BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0656500 Os07g0656500|Os07g0656500
         (782 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13630.1  | chr5:4387567-4392082 REVERSE LENGTH=1382          1281   0.0  

>AT5G13630.1 | chr5:4387567-4392082 REVERSE LENGTH=1382
          Length = 1381

 Score = 1281 bits (3314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/806 (77%), Positives = 699/806 (86%), Gaps = 37/806 (4%)

Query: 14   AEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQSLTSYASLLEENWGKPPGNLISDG--- 70
            AE LIEE+IHDKEAQF+SPNLNVAY+M VREYQ LT YA+ LEENWGKPPGNL SDG   
Sbjct: 548  AETLIEEIIHDKEAQFSSPNLNVAYKMGVREYQDLTPYANALEENWGKPPGNLNSDGENL 607

Query: 71   ----------------------DPMRLLFSKSASPHHGFAAYHTFVEKIFQADAV----- 103
                                  DPMRLLFSKSASPHHGFAAY+++VEKIF+ADAV     
Sbjct: 608  LVYGKAYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSYVEKIFKADAVLHFGT 667

Query: 104  ----TLVP---MGLLSSCQGSNLIGNIPNIYCYAANNPSEATVGKRRSYANTISYLTPPA 156
                  +P   +G+  +C   +LIGNIPN+Y YAANNPSEAT+ KRRSYANTISYLTPPA
Sbjct: 668  HGSLEFMPGKQVGMSDACFPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPA 727

Query: 157  ENVGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQLILTRMFPLPEERMELPPN 216
            EN GLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQ  L +   LP+E +EL P 
Sbjct: 728  ENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVDLPDEGLELSPK 787

Query: 217  ERDLIVGKVYAKIMEIESRLLPCGLHVIGEPPSAIEAVATLVNIASLDCPEDEIYSLPNI 276
            +RD +VGKVY+KIMEIESRLLPCGLHVIGEPPSA+EAVATLVNIA+LD PEDEI +LP+I
Sbjct: 788  DRDSVVGKVYSKIMEIESRLLPCGLHVIGEPPSAMEAVATLVNIAALDRPEDEISALPSI 847

Query: 277  LAQTVGRNIEDVYRGSDKGILADVELLRQITEASRGAITAFVERTTNSKGQVVDVTNKLS 336
            LA+ VGR IEDVYRGSDKGIL+DVELL++IT+ASRGA++AFVE+TTNSKGQVVDV++KL+
Sbjct: 848  LAECVGREIEDVYRGSDKGILSDVELLKEITDASRGAVSAFVEKTTNSKGQVVDVSDKLT 907

Query: 337  TMLGFGLSEPWVQHLSKTKFIRADREKLRTLFTFLGECLKLIVADNELGSLKLALEGSYV 396
            ++LGFG++EPWV++LS TKF RA+R+KLRT+F FLGECLKL+V DNELGSL  ALEG YV
Sbjct: 908  SLLGFGINEPWVEYLSNTKFYRANRDKLRTVFGFLGECLKLVVMDNELGSLMQALEGKYV 967

Query: 397  EPGPGGDPIHNLKVLPTGKSIHALDPQTMPTIAAMKSAKIVVDRLLEWQKVDNGGKYPET 456
            EPGPGGDPI N KVLPTGK+IHALDPQ +PT AAM SAKIVV+RL+E QK++N GKYPET
Sbjct: 968  EPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMASAKIVVERLVERQKLENEGKYPET 1027

Query: 457  IALVLWGTDNIKTNGESLAQVLWMIGVRSVADTFGRVNRVEPVSLEELGRPRIDVVVNCS 516
            IALVLWGTDNIKT GESL QVLWMIGVR +ADTFGRVNRVEPVSLEELGRPRIDVVVNCS
Sbjct: 1028 IALVLWGTDNIKTYGESLGQVLWMIGVRPIADTFGRVNRVEPVSLEELGRPRIDVVVNCS 1087

Query: 517  GVFRDLFINQTNLLDRAVKMVAELDEPEEMNYVRKHAQEQAQELGVSLREATTRVFSNAS 576
            GVFRDLFINQ NLLDRA+KMVAELDEP E N+VRKHA EQA+ LG+ +REA TRVFSNAS
Sbjct: 1088 GVFRDLFINQMNLLDRAIKMVAELDEPVEQNFVRKHALEQAEALGIDIREAATRVFSNAS 1147

Query: 577  GSYSSNVNLAVENASWTDEKQLQDMYLSRKSFAFDSDAPGAGMREQRKTFELALATADAT 636
            GSYS+N++LAVEN+SW DEKQLQDMYLSRKSFAFDSDAPGAGM E+++ FE+AL+TA+ T
Sbjct: 1148 GSYSANISLAVENSSWNDEKQLQDMYLSRKSFAFDSDAPGAGMAEKKQVFEMALSTAEVT 1207

Query: 637  FQNLDSSEISLTDVSHYFDSDPTKLVQGLRKDERAPSSYIADTTTANAQVRTLSETVRLD 696
            FQNLDSSEISLTDVSHYFDSDPT LVQ LRKD++ PSSYIADTTTANAQVRTLSETVRLD
Sbjct: 1208 FQNLDSSEISLTDVSHYFDSDPTNLVQSLRKDKKKPSSYIADTTTANAQVRTLSETVRLD 1267

Query: 697  ARTKLLNPKWYKGMMKSGYEGVREIEKRLTKTVVWSAKSGQVVNWVYEEANATFIEDEAM 756
            ARTKLLNPKWY+GMM SGYEGVREIEKRL+ TV WSA SGQV NWVYEEAN+TFI+DE M
Sbjct: 1268 ARTKLLNPKWYEGMMSSGYEGVREIEKRLSNTVGWSATSGQVDNWVYEEANSTFIQDEEM 1327

Query: 757  RKRLMDTNPNSFRKLVQTCLEASGRG 782
              RLM+TNPNSFRK++QT LEA+GRG
Sbjct: 1328 LNRLMNTNPNSFRKMLQTFLEANGRG 1353



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.132    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,450,795
Number of extensions: 700409
Number of successful extensions: 1860
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1857
Number of HSP's successfully gapped: 1
Length of query: 782
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 676
Effective length of database: 8,200,473
Effective search space: 5543519748
Effective search space used: 5543519748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)