BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0645100 Os07g0645100|AK106607
(842 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17930.1 | chr2:7784455-7802230 REVERSE LENGTH=3859 1317 0.0
AT4G36080.1 | chr4:17059996-17077628 REVERSE LENGTH=3835 1261 0.0
AT1G50030.1 | chr1:18522626-18539619 REVERSE LENGTH=2482 71 2e-12
>AT2G17930.1 | chr2:7784455-7802230 REVERSE LENGTH=3859
Length = 3858
Score = 1317 bits (3408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/845 (73%), Positives = 716/845 (84%), Gaps = 17/845 (2%)
Query: 1 INNTNLEFFPVKNKAEIFRLRGDFLLKMNDCENANVAYSNAITLFKHLPKAWISWGNYCD 60
IN+TNLE+FP K KAEIFRL+GDF LK+ND E+AN+AYSNAITLFK+LPK WISWG+YCD
Sbjct: 3028 INSTNLEYFPDKIKAEIFRLKGDFHLKLNDTESANIAYSNAITLFKNLPKGWISWGSYCD 3087
Query: 61 MVFKETKDEIWLEYAVSCFFQGIKYGVSNSRSHLARILYLLSFDTQNEPAGRALDKYLEQ 120
M ++ET++EIWLEYAVSCF QGI++GVSNSRSH+AR+LYLLSFDT NEP GR DK+L+Q
Sbjct: 3088 MAYQETQEEIWLEYAVSCFLQGIRFGVSNSRSHIARVLYLLSFDTANEPVGRVFDKHLDQ 3147
Query: 121 LPHWVWLSWIPQLLLSLQRSEAQHCKLVLLKIAQVYPQALYYWLRTYLMERRDVATKTEM 180
+PHWVWLSWIPQLLLSLQR+EA HCKLVLLKIA V+PQALYYWLRTYL+ERRD K+E+
Sbjct: 3148 VPHWVWLSWIPQLLLSLQRTEAPHCKLVLLKIAAVFPQALYYWLRTYLLERRDAVNKSEL 3207
Query: 181 GRIXXXXXXXXXXXXXXXXXXSEGNARTSNLGGGNMTSDNQVHQATQSGGAAVSHDGGNL 240
GR+ + NA + GG N+ S+NQ+HQ Q+ GA +HD GN
Sbjct: 3208 GRLVLAQRM-------------QQNATGAGHGGSNLPSENQIHQGAQTSGAGGTHDSGNP 3254
Query: 241 QGQESDRSNVEGGTSAGHDQG--QPSSTGADGSQMPARRNNGLGWVTSAASAFDAAKDIM 298
GQES+RS E G DQ Q SS D ++ RRN G SAA AFDAAKDIM
Sbjct: 3255 HGQESERSTTENNLHPGSDQPMHQSSSAINDNNENTVRRN-GASLAISAAGAFDAAKDIM 3313
Query: 299 EALRSKHTNLANELEVLLSEIGSRFVTLPEERLLAVVNALLHRCYKYPTATTGEVPQSLK 358
EALR KH NLA+ELEVLL+EIGSRFVTLPEERLLAVVNALLHRCYKYPTATT EVPQ LK
Sbjct: 3314 EALRGKHNNLASELEVLLTEIGSRFVTLPEERLLAVVNALLHRCYKYPTATTAEVPQPLK 3373
Query: 359 KELSGVCRACFSQDAVNKHVDFVKEYKQDFERDLDPESATTFPATLAELTERLKHWKNVL 418
KELSGVCRACFS DAV KHV+FVKEYKQDFER LDPES TTFPATLAELT RLK WKN+L
Sbjct: 3374 KELSGVCRACFSADAVTKHVEFVKEYKQDFERHLDPESTTTFPATLAELTARLKKWKNIL 3433
Query: 419 QSNVEDRFPAILKLEEESKILRDFHVVDIELPGQYFTDQEVAPDHTVKLDRVGPDIPIVR 478
QSNVEDRFPA+L+LE+ES++LRDF+VVD+E+PGQYF DQEVAPDHTVKLDRVG D+PIVR
Sbjct: 3434 QSNVEDRFPAVLRLEDESRVLRDFNVVDVEIPGQYFADQEVAPDHTVKLDRVGADVPIVR 3493
