BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0109000 Os08g0109000|AK107316
(401 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63640.1 | chr5:25478935-25481221 FORWARD LENGTH=448 323 1e-88
AT4G32760.2 | chr4:15799376-15803832 FORWARD LENGTH=677 185 5e-47
AT1G76970.1 | chr1:28922841-28924854 REVERSE LENGTH=447 175 5e-44
AT1G21380.1 | chr1:7485806-7488032 REVERSE LENGTH=507 174 8e-44
AT3G08790.1 | chr3:2667881-2671001 FORWARD LENGTH=608 172 3e-43
AT5G01760.1 | chr5:291753-294127 FORWARD LENGTH=543 135 3e-32
AT2G38410.1 | chr2:16086912-16090047 REVERSE LENGTH=672 96 3e-20
AT5G16880.1 | chr5:5549658-5551274 FORWARD LENGTH=408 69 6e-12
>AT5G63640.1 | chr5:25478935-25481221 FORWARD LENGTH=448
Length = 447
Score = 323 bits (827), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/427 (45%), Positives = 247/427 (57%), Gaps = 64/427 (14%)
Query: 1 MASEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVM 60
MA+E+V +ATSEKL ++DWAKNIEICEL A+D +AKDVIK IKK LGS++ NTQLYAV
Sbjct: 1 MAAELVSSATSEKLADVDWAKNIEICELAARDERQAKDVIKAIKKRLGSKNPNTQLYAVQ 60
Query: 61 LLEMLMNNCGEPIHKQVIDNGXXXXXXXXXXXXTELPVREKIFLLLDATQTSLGGVKGKF 120
LLEMLMNN GE IHKQVID G ++LPVRE+IFLLLDATQTSLGG GKF
Sbjct: 61 LLEMLMNNIGENIHKQVIDTGVLPTLVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKF 120
Query: 121 PQYYGAYYELVSAGVQFSNRXXXXXXXXXXXXXXXXXXIEPNNNSLSRRLDEG---QKEV 177
PQYY AYYELV+AGV+F+ R N L+ +EG ++
Sbjct: 121 PQYYTAYYELVNAGVKFTQRPNATPVVVTAQAVPRNTL----NEQLASARNEGPATTQQR 176
Query: 178 HAQPVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVM 237
+Q VS SSI++KAS+ +E+LK+VLD++D ++PEGA DEF LDLVEQC+FQK+R+MHLVM
Sbjct: 177 ESQSVSPSSILQKASTALEILKEVLDAVDSQNPEGAKDEFTLDLVEQCSFQKERVMHLVM 236
Query: 238 TSRDEVVVSQAIELNEELHKVLVRHDALLSVQPTTTVASTLKXXXXXDAE---------- 287
TSRDE VS+AIELNE+L ++L RH+ LLS + T ST + E
Sbjct: 237 TSRDEKAVSKAIELNEQLQRILNRHEDLLSGRITVPSRSTTSNGYHSNLEPVRPISNGDQ 296
Query: 288 -----------------------------------SLYRRLRKGKALSEDYTDDSIPSFR 312
L+RRLRKGKA + ++ +
Sbjct: 297 KRELKASNANTESSSFISNRAHLKLEEEDEEEEPEQLFRRLRKGKARARPEDEEEPSPPQ 356
Query: 313 SIP-----EDKMRRPLTIE-PSNTDKKLGALNIRSPYPEARPDVLIPPPPAKHAERERFF 366
+P +++ RPL PS + G + +SP P AKH ERE+FF
Sbjct: 357 GLPGSAIHNERLNRPLIRPLPSEEASRGGDSHSQSPPVVIPPPP------AKHVEREKFF 410
Query: 367 REKSMDA 373
+E D
Sbjct: 411 KENKGDG 417
>AT4G32760.2 | chr4:15799376-15803832 FORWARD LENGTH=677
Length = 676
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 151/275 (54%), Gaps = 3/275 (1%)
Query: 1 MASEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVM 60
