BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0664600 Os07g0664600|AK109386
(209 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26760.1 | chr3:9843639-9844899 FORWARD LENGTH=301 124 3e-29
AT3G26770.1 | chr3:9845494-9847079 FORWARD LENGTH=307 120 5e-28
AT4G03140.1 | chr4:1392191-1393662 FORWARD LENGTH=344 114 3e-26
AT3G29260.1 | chr3:11215952-11216834 REVERSE LENGTH=260 109 8e-25
AT3G29250.1 | chr3:11193767-11194948 REVERSE LENGTH=299 108 3e-24
AT2G47130.1 | chr2:19349627-19350481 REVERSE LENGTH=258 107 5e-24
AT2G47140.1 | chr2:19350970-19352059 REVERSE LENGTH=258 103 9e-23
AT2G47120.1 | chr2:19347359-19348223 REVERSE LENGTH=259 101 2e-22
AT3G51680.1 | chr3:19173622-19174667 REVERSE LENGTH=304 92 2e-19
AT3G42960.1 | chr3:15018735-15019656 REVERSE LENGTH=273 80 1e-15
AT1G52340.1 | chr1:19489997-19491527 REVERSE LENGTH=286 74 5e-14
AT1G24360.1 | chr1:8640820-8643283 FORWARD LENGTH=320 48 4e-06
>AT3G26760.1 | chr3:9843639-9844899 FORWARD LENGTH=301
Length = 300
Score = 124 bits (311), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCXXXXXXX 103
VAVITG ASGIG+ATA+EFV GA+VI+ DI ++ G VA ELG+ AA + C
Sbjct: 40 VAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGS-AAHFLRCDVTEEEQ 98
Query: 104 XXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACLKHAA 163
RHG+LDV+ ++ YD+VM +N R V +KHAA
Sbjct: 99 IAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRGTVLGIKHAA 158
Query: 164 RVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQTV 206
R M P +G ILC +S + ++G +GP AYS+SK + G+V+TV
Sbjct: 159 RAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTV 201
>AT3G26770.1 | chr3:9845494-9847079 FORWARD LENGTH=307
Length = 306
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCXXXXXXX 103
VA+ITG ASG+G+ATA EF+R+GA+V++AD+ + G A ELG++A + C
Sbjct: 45 VALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEA-EFVRCDVTVEAD 103
Query: 104 XXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACLKHAA 163
R+G+LDV+Y+N ++RVM +N +V+ +KHAA
Sbjct: 104 IAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSGIKHAA 163
Query: 164 RVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
+ M P R+GCILCT+S V G + P +Y++SK G+V++
Sbjct: 164 KFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKS 205
>AT4G03140.1 | chr4:1392191-1393662 FORWARD LENGTH=344
Length = 343
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCXXXXXXX 103
VA+ITG ASGIG+ATA +F+ +GAKVI+ADIQ +GR ELG A Y C
Sbjct: 82 VALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCA-YFPCDVTKESD 140
Query: 104 XXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACLKHAA 163
H +LD++Y+N +D+V+ N R ++A +KHAA
Sbjct: 141 IANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNV-FDKVINTNVRGVMAGIKHAA 199
Query: 164 RVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
RVM PR +G I+C S T ++G + YS+SK+AV+G+V++
Sbjct: 200 RVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRS 241
>AT3G29260.1 | chr3:11215952-11216834 REVERSE LENGTH=260
Length = 259
Score = 109 bits (273), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 3/163 (1%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCXXXXXXX 103
+ +ITG ASGIG A+ F +GAKV++ D+Q++LG+ VA +G D AS+ C
Sbjct: 10 IVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDITDETE 69
Query: 104 XXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACLKHAA 163
+HG+LDV++SN +DR MAVN R A +KHAA
Sbjct: 70 VENAVKFTVEKHGKLDVLFSN--AGVMEPHGSILDLDLEAFDRTMAVNVRGAAAFIKHAA 127
Query: 164 RVM-APRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
R M A G I+CT S TA +G GP +Y+ SK A++G+V++
Sbjct: 128 RSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRS 170
>AT3G29250.1 | chr3:11193767-11194948 REVERSE LENGTH=299
Length = 298
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCXXXXXXX 103
+A+ITG ASGIG + F +GAKV++ DIQ++LG+ +A +G D AS+ C
Sbjct: 48 IAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVTDETD 107
Query: 104 XXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACLKHAA 163
+HG+LDV++SN +DR MAVN R A +KHAA
Sbjct: 108 VENAVKFTVEKHGKLDVLFSN--AGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKHAA 165
Query: 164 RVM-APRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
R M A G I+CT S A +G GP +Y+ SK A++G++++
Sbjct: 166 RSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRS 208
>AT2G47130.1 | chr2:19349627-19350481 REVERSE LENGTH=258
Length = 257
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 88/163 (53%), Gaps = 3/163 (1%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCXXXXXXX 103
+A+ITG ASGIG + F +GAKV++ D Q++LG+ VA +G D AS+ C
Sbjct: 10 IAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDVTNEKE 69
Query: 104 XXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACLKHAA 163
++G+LDV++SN +DR MAVN R A +KHAA
