BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0101700 Os08g0101700|AK061172
         (238 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25570.1  | chr4:13053887-13055518 REVERSE LENGTH=240          145   1e-35
AT5G38630.1  | chr5:15466141-15467511 FORWARD LENGTH=231          129   1e-30
AT1G14730.1  | chr1:5073244-5074568 FORWARD LENGTH=225             79   2e-15
AT1G26100.1  | chr1:9022716-9024081 REVERSE LENGTH=237             77   1e-14

>AT4G25570.1 | chr4:13053887-13055518 REVERSE LENGTH=240
          Length = 239

 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 94/178 (52%), Gaps = 5/178 (2%)

Query: 35  WCVHFRGGLALRSHNKQLIFNTHPXXXXXXXXXXAAEAILSYRSLSIIVSSRDARKKXXX 94
           W + +RGGLA  + NK LIFN HP            EAI+SY+SL +    +  +K    
Sbjct: 28  WSISYRGGLAWEATNKNLIFNLHPVLMLIGFIILGGEAIISYKSLPL---EKPVKKLIHL 84

Query: 95  XXXXXXXXXXXXXIYAVFKYHAEADIPNLYSLHSWIGIATISLYALHWLLAFLTFFFPGA 154
                        I A FK H E+ IPNLYSLHSWIGI  ISLY   W+ +F+ FFFPG 
Sbjct: 85  ILHAIALALGIFGICAAFKNHNESHIPNLYSLHSWIGIGVISLYGFQWVYSFIVFFFPGG 144

Query: 155 SHDTRRSAVPWHXXXXXXXXXXXXXXXQLGFLEKLTFLQAPPLRLSRYGAEALLVNFT 212
           S + +   +PWH                LGFLEKLTFL+     L +YG+EA L+NFT
Sbjct: 145 STNLKSGLLPWHAMLGLFVYILAVGNAALGFLEKLTFLENG--GLDKYGSEAFLINFT 200



>AT5G38630.1 | chr5:15466141-15467511 FORWARD LENGTH=231
          Length = 230

 Score =  129 bits (325), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 35  WCVHFRGGLALRSHNKQLIFNTHPXXXXXXXXXXAAEAILSYRSLSIIVSSRDARKKXXX 94
           W VH+RGGLAL S NK  IFN HP            EA+L+Y+S+     +++ +K    
Sbjct: 29  WTVHYRGGLALSSDNKDHIFNVHPVMMVIGLILFNGEAMLAYKSVQ---GTKNLKKLVHL 85

Query: 95  XXXXXXXXXXXXXIYAVFKYHAEADIPNLYSLHSWIGIATISLYALHWLLAFLTFFFPGA 154
                        ++A  K+H +  I N YSLHSW+G+A + L+A  W   F+T+++PG 
Sbjct: 86  TLQLTAFILSLIGVWAALKFHIDKGIENFYSLHSWLGLACLFLFAFQWAAGFVTYWYPGG 145

Query: 155 SHDTRRSAVPWHXXXXXXXXXXXXXXXQLGFLEKLTFLQAPPLRLSRYGAEALLVN 210
           S ++R S +PWH                 G LEK+TFLQ   + ++RY  EA+LVN
Sbjct: 146 SRNSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVNQV-ITRYSTEAMLVN 200



>AT1G14730.1 | chr1:5073244-5074568 FORWARD LENGTH=225
          Length = 224

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 9/177 (5%)

Query: 35  WCVHFRGGLALRSHNKQLIFNTHPXXXXXXXXXXAAEAILSYRSLSIIVSSRDARKKXXX 94
           W +H+R G+   S N   + N HP            +A+++Y++     +S   +K    
Sbjct: 35  WLLHYREGIEYGSDNPLKVLNVHPFLMYCGFLFLVGQAMMTYKT---AYASHQVQKMVHG 91

Query: 95  XXXXXXXXXXXXXIYAVFKYHAEADIPNLYSLHSWIGIATISLYALHWLLAFLTFFFPGA 154
                        I A F++H + ++ ++ SLHSWIG+ T  L  + WL    TF  P +
Sbjct: 92  GLHLIGLVLGIVGICAAFRFHDKVNLKDMVSLHSWIGLTTFILLGVQWLFGAFTFLAPQS 151

Query: 155 SHDTRRSAVPWHXXXXXXXXXXXXXXXQLGFLEKLTFLQAPPLRLSRYGAEALLVNF 211
           S  TR   +PWH                 G +++ T L           AE+ L+NF
Sbjct: 152 SSGTRTRMMPWHVLGGRALLYMGIVAALTGLMQRATMLGQST------NAESRLINF 202



>AT1G26100.1 | chr1:9022716-9024081 REVERSE LENGTH=237
          Length = 236

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 6/163 (3%)

Query: 49  NKQLIFNT-HPXXXXXXXXXXAAEAILSYRSLSIIVSSRDARKKXXXXXXXXXXXXXXXX 107
           N  L ++T HP          + EAIL +R L     SR  +K                 
Sbjct: 35  NLGLSYSTLHPLLMVIGFILVSGEAILIHRWLP---GSRKTKKAVHLWLQGMALASAVFG 91

Query: 108 IYAVFKYHAEADIPNLYSLHSWIGIATISLYALHWLLAFLTFFFPGASHDTRRSAVPWHX 167
           I+  F Y       N YSLHSW+G+ ++SL+A  W+  F++F+  G    TR + +PWH 
Sbjct: 92  IWTKFHYQ-RGVFANFYSLHSWMGLLSVSLFAAQWVTGFMSFWHRGEVRTTRTTFLPWHV 150

Query: 168 XXXXXXXXXXXXXXQLGFLEKLTFLQAPPLRLSRYGAEALLVN 210
                         + G LEKLTFLQ     + R G+E++ VN
Sbjct: 151 FLGLYTYGLAIATAETGLLEKLTFLQTKR-NVPRRGSESMTVN 192



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.327    0.136    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,861,497
Number of extensions: 72480
Number of successful extensions: 166
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 158
Number of HSP's successfully gapped: 4
Length of query: 238
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 142
Effective length of database: 8,474,633
Effective search space: 1203397886
Effective search space used: 1203397886
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 110 (47.0 bits)