M + MV+ ATSE L DWA N+EIC+++ DP +AKDV+K IKK +GSR+ QL A+
Sbjct: 1 MVNAMVERATSEMLIGPDWAMNLEICDMLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALT 60
Query: 61 LLEMLMNNCGEPIHKQVIDNGXXXXXXXXXXXXTELPVREKIFLLLDATQTSLGGVKGKF 120
LLE ++ NCG+ +H V + G + V+EKI +L+D Q + GG + ++
Sbjct: 61 LLETIVKNCGDMVHMHVAEKGVIHEMVRIVKKKPDFHVKEKILVLIDTWQEAFGGPRARY 120
Query: 121 PQYYGAYYELVSAGVQFSNRXXXXXXXXXXXXXXXXXXIEPN--NNSLSRRLDEGQKEVH 178
PQYY Y EL+ AG F R PN N + E E
Sbjct: 121 PQYYAGYQELLRAGAVFPQRSERSAPVFTPPQTQPLTSYPPNLRNAGPGNDVPEPSAEPE 180
Query: 179 AQPVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVMT 238
P S I+ A +M+VL ++L +++P + E E ++DLVEQC KQR++HLV +
Sbjct: 181 F-PTLSLSEIQNAKGIMDVLAEMLSALEPGNKEDLKQEVMVDLVEQCRTYKQRVVHLVNS 239
Query: 239 SRDEVVVSQAIELNEELHKVLVRHDALLSVQPTTT 273
+ DE ++ Q + LN++L +VL ++A+ S P T+
Sbjct: 240 TSDESLLCQGLALNDDLQRVLTNYEAIASGLPGTS 274
>AT1G76970.1 | chr1:28922841-28924854 REVERSE LENGTH=447
Length = 446
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 148/269 (55%), Gaps = 14/269 (5%)
Query: 2 ASEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVML 61
A+ + AT++ L DWA NIE+C+L+ DP +AK+ +K +KK LGS++ Q+ A+
Sbjct: 5 AAACAERATNDMLIGPDWAINIELCDLINMDPSQAKEAVKVLKKRLGSKNSKVQILALYA 64
Query: 62 LEMLMNNCGEPIHKQVIDNGXXXXXXXXXXXXTELPVREKIFLLLDATQTSLGGVKGKFP 121
LE L NCGE +++ +ID G EL VREKI LLD Q + GG G++P
Sbjct: 65 LETLSKNCGENVYQLIIDRGLLNDMVKIVKKKPELNVREKILTLLDTWQEAFGGRGGRYP 124
Query: 122 QYYGAYYELVSAGVQFSNRXXXXXXXXXXXXXXXXXXIEPNNNSLSRRLDEGQKEVHAQP 181
QYY AY +L SAG++F R +P+ ++ Q +
Sbjct: 125 QYYNAYNDLRSAGIEFPPR------TESSLSFFTPPQTQPDEDAAI------QASLQGDD 172
Query: 182 VSESSI--IRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVMTS 239
S S+ I+ A ++VL D+L + DP +PE +E ++DLVEQC ++R+M LV T+
Sbjct: 173 ASSLSLEEIQSAEGSVDVLMDMLGAHDPGNPESLKEEVIVDLVEQCRTYQRRVMTLVNTT 232
Query: 240 RDEVVVSQAIELNEELHKVLVRHDALLSV 268
DE ++ Q + LN+ L VL RHD + +V
Sbjct: 233 TDEELLCQGLALNDNLQHVLQRHDDIANV 261
>AT1G21380.1 | chr1:7485806-7488032 REVERSE LENGTH=507
Length = 506
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 144/264 (54%), Gaps = 6/264 (2%)
Query: 2 ASEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVML 61
A+ + AT++ L DWA NIE+C+++ +P +AK+ +K +KK LGS++ Q+ A+
Sbjct: 5 AAACAERATNDMLIGPDWAINIELCDIINMEPSQAKEAVKVLKKRLGSKNSKVQILALYA 64
Query: 62 LEMLMNNCGEPIHKQVIDNGXXXXXXXXXXXXTELPVREKIFLLLDATQTSLGGVKGKFP 121
LE L NCGE +++ ++D +L VREKI LLD Q + GG G+FP
Sbjct: 65 LETLSKNCGESVYQLIVDRDILPDMVKIVKKKPDLTVREKILSLLDTWQEAFGGSGGRFP 124
Query: 122 QYYGAYYELVSAGVQFSNRXXXXXXXXXXXXXXXXXXIEPNNNSLSRRLDEGQKEVHAQP 181
QYY AY EL SAG++F R + S Q + +
