BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0673500 Os07g0673500|AK106176
(296 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09140.1 | chr1:2942887-2945818 REVERSE LENGTH=269 259 9e-70
AT1G02840.1 | chr1:626918-629583 FORWARD LENGTH=304 259 1e-69
AT3G49430.1 | chr3:18332668-18334829 FORWARD LENGTH=301 251 4e-67
AT4G02430.2 | chr4:1069186-1071313 FORWARD LENGTH=279 242 1e-64
AT3G53500.2 | chr3:19834557-19836507 REVERSE LENGTH=285 67 1e-11
AT2G37340.1 | chr2:15670372-15672331 REVERSE LENGTH=291 67 1e-11
AT4G31580.1 | chr4:15306983-15308064 FORWARD LENGTH=201 64 7e-11
AT4G25500.1 | chr4:13025168-13027243 FORWARD LENGTH=351 63 2e-10
AT5G52040.2 | chr5:21131081-21133318 FORWARD LENGTH=358 62 3e-10
AT2G24590.1 | chr2:10449837-10450860 FORWARD LENGTH=197 61 6e-10
AT3G61860.1 | chr3:22900311-22902159 REVERSE LENGTH=265 60 1e-09
AT2G46610.1 | chr2:19136769-19138492 REVERSE LENGTH=251 60 2e-09
AT1G23860.1 | chr1:8428091-8429164 REVERSE LENGTH=188 57 9e-09
AT4G12640.1 | chr4:7462697-7467630 FORWARD LENGTH=824 55 5e-08
AT4G24770.1 | chr4:12766223-12767952 REVERSE LENGTH=330 52 4e-07
AT5G50250.1 | chr5:20452677-20453965 REVERSE LENGTH=290 52 5e-07
AT5G12190.1 | chr5:3940731-3941105 REVERSE LENGTH=125 50 1e-06
AT1G60650.1 | chr1:22340089-22342148 FORWARD LENGTH=293 49 4e-06
>AT1G09140.1 | chr1:2942887-2945818 REVERSE LENGTH=269
Length = 268
Score = 259 bits (663), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 130/186 (69%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
Query: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
MS RW+RTIYVGNLPGDIR+ EVEDLFYKYG IVDIDLKIPPRPPG+AFVEFEDPRDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGNRLRVELAH-XXXXXXXXXXXXXXXXXXXXXXXHTEYRVLVTGLPSSA 119
AI GRDGY+FDG RLRVE+AH ++YRVLVTGLP SA
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120
Query: 120 SWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYI 179
SWQDLKDHMR AGDVC+SEV+ + G G+VDY+NYDDMKYAIRKLD +EF+NAFS AYI
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180
Query: 180 RVKEYD 185
RV+EY+
Sbjct: 181 RVREYE 186
>AT1G02840.1 | chr1:626918-629583 FORWARD LENGTH=304
Length = 303
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 146/196 (74%), Gaps = 11/196 (5%)
Query: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
MS R SRT+YVGNLPGDIREREVEDLF KYG +V IDLK+PPRPPG+AFVEF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGNRLRVELAHXXXXXX-----------XXXXXXXXXXXXXXXXXHTEYR 109
AI GRDGY+FDG+RLRVELAH +E+R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 110 VLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSE 169
VLVTGLPSSASWQDLKDHMR GDVC+S+VYR+ GT G+VDYT Y+DMKYA++KLDD+E
Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180
Query: 170 FKNAFSKAYIRVKEYD 185
F+NAFS Y+RV+EYD
Sbjct: 181 FRNAFSNGYVRVREYD 196
>AT3G49430.1 | chr3:18332668-18334829 FORWARD LENGTH=301
Length = 300
Score = 251 bits (640), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 146/199 (73%), Gaps = 14/199 (7%)
Query: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
