLFHGPHGIGKTSAARIFAA 205
ES +SL QKY+P F EL GQ++V QSL +AV KG++A +YLF GP G GKTS ARI +A
Sbjct: 419 ESIQSLSQKYKPMFFDELIGQSIVVQSLMNAVKKGRVAHVYLFQGPRGTGKTSTARILSA 478
Query: 206 SLNCHS-SGGNQPCGHCEECMAIFSGNSSSVIEIDASKLDCKSRVAALLRNACEV-PASS 263
+LNC + +PCG+C+EC G S ++E+DA K + +V LL+ + P SS
Sbjct: 479 ALNCDVVTEEMKPCGYCKECSDYMLGKSRDLLELDAGKKNGAEKVRYLLKKLLTLAPQSS 538
Query: 264 H-FKVLIVDDCQHMDKEGWYSVYSSLEGIPDSSIFVMITSDIDKLPSNSVGWCQSYRFCK 322
+KV ++D+C + W S+ LE +FV IT+D+D +P CQ Y F K
Sbjct: 539 QRYKVFVIDECHLLPSRTWLSLLKFLENPLQKFVFVCITTDLDNVPRTIQSRCQKYIFNK 598
Query: 323 VDEAEIALRLSRICINEGMEFEAEALELIARKANGSIRDAVQMLDQLTLLGKRISKSVTY 382
V + +I +RL +I +E ++ E++AL+LIA A+GS+RDA ML+QL+L+GKRI+ +
Sbjct: 599 VRDGDIVVRLRKIASDENLDVESQALDLIALNADGSLRDAETMLEQLSLMGKRITVDLVN 658
Query: 383 DLIGDVSDEELLDLLNLAFSSDAATIVRRARELLSSKVDPLQLLAQLANLIMDILAGRHQ 442
+L+G VSD++LL+LL LA SSD A V++ARELL DP+ +++QLA+LIMDI+AG ++
Sbjct: 659 ELVGVVSDDKLLELLELALSSDTAETVKKARELLDLGADPILMMSQLASLIMDIIAGAYK 718
Query: 443 S-DSQEVRKVTGKHTSAEIDVHKLRNALEILSETEKQLKTTKNQSTWLTAALLQF-NMRE 500
+ D + + E D+ +L++AL++LSE EKQL+ + ++STW A LLQ +M
Sbjct: 719 ALDEKYSEAFLDRRNLTEADLERLKHALKLLSEAEKQLRVSTDRSTWFIATLLQLGSMPS 778
Query: 501 PYCLDDAAV---SSMFTE------------------SQTDDGAAILKDESL--------- 530
P + SS TE S T +I K +L
Sbjct: 779 PGTTHTGSSRRQSSRATEESISREVIAYKQRSGLQCSNTASPTSIRKSGNLVREVKLSSS 838
Query: 531 -------DTSSHLCYQNKIGCLDMNLGDPDVLETIWIKALENCTSKPLHSLLRKDGKLSS 583
DTS + + + + L IWIK ++ C SK L LL GKL S
Sbjct: 839 SSEVLESDTSMASHDDTTASTMTLTCRNSEKLNDIWIKCVDRCHSKTLKQLLYAHGKLLS 898
Query: 584 LYTTQGVAVAELQFCHPEDVPTTESFWNPFVVSLQNLLKCNVDIRINL 631
+ +G+ VA + F E E F + S++ +L+ NV++RI L
Sbjct: 899 ISEVEGILVAYIAFGEGEIKARAERFVSSITNSIEMVLRRNVEVRIIL 946
>AT4G18820.1 | chr4:10330371-10334090 FORWARD LENGTH=1098
Length = 1097
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 272/491 (55%), Gaps = 17/491 (3%)
Query: 145 QESARSLLQKYRPKAFSELAGQNVVAQSLSSAVLKGKLAPIYLFHGPHGIGKTSAARIFA 204
++ +SL +KY PK F +L GQN+V Q+LS+AV + KL +Y+FHGP+G GKTS ARIFA
Sbjct: 427 RQQHQSLTEKYTPKTFRDLLGQNLVVQALSNAVARRKLGLLYVFHGPNGTGKTSCARIFA 486
Query: 205 ASLNCHSSGGNQPCGHCEECMAIFSGNSSSVIEIDASKLDCKSRVAALLRNACEVPASSH 264
+LNCHS +PCG C C++ G S ++ E+ ++ LL V + S
Sbjct: 487 RALNCHSMEQPKPCGTCSSCVSHDMGKSWNIREVGPVGNYDFEKIMDLLDGNVMVSSQSP 546
Query: 265 FKVLIVDDCQHMDKEGWYSVYSSLE-GIPDSSIFVMITSDIDKLPSNSVGWCQSYRFCKV 323
+V I DDC + + W ++ ++ P +F+++ S +D LP + CQ + F K+