Query: 479 RHGSSFRRLTLIGSDGSQRHFIVQTSLTPNARSDERMLQLFRVLNKMFDKHKESRQRHLA 538
RHGSSFRRLTLIGSDGSQ+HFIVQTSLTPNARSDER+LQLFRV+N+MFDKHKESR+RH+
Sbjct: 3494 RHGSSFRRLTLIGSDGSQKHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKESRRRHIG 3553
Query: 539 IHTPIIIPVWSQVRMVEDDLMYSTFLEVYEINCARHNREADSPITIFKEQLNQAISGQVS 598
IHTPIIIPVWSQVRMVEDDLMY+TFLEVYE +CAR++READ PIT FKEQLNQAISGQ+S
Sbjct: 3554 IHTPIIIPVWSQVRMVEDDLMYNTFLEVYENHCARNDREADLPITHFKEQLNQAISGQIS 3613
Query: 599 PEAVVELRLQAYNEITKNIVNDNIFSQYMHKILPTGNHLWTFKKQFAIQVALSCFMSYML 658
EA+ +LRLQAY +ITK +VND+IFSQYM+K L +G+H+W FKKQFA+Q+A+S FMS+ML
Sbjct: 3614 AEAIGDLRLQAYIDITKTLVNDSIFSQYMYKTLMSGSHMWAFKKQFAVQLAVSSFMSFML 3673
Query: 659 QIGGRAPNKILFAKNTGKIFQNDFHPAYDPNGMIEFNELVPFRLTRNMQAFFSNFGVEGL 718
QIGGR+PNK+LFAKNTGK+FQ DFHPAYD NGMIEFNE VPFRLTRNMQAFFS FGVEGL
Sbjct: 3674 QIGGRSPNKVLFAKNTGKMFQTDFHPAYDANGMIEFNEPVPFRLTRNMQAFFSQFGVEGL 3733
Query: 719 IVSAMCSAAQSVVSPKQSQHIWHHLAMFFRDELLSWSWRRPLGIPSVPVAA-GMINPLDF 777
++S+MCSAAQ+V+S KQ++H+ + LAMFFRDELLSW RRPLG+P PV +NP +
Sbjct: 3734 LMSSMCSAAQAVISSKQNEHLRYQLAMFFRDELLSWFGRRPLGVPIPPVGGIATLNPAEL 3793
Query: 778 QQKVINNVEHVITRIKLISPHYLADEEENSSEPPQSVQRGVTDLVEAALSSRNLCMMDPT 837
+ KV NVE VI RI+ I+P Y ++E+EN+ EPPQSVQRGV +LVEAALS RNLCMMDPT
Sbjct: 3794 KHKVNANVEDVIKRIRGIAPQYFSEEDENTVEPPQSVQRGVNELVEAALSPRNLCMMDPT 3853
Query: 838 WHPWF 842
WHPWF
Sbjct: 3854 WHPWF 3858
>AT4G36080.1 | chr4:17059996-17077628 REVERSE LENGTH=3835
Length = 3834
Score = 1261 bits (3263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/843 (70%), Positives = 703/843 (83%), Gaps = 28/843 (3%)
Query: 1 INNTNLEFFPVKNKAEIFRLRGDFLLKMNDCENANVAYSNAITLFKHLPKAWISWGNYCD 60
+N+TNLEFF KNKAEIFRL+GDF LK+ND E AN+AYSNAITLFK+LPK WISWGNYCD
Sbjct: 3019 VNSTNLEFFLAKNKAEIFRLKGDFHLKLNDTEGANLAYSNAITLFKNLPKGWISWGNYCD 3078
Query: 61 MVFKETKDEIWLEYAVSCFFQGIKYGVSNSRSHLARILYLLSFDTQNEPAGRALDKYLEQ 120
M +++T+DEIWLEYAVSCF QGI++GVSNSRSH+AR+LYLLSFD NEP GR DK+L+Q
Sbjct: 3079 MAYQDTQDEIWLEYAVSCFLQGIRFGVSNSRSHMARVLYLLSFDPTNEPVGRIFDKHLDQ 3138
Query: 121 LPHWVWLSWIPQLLLSLQRSEAQHCKLVLLKIAQVYPQALYYWLRTYLMERRDVATKTEM 180
+PHWVWLSWIPQLL+SLQR+EA HCKLVL+KIA V+PQALYYWLRTYL+ERRD K+E+