MS R+SR+IYVGNLPGDIRE E+ED+FYKYGRIVDI+LK+PPRPP + FVEFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGNRLRVELAHXXXXXXXXXXXXXXXXXXXX--------------XXXHT 106
AI+GRDGYN DG RLRVELAH H+
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 107 EYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLD 166
E+RV+V GLPSSASWQDLKDHMR AGDVC++EV R+ GT G+VDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 167 DSEFKNAFSKAYIRVKEYD 185
D+EF+N +++ +IRVK+Y+
Sbjct: 181 DTEFRNPWARGFIRVKKYE 199
>AT4G02430.2 | chr4:1069186-1071313 FORWARD LENGTH=279
Length = 278
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 144/197 (73%), Gaps = 15/197 (7%)
Query: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
MS R SRTIYVGNLPGDIREREVEDLF KYG +V IDLKIPPRPPG+AFVEFED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGNRLRVELAHXXXXXXXXXXXXXXXXXXXXX------------XXHTEY 108
AI GRDGY+FDG+ LRVELAH +EY
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 109 RVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDS 168
RV+V+GLPSSASWQDLKDHMR G+VC+S+V+R+G GT GIVDYT+Y+DMKYA LDD+
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDDT 177
Query: 169 EFKNAFSKAYIRVKEYD 185
EF+NAFS Y+RV+EYD
Sbjct: 178 EFRNAFSHEYVRVREYD 194
>AT3G53500.2 | chr3:19834557-19836507 REVERSE LENGTH=285
Length = 284
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
+YVG L R R++E LF +YGR+ D+D+K +AFVEF DPRDA+DA DG
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR-----DYAFVEFSDPRDADDARYYLDGR 67
Query: 69 NFDGNRLRVELAH 81
+FDG+R+ VE +
Sbjct: 68 DFDGSRITVEASR 80
>AT2G37340.1 | chr2:15670372-15672331 REVERSE LENGTH=291
Length = 290
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
+YVG L R R++E LF +YGR+ D+D+K +AFVEF DPRDA+DA DG
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR-----DYAFVEFGDPRDADDARHYLDGR 67
Query: 69 NFDGNRLRVELAH 81
+FDG+R+ VE +
Sbjct: 68 DFDGSRITVEFSR 80
>AT4G31580.1 | chr4:15306983-15308064 FORWARD LENGTH=201
Length = 200
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
+YVGNL + ERE+ED F +G + + + RPPG+AF++FEDPRDA DAIR DG
Sbjct: 4 VYVGNLDPRVTERELEDEFRAFGVVRSV--WVARRPPGYAFLDFEDPRDARDAIRALDGK 61
Query: 69 NFDGNRLRVELAH 81
N RVE +H
Sbjct: 62 NG----WRVEQSH 70
>AT4G25500.1 | chr4:13025168-13027243 FORWARD LENGTH=351
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRD 66
+ ++ GN D RE ++E LF KYG++ +D+K GFAFV ED RDAEDAIR D
Sbjct: 2 KPVFCGNFEYDAREGDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56
Query: 67 GYNF--DGNRLRVE 78
+ F G RLRVE
Sbjct: 57 RFEFGRKGRRLRVE 70
>AT5G52040.2 | chr5:21131081-21133318 FORWARD LENGTH=358
Length = 357
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRD 66
+ ++ GN D RE ++E LF KYG++ +D+K GFAFV ED RDAEDAIR D
Sbjct: 2 KPVFCGNFEYDARESDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56
Query: 67 GYNF--DGNRLRVE 78
+ + G RLRVE
Sbjct: 57 RFEYGRTGRRLRVE 70
>AT2G24590.1 | chr2:10449837-10450860 FORWARD LENGTH=197
Length = 196
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
+YVGNL + ERE+ED F +G I + + RPPG+AF++FED RDA DAIR DG
Sbjct: 4 VYVGNLDPRVTERELEDEFRSFGVIRSV--WVARRPPGYAFLDFEDSRDARDAIREVDGK 61