Sbjct: 547 -RVFIFDDCDTLSSDCWNALSKVVDRAAPRHVVFILVCSSLDVLPHVIISRCQKFFFPKL 605
Query: 324 DEAEIALRLSRICINEGMEFEAEALELIARKANGSIRDAVQMLDQLTLLGKRISKSVTYD 383
+A+I L I E +E + +AL+LIA +++GS+RDA L+QL+LLG+RIS + +
Sbjct: 606 KDADIVYSLQWIASKEEIEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQE 665
Query: 384 LIGDVSDEELLDLLNLAFSSDAATIVRRARELLSSKVDPLQLLAQLANLIMDILAGRHQ- 442
L+G VSDE+L+DLL+LA S+D V+ R ++ + V+PL L++QLA +I DILAG +
Sbjct: 666 LVGLVSDEKLVDLLDLALSADTVNTVKNLRTIMETSVEPLALMSQLATVITDILAGSYDF 725
Query: 443 SDSQEVRKVTGKHTSAEIDVHKLRNALEILSETEKQLKTTKNQSTWLTAALLQFNMREPY 502
+ Q RK + + D+ KLR AL+ LSE EKQL+ + ++ TWLTAALLQ + Y
Sbjct: 726 TKDQHKRKFFRRQPLPKEDMEKLRQALKTLSEAEKQLRVSNDKLTWLTAALLQLAPDQNY 785
Query: 503 CLDDAAVSSMFTESQTDDGAAILKDESLDTSSHLCYQNKIGCLDMNLGDP----DVLETI 558
L + S D G D LD SS G LD GD +E I
Sbjct: 786 LLQRS--------STADTGGRESSDHHLDPSSDAAGGRSSG-LDRRRGDSRKNRPAVEEI 836
Query: 559 WIKALENCTSKPLHSLLRKDGKLSSLYTTQGVAVAELQFCHPEDVPTTESFWNPFVVSLQ 618
W++ +E L L K+G++ SL V L F P T E F + + + +
Sbjct: 837 WLEVIEKLRVNGLREFLYKEGRIVSLNLGSAPTV-HLMFSSPLTKSTAEKFRSHIMQAFE 895
Query: 619 NLLKCNVDIRI 629
+L+ V I I
Sbjct: 896 AVLESPVTIEI 906
>AT5G45720.1 | chr5:18543338-18546629 REVERSE LENGTH=967
Length = 966
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 171/516 (33%), Positives = 281/516 (54%), Gaps = 31/516 (6%)
Query: 126 ASSLMIEGEQ--LGRREGATFQESARSLLQKYRPKAFSELAGQNVVAQSLSSAVLKGKLA 183
A +L+ G+ +G++ +S QKY P+ F +L GQN+V Q+LS+A+ K ++
Sbjct: 318 ADNLLKNGKDSVIGKKSSRKNTRWHQSFTQKYAPRTFRDLLGQNLVVQALSNAIAKRRVG 377
Query: 184 PIYLFHGPHGIGKTSAARIFAASLNCHSSGGNQPCGHCEECMAIFSGNSSSVIEIDASK- 242
+Y+FHGP+G GKTS AR+FA +LNCHS+ ++PCG C C++ G + + E+ K
Sbjct: 378 LLYVFHGPNGTGKTSCARVFARALNCHSTEQSKPCGVCSSCVSYDDGKNRYIREMGPVKS 437
Query: 243 LDCKSRVAALLRNACEVPASSHFKVLIVDDCQHMDKEGWYSVYSSLEGIPDSSIFVMITS 302
D ++ LL VLI DDC M + W ++ ++ P +FV++ S
Sbjct: 438 FDFEN----LLDKTNIRQQQKQQLVLIFDDCDTMSTDCWNTLSKIVDRAPRRVVFVLVCS 493
Query: 303 DIDKLPSNSVGWCQSYRFCKVDEAEIALRLSRICINEGMEFEAEALELIARKANGSIRDA 362
+D LP V CQ + F K+ + +I L I E ++ + +AL+L+A +++GS+RDA
Sbjct: 494 SLDVLPHIIVSRCQKFFFPKLKDVDIIDSLQLIASKEEIDIDKDALKLVASRSDGSLRDA 553
Query: 363 VQMLDQLTLLGKRISKSVTYDLIGDVSDEELLDLLNLAFSSDAATIVRRARELLSSKVDP 422
L+QL+LLG RIS + +++G +SDE+L+DLL+LA S+D V+ R ++ + ++P
Sbjct: 554 EMTLEQLSLLGTRISVPLVQEMVGLISDEKLVDLLDLALSADTVNTVKNLRIIMETGLEP 613
Query: 423 LQLLAQLANLIMDILAGRHQ-SDSQEVRKVTGKHTSAEIDVHKLRNALEILSETEKQLKT 481
L L++QLA +I DILAG + + Q RK + ++ D+ KL+ AL+ LSE+EKQL+