Sbjct: 3139 VPHWVWLSWIPQLLISLQRTEAPHCKLVLMKIAAVFPQALYYWLRTYLLERRDAVNKSEL 3198
Query: 181 GRIXXXXXXXXXXXXXXXXXXSEGNARTSNLGGGNMTSDNQVHQATQSGGAAVSHDGGNL 240
R+ S G+ GGGN+ S+ Q+HQ +Q+ GA +HDGGNL
Sbjct: 3199 SRVVLAQRMQQNVPGV-----SAGH------GGGNLPSETQIHQGSQTSGAVGTHDGGNL 3247
Query: 241 QGQESDRSNVEGGTSAGHDQGQPSSTGADGSQMPARRNNGLGWVTSAASAFDAAKDIMEA 300
QES+R+ + +G+DQ P +++ + SAA AFDAAKD+MEA
Sbjct: 3248 HVQESERATMINNVHSGNDQ-------------PMNQSSSMA--ISAAGAFDAAKDVMEA 3292
Query: 301 LRSKHTNLANELEVLLSEIGSRFVTLPEERLLAVVNALLHRCYKYPTATTGEVPQSLKKE 360
LRSKH NLA+ELEVLL+EIGSRFVTLPEERLLAVVNALLHRCYKYPTATT EVPQ LKKE
Sbjct: 3293 LRSKHNNLASELEVLLTEIGSRFVTLPEERLLAVVNALLHRCYKYPTATTAEVPQPLKKE 3352
Query: 361 LSGVCRACFSQDAVNKHVDFVKEYKQDFERDLDPESATTFPATLAELTERLKHWKNVLQS 420
LSGVCRACFS DAV KHV FV+EYKQDFERDLDPES +FP TLA+LT++LK WKN+LQS
Sbjct: 3353 LSGVCRACFSADAVTKHVAFVREYKQDFERDLDPES-NSFPVTLADLTKKLKDWKNILQS 3411
Query: 421 NVEDRFPAILKLEEESKILRDFHVVDIELPGQYFTDQEVAPDHTVKLDRVGPDIPIVRRH 480
NVEDRFP +L+LE+ESK+LRDF+VVD+E+PGQYF DQEVAPDHTVKLDRVG DI IVRRH
Sbjct: 3412 NVEDRFPVLLRLEDESKVLRDFNVVDVEIPGQYFADQEVAPDHTVKLDRVGADIQIVRRH 3471
Query: 481 GSSFRRLTLIGSDGSQRHFIVQTSLTPNARSDERMLQLFRVLNKMFDKHKESRQRHLAIH 540
GSS RRLTLIGSDGSQ+HFIVQTSLTPNARSDER+LQLFRV+N+MFDKHKESR+RHL +H
Sbjct: 3472 GSSCRRLTLIGSDGSQKHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKESRRRHLGLH 3531
Query: 541 TPIIIPVWSQVRMVEDDLMYSTFLEVYEINCARHNREADSPITIFKEQLNQAISGQVSPE 600
TPIIIPVWSQVRMVEDDLMY+TFLEVYE +C R+ RE+D PIT FKE+LNQAI+GQ+SPE
Sbjct: 3532 TPIIIPVWSQVRMVEDDLMYNTFLEVYENHCGRNGRESDLPITYFKEKLNQAITGQISPE 3591
Query: 601 AVVELRLQAYNEITKNIVNDNIFSQYMHKILPTGNHLWTFKKQFAIQVALSCFMSYMLQI 660
A+ +LRLQAY EITKNIVND IFSQYM+K +G+HLW FKKQFA+Q+A+S FMS++LQI
Sbjct: 3592 AIGDLRLQAYGEITKNIVNDTIFSQYMYKTSMSGSHLWAFKKQFAVQLAVSNFMSFILQI 3651
Query: 661 GGRAPNKILFAKNTGKIFQNDFHPAYDPNGMIEFNELVPFRLTRNMQAFFSNFGVEGLIV 720
GGR+PNKILFAKN+GK+FQ DFHP+YD NGMIE NE VPFRLTRNM AF S+FGVEG ++
Sbjct: 3652 GGRSPNKILFAKNSGKMFQTDFHPSYDSNGMIELNEPVPFRLTRNMHAFLSHFGVEGPLM 3711
Query: 721 SAMCSAAQSVVSPKQSQHIWHHLAMFFRDELLSWSWRRPLGIPSVPVAA-GMINPLDFQQ 779
S MCSA+Q+V S KQ++H+ + LAMFFRDELLSW RRPLG+P PVA ++ + +
Sbjct: 3712 SNMCSASQAVFSSKQNEHLRYQLAMFFRDELLSWFGRRPLGVPIPPVAGIATLSSPELKH 3771