Sbjct: 70 VENAVKFTVEKYGKLDVLFSN--AGVMEQPGSFLDLNLEQFDRTMAVNVRGAAAFIKHAA 127
Query: 164 RVMAPRRA-GCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
R M + G I+CT S + +G GP AY+ SK A++G+V++
Sbjct: 128 RAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKS 170
>AT2G47140.1 | chr2:19350970-19352059 REVERSE LENGTH=258
Length = 257
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCXXXXXXX 103
+ +ITG ASGIG + + F +GA+V++ D+QD+LG+ VA +G D ASY HC
Sbjct: 10 IVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDVTNETE 69
Query: 104 XXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACLKHAA 163
++G+LDV++SN DR +A+N R A +KHAA
Sbjct: 70 VENAVKFTVEKYGKLDVLFSN--AGVIEPFVSILDLNLNELDRTIAINLRGTAAFIKHAA 127
Query: 164 RVMAPRRA-GCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
R M + G I+CT S A + P Y+ SK ++G++++
Sbjct: 128 RAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKS 170
>AT2G47120.1 | chr2:19347359-19348223 REVERSE LENGTH=259
Length = 258
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 4/163 (2%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCXXXXXXX 103
+ +ITG ASGIG A+ F +GAKV++ D+Q++LG+ VA +G D AS+ C
Sbjct: 10 IVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDVTNETE 69
Query: 104 XXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACLKHAA 163
+HG+LDV++SN +DR+MAVN R A +KHAA
Sbjct: 70 VEDAVKFTVEKHGKLDVLFSN--AGVLEPLESFLDFDLERFDRIMAVNVRGAAAFIKHAA 127
Query: 164 RVMAPRRA-GCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
R M + G I+CT S +A +G G Y+ SK +VG++++
Sbjct: 128 RAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRS 169
>AT3G51680.1 | chr3:19173622-19174667 REVERSE LENGTH=304
Length = 303
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAAS----YTHCXXX 99
VA+ITG A GIG+AT F R+GA V++AD+ + G ++A L + S + C
Sbjct: 36 VAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFISCDVS 95
Query: 100 XXXXXXXXXXXXXXRHGRLDVVYSNX-XXXXXXXXXXXXXXXXXXYDRVMAVNARSMVAC 158
R+GRLD++++N +D VM VN R +
Sbjct: 96 VEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVRGVGLG 155
Query: 159 LKHAARVMAPR-RAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
+KH AR M R GCI+ TAS V+G +GP AY+ SK A+VG+ +
Sbjct: 156 MKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKN 203
>AT3G42960.1 | chr3:15018735-15019656 REVERSE LENGTH=273
Length = 272
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCXXXXXXX 103
VA+ITG A GIG ATA+ F NGA VI+ADI ++ G VA +G Y HC
Sbjct: 12 VAIITGGARGIGAATARLFTENGAYVIVADILENEGILVAESIG---GCYVHCDVSKEAD 68
Query: 104 XXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACLKHAA 163
R GRLDV+++N +++++VN ++ +KHAA
Sbjct: 69 VEAAVELAMRRKGRLDVMFNNAGMSLNEGSIMGMDVDMV--NKLVSVNVNGVLHGIKHAA 126
Query: 164 RVMAP-RRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
+ M R G I+CT+SS+ ++G +G AY++SK A+ G+V+T
Sbjct: 127 KAMIKGGRGGSIICTSSSSGLMGGLGGHAYTLSKGAINGVVRT 169
>AT1G52340.1 | chr1:19489997-19491527 REVERSE LENGTH=286
Length = 285
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGEL----GADAASYTHCXXX 99
VA+ITG A+GIGE+ + F ++GAKV + D+QDDLG V L + A + H
Sbjct: 22 VALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVR 81
Query: 100 XXXXXXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAVNARSMVACL 159
G LD++ +N ++ VN + +
Sbjct: 82 VEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSE-FEMTFDVNVKGAFLSM 140
Query: 160 KHAARVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQTV 206
KHAARVM P + G I+ S V+G +GP +Y SK AV+G+ ++V
Sbjct: 141 KHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSV 187
>AT1G24360.1 | chr1:8640820-8643283 FORWARD LENGTH=320
Length = 319
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 26/175 (14%)
Query: 44 VAVITGAASGIGEATAKEFVRNGAKVIL-------------ADIQDDLGRAVAGELGADA 90
V VITGA+ GIG+A A + G KV++ I++ G+A+ G D
Sbjct: 78 VVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEEYGGQAIT--FGGDV 135
Query: 91 ASYTHCXXXXXXXXXXXXXXXXXRHGRLDVVYSNXXXXXXXXXXXXXXXXXXXYDRVMAV 150
+ T + G +DVV +N +D V+A+
Sbjct: 136 SKATDVDAMMKTALD--------KWGTIDVVVNNAGITRDTLLIRMKQSQ---WDEVIAL 184
Query: 151 NARSMVACLKHAARVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQT 205
N + C + A ++M ++ G I+ +S ++GNIG Y+ +K V+ +T
Sbjct: 185 NLTGVFLCTQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKT 239
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,341,551
Number of extensions: 53589
Number of successful extensions: 230
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 207
Number of HSP's successfully gapped: 12
Length of query: 209
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 115
Effective length of database: 8,529,465
Effective search space: 980888475
Effective search space used: 980888475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 109 (46.6 bits)