Query: 69 NFDGNRLRVELAH 81
N RVE +H
Sbjct: 62 NG----WRVEQSH 70
>AT3G61860.1 | chr3:22900311-22902159 REVERSE LENGTH=265
Length = 264
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRD 66
R ++VGN + R+ ++E LF KYGR+ +D+K G+AFV FED RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYNF--DGNRLRVELA 80
+ F + RL VE A
Sbjct: 57 NFPFGYEKRRLSVEWA 72
>AT2G46610.1 | chr2:19136769-19138492 REVERSE LENGTH=251
Length = 250
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRD 66
R +YVGN D R ++E LF K+GR+ +D+K G+AFV FED RDAEDAIR D
Sbjct: 2 RHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMK-----SGYAFVYFEDERDAEDAIRRTD 56
Query: 67 GYNFDGNRLRVEL 79
F R ++ +
Sbjct: 57 NTTFGYGRRKLSV 69
>AT1G23860.1 | chr1:8428091-8429164 REVERSE LENGTH=188
Length = 187
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
+YVGNL + ERE+ED F +G + ++ + RPPG+AF+EF+D RDA DAI D
Sbjct: 4 VYVGNLDPRVTERELEDEFKAFGVLRNV--WVARRPPGYAFLEFDDERDALDAISALD-- 59
Query: 69 NFDGNRLRVELAH 81
N RVEL+H
Sbjct: 60 --RKNGWRVELSH 70
>AT4G12640.1 | chr4:7462697-7467630 FORWARD LENGTH=824
Length = 823
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPG--FAFVEFEDPRDAEDAIR 63
SR ++VGNLP I ERE+ D F ++G + + + PG +AFV F DA AI
Sbjct: 22 SRHLWVGNLPHGILERELADRFLRFGELESLAFQ-----PGRSYAFVNFNHDEDAFAAIE 76
Query: 64 GRDGYNFDGNRLRVELA 80
G+ GN LR+E A
Sbjct: 77 SLQGFPLSGNPLRIEFA 93
>AT4G24770.1 | chr4:12766223-12767952 REVERSE LENGTH=330
Length = 329
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDL---KIPPRPPGFAFVEFEDPRDAEDAIRGR 65
+YVGNLP D+ +E LF ++G++V+ + + R GF FV D + +AI
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 66 DGYNFDGNRLRVELAH 81
DG N +G +RV +A
Sbjct: 306 DGQNLEGRAIRVNVAE 321
>AT5G50250.1 | chr5:20452677-20453965 REVERSE LENGTH=290
Length = 289
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVD---IDLKIPPRPPGFAFVEFEDPRDAEDAIRGR 65
IYVGNLP D+ +E LF ++G++VD + + R GF FV+ + + AI
Sbjct: 209 IYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAAL 268
Query: 66 DGYNFDGNRLRVELAH 81
DG N +G ++V +A
Sbjct: 269 DGQNLEGRAIKVNVAE 284
>AT5G12190.1 | chr5:3940731-3941105 REVERSE LENGTH=125
Length = 124
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGR 65
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA++A+
Sbjct: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKATKGTAFVVYEDIYDAKNAVDHL 77
Query: 66 DGYNFDGNRLRVEL 79
G+N NR + L
Sbjct: 78 SGFNV-ANRYLIVL 90
>AT1G60650.1 | chr1:22340089-22342148 FORWARD LENGTH=293
Length = 292
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKI---PPRPPGFAFVEFEDPRDAEDAIR 63
I+VG L D+ ER++E F +YG+I + + + RP GF F+ F D R A+DAI+
Sbjct: 14 IFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,420,088
Number of extensions: 168696
Number of successful extensions: 710
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 773
Number of HSP's successfully gapped: 24
Length of query: 296
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 198
Effective length of database: 8,419,801
Effective search space: 1667120598
Effective search space used: 1667120598
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)