Query: 780 KVINNVEHVITRIKLISPHYLADEEENSSEPPQSVQRGVTDLVEAALSSRNLCMMDPTWH 839
KV +NV+ VI RI+ I+P Y ++E+ENS EPPQSVQRGV++LVEAALS RNLCMMDPTWH
Sbjct: 3772 KVNSNVDDVIGRIRGIAPQYFSEEDENSVEPPQSVQRGVSELVEAALSPRNLCMMDPTWH 3831
Query: 840 PWF 842
PWF
Sbjct: 3832 PWF 3834
>AT1G50030.1 | chr1:18522626-18539619 REVERSE LENGTH=2482
Length = 2481
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 172/390 (44%), Gaps = 45/390 (11%)
Query: 380 FVKEYKQDFERDLDPESATTFPATLAELTERLKHWKNVLQSNVEDRFPAILKLEEESKIL 439
F++ Y+ + + + AELT+ + +V + ++ + ++ L+ ES
Sbjct: 1979 FIEAYRHELKEAHECCCNYKITGKDAELTQAWDLYYHVFK-RIDKQLASLTTLDLESVSP 2037
Query: 440 RDFHVVDIEL--PGQYFTDQEVAPDHTVKLDRVGPDIPIVRRHGSSFRRLTLIGSDGSQR 497
D+EL PG Y D V V + + ++ R+LT+ G+DG
Sbjct: 2038 ELLLCRDLELAVPGTYRADAPV-----VTISSFSRQLVVITSKQRP-RKLTIHGNDGEDY 2091
Query: 498 HFIVQTSLTPNARSDERMLQLFRVLNKMFDKHKESRQRHLAIHTPIIIPVWSQVRMVEDD 557
F+++ + R DER++QLF ++N + + +++ ++ L+I +IP
Sbjct: 2092 AFLLKGH--EDLRQDERVMQLFGLVNTLLENSRKTAEKDLSIQRYSVIP----------- 2138
Query: 558 LMYSTFLEVYEINC------ARHNREADSPITIFKEQLNQAISGQVS--PEAVVELRLQA 609
L ++ L + NC R +R+A I LNQ +S P+ L L A
Sbjct: 2139 LSPNSGLIGWVPNCDTLHHLIREHRDARKII------LNQENKHMLSFAPD-YDNLPLIA 2191
Query: 610 YNEITKNIVNDNIFSQYMHKIL---PTGNHLWTFKK-QFAIQVALSCFMSYMLQIGGRAP 665
E+ + + +N + ++L + +W ++ + +A+ + Y+L +G R P
Sbjct: 2192 KVEVFEYAL-ENTEGNDLSRVLWLKSRSSEVWLERRTNYTRSLAVMSMVGYILGLGDRHP 2250
Query: 666 NKILFAKNTGKIFQNDFHPAYDPNGMIE-FNELVPFRLTRNMQAFFSNFGVEGLIVSAMC 724
+ ++ + +GKI DF ++ + E F E VPFRLTR + G+EG S
Sbjct: 2251 SNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCE 2310
Query: 725 SAAQSVVSPKQSQHIWHHLAMFFRDELLSW 754
+ Q + + K S + + F D L++W
Sbjct: 2311 NVMQVLRTNKDS--VMAMMEAFVHDPLINW 2338
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,200,660
Number of extensions: 764350
Number of successful extensions: 2209
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2202
Number of HSP's successfully gapped: 3
Length of query: 842
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 735
Effective length of database: 8,173,057
Effective search space: 6007196895
Effective search space used: 6007196895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)