BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0664100 Os07g0664100|J100081D18
(128 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26760.1 | chr3:9843639-9844899 FORWARD LENGTH=301 97 3e-21
AT3G26770.1 | chr3:9845494-9847079 FORWARD LENGTH=307 94 1e-20
AT4G03140.1 | chr4:1392191-1393662 FORWARD LENGTH=344 90 2e-19
AT3G29260.1 | chr3:11215952-11216834 REVERSE LENGTH=260 80 2e-16
AT2G47120.1 | chr2:19347359-19348223 REVERSE LENGTH=259 79 6e-16
AT2G47140.1 | chr2:19350970-19352059 REVERSE LENGTH=258 78 1e-15
AT2G47130.1 | chr2:19349627-19350481 REVERSE LENGTH=258 76 4e-15
AT3G29250.1 | chr3:11193767-11194948 REVERSE LENGTH=299 76 5e-15
AT3G42960.1 | chr3:15018735-15019656 REVERSE LENGTH=273 71 1e-13
AT3G51680.1 | chr3:19173622-19174667 REVERSE LENGTH=304 71 1e-13
AT1G52340.1 | chr1:19489997-19491527 REVERSE LENGTH=286 64 2e-11
AT5G50690.1 | chr5:20621330-20622638 FORWARD LENGTH=300 55 1e-08
AT5G50590.1 | chr5:20587988-20589296 FORWARD LENGTH=300 55 1e-08
AT5G50770.1 | chr5:20646790-20648696 REVERSE LENGTH=343 47 3e-06
>AT3G26760.1 | chr3:9843639-9844899 FORWARD LENGTH=301
Length = 300
Score = 96.7 bits (239), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 60/94 (63%)
Query: 22 ASDSQRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAELGPDAAYT 81
++ S++L GKVAVITGGASGIGK TA EF+ GA+VII DI ++ GH VA ELG A +
Sbjct: 30 STSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFL 89
Query: 82 RCDXXXXXXXXXXXXXXXKRHGHLDVFHNNAGIA 115
RCD RHG LDV N+AGI+
Sbjct: 90 RCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGIS 123
>AT3G26770.1 | chr3:9845494-9847079 FORWARD LENGTH=307
Length = 306
Score = 94.4 bits (233), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%)
Query: 25 SQRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAELGPDAAYTRCD 84
S++L GKVA+ITGGASG+GK TA+EF+++GA+V+IAD+ + G A ELG +A + RCD
Sbjct: 38 SKKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAEFVRCD 97
Query: 85 XXXXXXXXXXXXXXXKRHGHLDVFHNNAGI 114
+R+G LDV +NNAGI
Sbjct: 98 VTVEADIAGAVEMTVERYGKLDVMYNNAGI 127
>AT4G03140.1 | chr4:1392191-1393662 FORWARD LENGTH=344
Length = 343
Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 54/89 (60%)
Query: 26 QRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAELGPDAAYTRCDX 85
++L GKVA+ITGGASGIGK TA +FI +GAKVIIADIQ +G ELGP AY CD
Sbjct: 76 RKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCAYFPCDV 135
Query: 86 XXXXXXXXXXXXXXKRHGHLDVFHNNAGI 114
H LD+ +NNAGI
Sbjct: 136 TKESDIANAVDFAVSLHTKLDIMYNNAGI 164
>AT3G29260.1 | chr3:11215952-11216834 REVERSE LENGTH=260
Length = 259
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 26 QRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAELGPD-AAYTRCD 84
QRL GK+ +ITGGASGIG A F +GAKV+I D+Q++LG +VA +G D A++ RCD
Sbjct: 4 QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCD 63
Query: 85 XXXXXXXXXXXXXXXKRHGHLDVFHNNAGI 114
++HG LDV +NAG+
Sbjct: 64 ITDETEVENAVKFTVEKHGKLDVLFSNAGV 93
>AT2G47120.1 | chr2:19347359-19348223 REVERSE LENGTH=259
Length = 258
Score = 79.0 bits (193), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 27 RLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAELGPD-AAYTRCDX 85
RL GK+ +ITGGASGIG A F +GAKV+I D+Q++LG +VA +G D A++ RCD
Sbjct: 5 RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64
Query: 86 XXXXXXXXXXXXXXKRHGHLDVFHNNAGI 114
++HG LDV +NAG+
Sbjct: 65 TNETEVEDAVKFTVEKHGKLDVLFSNAGV 93
>AT2G47140.1 | chr2:19350970-19352059 REVERSE LENGTH=258
Length = 257
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 26 QRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAELGPD-AAYTRCD 84
+RL GK+ +ITGGASGIG + F ++GA+V+I D+QD+LG +VA +G D A+Y CD
Sbjct: 4 KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCD 63
Query: 85 XXXXXXXXXXXXXXXKRHGHLDVFHNNAGI 114
+++G LDV +NAG+
Sbjct: 64 VTNETEVENAVKFTVEKYGKLDVLFSNAGV 93
>AT2G47130.1 | chr2:19349627-19350481 REVERSE LENGTH=258
Length = 257
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 27 RLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAELGPD-AAYTRCDX 85