Sbjct: 125 QYYNAYNELRSAGIEFPPRTESSVPFFTPPQTQPIVA----QATASDEDAAIQASLQSDD 180
Query: 182 VSESSI--IRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVMTS 239
S S+ I+ A ++VL D+L ++DP HPEG +E ++DLVEQC ++R+M LV T+
Sbjct: 181 ASALSMEEIQSAQGSVDVLTDMLGALDPSHPEGLKEELIVDLVEQCRTYQRRVMALVNTT 240
Query: 240 RDEVVVSQAIELNEELHKVLVRHD 263
DE ++ Q + LN+ L +VL HD
Sbjct: 241 SDEELMCQGLALNDNLQRVLQHHD 264
>AT3G08790.1 | chr3:2667881-2671001 FORWARD LENGTH=608
Length = 607
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 146/267 (54%), Gaps = 4/267 (1%)
Query: 1 MASEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVM 60
M +V ATS+ L DWA N+EIC+++ +PG+ ++V+ IKK L SR+ QL A+
Sbjct: 1 MVHPLVDRATSDMLIGPDWAMNLEICDMLNHEPGQTREVVSGIKKRLTSRTSKVQLLALT 60
Query: 61 LLEMLMNNCGEPIHKQVIDNGXXXXXXXXXXXXTELPVREKIFLLLDATQTSLGGVKGKF 120
LLE ++ NCGE IH QV + + V+EKI +L+D Q S G +G+
Sbjct: 61 LLETIITNCGELIHMQVAEKDILHKMVKMAKRKPNIQVKEKILILIDTWQESFSGPQGRH 120
Query: 121 PQYYGAYYELVSAGVQFSNRXXXXXXXXXXXXXXXXXXIEPNNNSLSRRLDEGQKEVHAQ 180
PQYY AY EL+ AG+ F R P N+ +R+
Sbjct: 121 PQYYAAYQELLRAGIVFPQRPQITPSSGQNGPSTRY----PQNSRNARQEAIDTSTESEF 176
Query: 181 PVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVMTSR 240
P + I+ A +M+VL ++++++D + EG E V+DLV QC KQR++HLV ++
Sbjct: 177 PTLSLTEIQNARGIMDVLAEMMNAIDGNNKEGLKQEVVVDLVSQCRTYKQRVVHLVNSTS 236
Query: 241 DEVVVSQAIELNEELHKVLVRHDALLS 267
DE ++ Q + LN++L ++L +H+A+ S
Sbjct: 237 DESMLCQGLALNDDLQRLLAKHEAIAS 263
>AT5G01760.1 | chr5:291753-294127 FORWARD LENGTH=543
Length = 542
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 6/266 (2%)
Query: 6 VKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVMLLEML 65
V ATSE L+ DW I IC+ + + + KD IK +K+ L +S QL + LLE +
Sbjct: 26 VDKATSELLRTPDWTIIIAICDSLNSNRWQCKDAIKAVKRRLQHKSSRVQLLTLTLLEAM 85
Query: 66 MNNCGEPIHKQVIDNGXXXXXXXXXXXXTELPVREKIFLLLDATQTSLGGVKGKFPQYYG 125
+ NCG+ +H + + + VR K+ +LLD + GV K P Y
Sbjct: 86 LKNCGDFVHSHIAEKHLLEDMVKLVRKKGDFEVRNKLLILLDTWNEAFSGVACKHPHYNW 145
Query: 126 AYYELVSAGVQFSNRXXXXXXXXXXXXXXXXXXIEPNNNSLS----RRLDEGQKEVHAQP 181
AY EL GV+F R + N +S RRLDE
Sbjct: 146 AYQELKRCGVKFPQRSKEAPLMLEPPPPVTQSSSSSSMNLMSIGSFRRLDETMATEIESL 205
Query: 182 VSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVMTSRD 241
S + +VM+++ D++ +++P DE ++DLVEQC +++++ ++ T+ D
Sbjct: 206 SLSSLESMR--NVMDLVNDMVQAVNPSDKSALKDELIVDLVEQCRSNQKKLIQMLTTTAD 263
Query: 242 EVVVSQAIELNEELHKVLVRHDALLS 267
E V+++ +ELN+ L VL RHDA+ S
Sbjct: 264 EDVLARGLELNDSLQVVLARHDAIAS 289
>AT2G38410.1 | chr2:16086912-16090047 REVERSE LENGTH=672
Length = 671