Sbjct: 614 LALMSQLATVITDILAGSYDFTKDQCKRKFFRRQPLSKEDMEKLKQALKTLSESEKQLRV 673
Query: 482 TKNQSTWLTAALLQFNMREPYCL-DDAAVSSMFTESQTDDGAAILKDESLDTSSHLCYQN 540
+ ++ TWLTAALLQ + Y L ++ + F + D D S+H+
Sbjct: 674 SNDKLTWLTAALLQLAPDKQYLLPHSSSADASFNHTPLTDS---------DPSNHVVAGT 724
Query: 541 K-------IGCLDMNLGDPDVLETIWIKALENCTSKPLHSLLRKDGKLSSLYTTQGVAVA 593
+ C + P V E IW+ +EN L L K+GK+ S+ + +
Sbjct: 725 RRDDSKQGFSCKNR----PSV-EDIWLAVIENVRVNGLREFLYKEGKIFSI-SIGSAPMV 778
Query: 594 ELQFCHPEDVPTTESFWNPFVVSLQNLLKCNVDIRI 629
+L F P T E+F + + + +L V + +
Sbjct: 779 QLMFNSPIAKSTAENFEEHILKAFEAVLGSPVTLEM 814
>AT1G21690.3 | chr1:7615675-7618421 FORWARD LENGTH=342
Length = 341
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 42/358 (11%)
Query: 142 ATFQESARSLLQKYRPKAFSELAGQNVVAQSLSSAVLKGKLAPIYLFHGPHGIGKTSAAR 201
A +S++ ++KYRPK ++A Q V + L++ L+ P LF+GP G GKT+ A
Sbjct: 2 APVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNT-LQTADCPHMLFYGPPGTGKTTTAL 60
Query: 202 IFAASLNCHSSGGNQPCGHCEECMAIFSGNSSSVIEIDASKLDCKSRVAALLRNACEVPA 261
A H G + S V+E++AS + V +++ V
Sbjct: 61 AIA-----HQLFGPEL-------------YKSRVLELNASDDRGINVVRTKIKDFAAVAV 102
Query: 262 SSH----------FKVLIVDDCQHMDKEGWYSVYSSLEGIPDSSIFVMITSDIDKLPSNS 311
S+ FK++I+D+ M ++ ++ ++E + F I + I ++
Sbjct: 103 GSNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPL 162
Query: 312 VGWCQSYRFCKVDEAEIALRLSRICINEGMEFEAEALELIARKANGSIRDAVQMLDQLT- 370
C +RF + E ++ R+ IC EG+ + EAL ++ + G +R A+ L T
Sbjct: 163 ASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATR 222
Query: 371 LLGKRISKSVTYDLIGDVSDEELLDLLNLAFSSDAATIVRRARELLSSKVDPLQLLAQLA 430
L G I+ + DL+ +VS L+++N F++ + A + + + V +Q+
Sbjct: 223 LFGSTITST---DLL-NVSGVVPLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQII 278
Query: 431 NLIMDILAGRHQSDSQEVRKVTGKHTSAEIDVHKL-------RNALEILSETEKQLKT 481
N + DI+A SD +++K AE D + L R ++IL E + LKT
Sbjct: 279 NQLFDIVA-EADSDITDMQKAKICKCLAETDKYNLCPLRNGSRLLMQILLELDLCLKT 335
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,320,906
Number of extensions: 659178
Number of successful extensions: 2140
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 2121
Number of HSP's successfully gapped: 11
Length of query: 799
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 692
Effective length of database: 8,173,057
Effective search space: 5655755444
Effective search space used: 5655755444
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)