BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0673200 Os07g0673200|AK065454
         (321 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02860.1  | chr1:635474-637083 FORWARD LENGTH=336              375   e-104
AT2G38920.1  | chr2:16248420-16250585 REVERSE LENGTH=336          221   3e-58
AT4G03510.1  | chr4:1557905-1558654 REVERSE LENGTH=250             50   1e-06

>AT1G02860.1 | chr1:635474-637083 FORWARD LENGTH=336
          Length = 335

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/335 (56%), Positives = 227/335 (67%), Gaps = 14/335 (4%)

Query: 1   MKFAKKYEKYMKGMDEE--LPGVGXXXXXXXXXXCRSDLQSHENDGSSA--GRCPGHCSV 56
           MKF KKYE+YM+G  E+  LPGVG          CR +        + A    C   C V
Sbjct: 1   MKFCKKYEEYMQGQKEKKNLPGVGFKKLKKILKRCRRNHVPSRISFTDAINHNCSRECPV 60

Query: 57  CDGSFFPSLLNEMSAVIGCFNXXXXXXXXXXXXSGFKKYTMWFTSKGHK-SHGALIQQGK 115
           CDG+FFP LL EM  V+G FN            SGF K   W      K  H  LIQ+GK
Sbjct: 61  CDGTFFPELLKEMEDVVGWFNEHAQKLLELHLASGFTKCLTWLRGNSRKKDHHGLIQEGK 120

Query: 116 DLVTYAIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHIEILQSPWLCELMAFYMNLR 175
           DLV YA+INAVA+RKILKKYDKIH S+QGQ FK Q Q + IEILQSPWLCELMAF++NL+
Sbjct: 121 DLVNYALINAVAIRKILKKYDKIHESRQGQAFKTQVQKMRIEILQSPWLCELMAFHINLK 180

Query: 176 RSKKNNGAM---------ELFGDCSLVFDDDKPTISCNLFDSMRVDISLTCSICLDTVFD 226
            SKK +GA           LF  C+L FDD KP +SC L DS++VDI LTCSICLDTVFD
Sbjct: 181 ESKKESGATITSPPPPVHALFDGCALTFDDGKPLLSCELSDSVKVDIDLTCSICLDTVFD 240

Query: 227 PVALSCGHIYCYLCSCSAASVTIVDGLKSAERKSKCPLCRQAGVFPNAVHLDELNMLLSY 286
           P++L+CGHIYCY+C+CSAASV +VDGLK+AE   KCPLCR+ GV+  AVHLDELN+LL  
Sbjct: 241 PISLTCGHIYCYMCACSAASVNVVDGLKTAEATEKCPLCREDGVYKGAVHLDELNILLKR 300

Query: 287 SCPEYWEKRIQMERVERVRLAKEHWESQCRAFLGM 321
           SC +YWE+R + ER ER++ AKE+W+ QCR+F G+
Sbjct: 301 SCRDYWEERRKTERAERLQQAKEYWDYQCRSFTGI 335



>AT2G38920.1 | chr2:16248420-16250585 REVERSE LENGTH=336
          Length = 335

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 109/267 (40%), Positives = 159/267 (59%)

Query: 54  CSVCDGSFFPSLLNEMSAVIGCFNXXXXXXXXXXXXSGFKKYTMWFTSKGHKSHGALIQQ 113
           C  CD  FF  L+ E + + G F             +G ++Y +           AL+Q+
Sbjct: 68  CPWCDQMFFEELMKEATDIAGFFRSRVRHLLHLHVATGMQRYMIRLRRCFTDEKQALVQE 127

Query: 114 GKDLVTYAIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHIEILQSPWLCELMAFYMN 173
           G+ L+ Y  +NA+A+RKILKKYDK+H S+ G+ FK + ++  IE+L SPWL EL AFY+N
Sbjct: 128 GQILIQYITMNAIAIRKILKKYDKVHSSENGKNFKLKMRAERIELLHSPWLIELGAFYLN 187

Query: 174 LRRSKKNNGAMELFGDCSLVFDDDKPTISCNLFDSMRVDISLTCSICLDTVFDPVALSCG 233
                  N             ++D+P +   L +S+ ++  LTC+ICL+TVF+P AL CG
Sbjct: 188 SGLDNVGNFKNSFGRVACENLNEDQPVLKLMLPNSIELEYDLTCAICLETVFNPYALKCG 247

Query: 234 HIYCYLCSCSAASVTIVDGLKSAERKSKCPLCRQAGVFPNAVHLDELNMLLSYSCPEYWE 293
           HI+C  C+CSAASV I  G+K+A R SKCP+CR+AGV+  AVH+ EL++LL     EYW+
Sbjct: 248 HIFCNSCACSAASVLIFQGIKAAPRHSKCPICREAGVYAEAVHMIELHLLLKTRSKEYWK 307

Query: 294 KRIQMERVERVRLAKEHWESQCRAFLG 320
           +R+  ER E V+ +K  W  Q +  +G
Sbjct: 308 ERMMNERSEMVKQSKMFWNEQTKHMIG 334



>AT4G03510.1 | chr4:1557905-1558654 REVERSE LENGTH=250
          Length = 249

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 185 ELFGDCSLVFDDDKP-TISCNLFDSMRVDISLTCSICLDTVFDPVALSCGHIYCYLCSCS 243
           EL+G+ +  F   KP  I+ ++      D +  C+ICLD+V +PV   CGH++C+ C   
Sbjct: 15  ELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHK 74

Query: 244 AASVTIVDGLKSAERKSKCPLCR 266
              V         +R  +CP+C+
Sbjct: 75  WLDVQSFSTSDEYQRHRQCPVCK 97



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.323    0.135    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,773,725
Number of extensions: 261728
Number of successful extensions: 746
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 750
Number of HSP's successfully gapped: 4
Length of query: 321
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 222
Effective length of database: 8,392,385
Effective search space: 1863109470
Effective search space used: 1863109470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)