BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0676200 Os07g0676200|AK100834
         (74 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G04140.2  | chr5:1130031-1138186 FORWARD LENGTH=1649            87   1e-18
AT2G41220.1  | chr2:17177934-17188388 FORWARD LENGTH=1630          84   1e-17
AT5G53460.1  | chr5:21700518-21709629 FORWARD LENGTH=2209          53   4e-08

>AT5G04140.2 | chr5:1130031-1138186 FORWARD LENGTH=1649
          Length = 1648

 Score = 87.4 bits (215), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/72 (61%), Positives = 51/72 (70%), Gaps = 11/72 (15%)

Query: 3    YDGGTGARPISLIKHSAGPWELGLSEAHQ----DG-------RVDGGFRSCQYVLMASVM 51
            +DGGTGA PIS IKH+ GPWELGL+E HQ    +G       RVDGG +S   VLMA+ M
Sbjct: 1187 HDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGLKSGVDVLMAAAM 1246

Query: 52   GVDEYGFGSVAM 63
            G DEYGFGS+AM
Sbjct: 1247 GADEYGFGSLAM 1258



>AT2G41220.1 | chr2:17177934-17188388 FORWARD LENGTH=1630
          Length = 1629

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 11/72 (15%)

Query: 3    YDGGTGARPISLIKHSAGPWELGLSEAHQ----DG-------RVDGGFRSCQYVLMASVM 51
            YDGGTGA PIS IKH+ GPWELGL+E  +    +G       RVDGGF+S   VL+A+ M
Sbjct: 1163 YDGGTGASPISSIKHAGGPWELGLAETQKTLIGNGLRERVIIRVDGGFKSGVDVLIAAAM 1222

Query: 52   GVDEYGFGSVAM 63
            G DEYGFG++AM
Sbjct: 1223 GADEYGFGTLAM 1234



>AT5G53460.1 | chr5:21700518-21709629 FORWARD LENGTH=2209
          Length = 2208

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 11/74 (14%)

Query: 1    ADYDGGTGARPISLIKHSAGPWELGLSEAHQD-------GR----VDGGFRSCQYVLMAS 49
            A +DGGTGA   + IK++  PWELGL+E HQ        GR     DG  ++ + V +A+
Sbjct: 1186 AGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAVAA 1245

Query: 50   VMGVDEYGFGSVAM 63
            ++G +E+GF +  +
Sbjct: 1246 LLGAEEFGFSTAPL 1259



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.137    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,810,238
Number of extensions: 63285
Number of successful extensions: 104
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 3
Length of query: 74
Length of database: 11,106,569
Length adjustment: 46
Effective length of query: 28
Effective length of database: 9,845,433
Effective search space: 275672124
Effective search space used: 275672124
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 104 (44.7 bits)