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 79/132 (59%)
Query: 9 ATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVMLLEMLMNN 68
ATS+ L DW N+EIC+ V +AKDV+K +KK L +S QL A+ LLE L+ N
Sbjct: 15 ATSDLLLGPDWTTNMEICDSVNSLHWQAKDVVKAVKKRLQHKSSRVQLLALTLLETLVKN 74
Query: 69 CGEPIHKQVIDNGXXXXXXXXXXXXTELPVREKIFLLLDATQTSLGGVKGKFPQYYGAYY 128
CG+ +H QV + ++ VR+KI +++D+ Q + GG +GK+PQYY AY
Sbjct: 75 CGDYLHHQVAEKNILGEMVKIVKKKADMQVRDKILVMVDSWQQAFGGPEGKYPQYYWAYD 134
Query: 129 ELVSAGVQFSNR 140
EL +GV+F R
Sbjct: 135 ELRRSGVEFPRR 146
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 167 SRRLDEGQK-EVHAQPVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQC 225
SRRLDE EV +S +R VM++L D+L ++DP E DE ++DLVE+C
Sbjct: 219 SRRLDEAMATEVEGLSLSSIESMRD---VMDLLGDMLQAVDPSDREAVKDEVIVDLVERC 275
Query: 226 TFQKQRIMHLVMTSRDEVVVSQAIELNEELHKVLVRHDALLSVQPTTTVAS 276
++++M ++ ++ D+ ++ + ++LN+ L +L +HDA+ S P AS
Sbjct: 276 RSNQKKLMQMLTSTGDDELLGRGLDLNDSLQILLAKHDAIASGSPLPVQAS 326
>AT5G16880.1 | chr5:5549658-5551274 FORWARD LENGTH=408
Length = 407
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 122/269 (45%), Gaps = 14/269 (5%)
Query: 5 MVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVMLLEM 64
+V+ AT+E L+E DW N+EIC+++ Q+ + ++I+ IKK + + Q A++LLE
Sbjct: 51 IVEDATTENLEEPDWDMNLEICDMINQETINSVELIRGIKKRIMMKQPRIQYLALVLLET 110
Query: 65 LMNNCGEPIHKQVIDNGXXXXXXXXXXXXTELPVREKIFLLLDATQTSLGGVKGKFPQYY 124
+ NC + + + T + R K +L++A S ++ P +
Sbjct: 111 CVKNCEKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTSELR-YLPVFE 169
Query: 125 GAYYELVSAGVQFSNRXXXXXXXXXXXXXXXXXXIEPN-NNSLSRRLDEGQKEVHAQPVS 183
Y L + G++F R P N L + + E + PV
Sbjct: 170 ETYKSLKARGIRFPGRDNESLAPIFTPARSTPA---PELNADLPQHVHEPAHIQYDVPVR 226
Query: 184 ESSIIRK------ASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVM 237
+ + A + +E+L VL S P+H + D+ LV+QC + + ++
Sbjct: 227 SFTAEQTKEAFDIARNSIELLSTVLSS-SPQH-DALQDDLTTTLVQQCRQSQTTVQRIIE 284
Query: 238 TS-RDEVVVSQAIELNEELHKVLVRHDAL 265
T+ +E ++ +A+ +N+EL K L +++ +
Sbjct: 285 TAGENEALLFEALNVNDELVKTLSKYEEM 313
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.131 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,252,264
Number of extensions: 276887
Number of successful extensions: 666
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 659
Number of HSP's successfully gapped: 11
Length of query: 401
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 300
Effective length of database: 8,337,553
Effective search space: 2501265900
Effective search space used: 2501265900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)