RL GK+A+ITGGASGIG F +GAKV+I D Q++LG +VA +G D A++ RCD
Sbjct: 5 RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64
Query: 86 XXXXXXXXXXXXXXKRHGHLDVFHNNAGI 114
+++G LDV +NAG+
Sbjct: 65 TNEKEVENAVKFTVEKYGKLDVLFSNAGV 93
>AT3G29250.1 | chr3:11193767-11194948 REVERSE LENGTH=299
Length = 298
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 26 QRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAELGPD-AAYTRCD 84
Q L GK+A+ITGGASGIG F +GAKV+I DIQ++LG ++A +G D A++ RC+
Sbjct: 42 QVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCN 101
Query: 85 XXXXXXXXXXXXXXXKRHGHLDVFHNNAGI 114
++HG LDV +NAG+
Sbjct: 102 VTDETDVENAVKFTVEKHGKLDVLFSNAGV 131
>AT3G42960.1 | chr3:15018735-15019656 REVERSE LENGTH=273
Length = 272
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 22 ASDSQRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAELGPDAAYT 81
A+ +RL KVA+ITGGA GIG TA F +NGA VI+ADI ++ G VA +G Y
Sbjct: 2 ANSDKRLFEKVAIITGGARGIGAATARLFTENGAYVIVADILENEGILVAESIG--GCYV 59
Query: 82 RCDXXXXXXXXXXXXXXXKRHGHLDVFHNNAGIA 115
CD +R G LDV NNAG++
Sbjct: 60 HCDVSKEADVEAAVELAMRRKGRLDVMFNNAGMS 93
>AT3G51680.1 | chr3:19173622-19174667 REVERSE LENGTH=304
Length = 303
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 26 QRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAEL-----GPDAAY 80
+RL GKVA+ITGGA GIGK T F ++GA V+IAD+ + G S+A L P A+
Sbjct: 30 KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAF 89
Query: 81 TRCDXXXXXXXXXXXXXXXKRHGHLDVFHNNAGI 114
CD R+G LD+ NNAG+
Sbjct: 90 ISCDVSVEADVENLVNVTVARYGRLDILFNNAGV 123
>AT1G52340.1 | chr1:19489997-19491527 REVERSE LENGTH=286
Length = 285
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 26 QRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVAAEL-----GPDAAY 80
QRL GKVA+ITGGA+GIG+ F K+GAKV I D+QDDLG V L A +
Sbjct: 16 QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFF 75
Query: 81 TRCDXXXXXXXXXXXXXXXKRHGHLDVFHNNAGIA 115
D K G LD+ NNAG+
Sbjct: 76 IHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLC 110
>AT5G50690.1 | chr5:20621330-20622638 FORWARD LENGTH=300
Length = 299
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 18 FFSAASDSQRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVA---AEL 74
F +S+++ GKV +ITG +SGIG+ A E+ + GA + + ++D VA +L
Sbjct: 35 FIRGCKESEKVNGKVVIITGSSSGIGEHLAYEYARRGAYLTLVARREDRLQVVADRCRKL 94
Query: 75 G-PDAAYTRCDXXXXXXXXXXXXXXXKRHGHLDVFHNNAGIA 115
G PD A R D R G LD NNAGIA
Sbjct: 95 GSPDVAVVRGDVSVIKDCKRFVQETISRFGRLDHLVNNAGIA 136
>AT5G50590.1 | chr5:20587988-20589296 FORWARD LENGTH=300
Length = 299
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 18 FFSAASDSQRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQDDLGHSVA---AEL 74
F +S+++ GKV +ITG +SGIG+ A E+ + GA + + ++D VA +L
Sbjct: 35 FIRGCKESEKVNGKVVIITGSSSGIGEHLAYEYARRGAYLTLVARREDRLQVVADRCRKL 94
Query: 75 G-PDAAYTRCDXXXXXXXXXXXXXXXKRHGHLDVFHNNAGIA 115
G PD A R D R G LD NNAGIA
Sbjct: 95 GSPDVAVVRGDVSVIKDCKRFVQETISRFGRLDHLVNNAGIA 136
>AT5G50770.1 | chr5:20646790-20648696 REVERSE LENGTH=343
Length = 342
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 25 SQRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADIQ-DDLGHSVA-AEL--GPDAAY 80
S+ +AGKV VITG ASGIG+ A E+ K GA + + DI+ + L H A AEL P+
Sbjct: 42 SENVAGKVVVITGAASGIGEALAYEYGKRGAYLALVDIRGEPLFHVAALAELYGSPEVLP 101
Query: 81 TRCDXXXXXXXXXXXXXXXKRHGHLDVFHNNAGIA 115
D G LD NAG+A
Sbjct: 102 LVADVSKLQDCERFIRATVLHFGRLDHLVTNAGVA 136
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.132 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,990,009
Number of extensions: 62718
Number of successful extensions: 295
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 289
Number of HSP's successfully gapped: 14
Length of query: 128
Length of database: 11,106,569
Length adjustment: 87
Effective length of query: 41
Effective length of database: 8,721,377
Effective search space: 357576457
Effective search space used: 357576457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 105 (45.1 bits)