BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0638100 Os07g0638100|AK100429
(659 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G01870.1 | chr4:808473-810431 REVERSE LENGTH=653 698 0.0
AT1G21680.1 | chr1:7613028-7615148 FORWARD LENGTH=707 421 e-118
AT1G21670.1 | chr1:7610409-7612520 FORWARD LENGTH=704 371 e-103
>AT4G01870.1 | chr4:808473-810431 REVERSE LENGTH=653
Length = 652
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/663 (52%), Positives = 445/663 (67%), Gaps = 20/663 (3%)
Query: 3 PTGTIVFATVGVTNFGFDVFSAAVPLPPMEEDAERRHTDGVSVNFNAQFVDDGGEEVAFV 62
P GTI+F TVG T++GFDVFS + ERR TDGVSVNFNAQFV+D ++V FV
Sbjct: 4 PKGTIIFTTVGRTHYGFDVFSLNIAT-----SVERRLTDGVSVNFNAQFVNDKSDDVVFV 58
Query: 63 SERGGAAGLFRCRPGPEQRAEPLPTVEGSLFHDRPTV-RGGRLYFVSAHEQPPAPFRSWA 121
SER G+A +++ R G + E +P S FHDRP + + RLYF+SAHEQP F++W+
Sbjct: 59 SERNGSARIYKTRSGI-SKPEQIPGAPESYFHDRPIITQNNRLYFISAHEQPDRYFKNWS 117
Query: 122 AVYATEIGS--KETVRVSPPGVVDMSPAVSDSGELVAVASYGDRPWAFDFRVLETEXXXX 179
A+Y E+ S +E RV+PP D SPAVS SG+ +AVASYG R W +F + T+
Sbjct: 118 ALYTVELNSAKREVTRVTPPDTADFSPAVSQSGDFLAVASYGTRSWGGEFHEINTDITVF 177
Query: 180 XXXXXXXXXXXXXXXXWPTWHGEGTVFFHRVADDGWWSVFRVDVSPETLEPTG---GERR 236
WPTW G+ TVFFH ADDGWWS+FRVD+ E T R
Sbjct: 178 KASKPETRVVICERGGWPTWSGDSTVFFHHQADDGWWSIFRVDIPENFTEYTDFPITPIR 237
Query: 237 VTPPGLHCFTPAAVGRGGGGRWIAVATRRKGRAQRHVELFDLETESFSPLTERLNPELHH 296
VTP GLHCFTPAA G+ IA+ATRR+G RH+E++DLE +F P+TE LNP HH
Sbjct: 238 VTPSGLHCFTPAAFR---DGKRIALATRRRGVNHRHIEIYDLENTTFQPVTESLNPSFHH 294
Query: 297 YNPFFSPSGDRVGYHRFRGAGARGDSVVPYLQPVQSPVSSLRMLRVYGTFPSFSPDAAHL 356
YNPF SP + +GYHRFRG +G+S+VP ++ + SP+ +LR+LR+ G+FPS SP+ +
Sbjct: 295 YNPFVSPDSEFLGYHRFRGESTQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLI 354
Query: 357 AMNGDFFKTPGVTILRSDGAKRWVLTREPNLFYTSWSPAESGVIFTSMGPIFETTKATVR 416
A+N DF G+ + +SDG+KRW L ++ FY SWSP E VI+TS+GPIF + V+
Sbjct: 355 ALNSDFDINGGIKVSKSDGSKRWTLIKDRTAFYNSWSPTERHVIYTSLGPIFSPARIAVQ 414
Query: 417 IARLEFDAGELTTGRDEVAATLKVLTRPEAGNDAFPAVSPCGKWVVFRSGRSGHKNLYIV 476
IAR++FD +LT ++++ +K+LT GN+AFP+ SP GK +VFRSGRSGHKNLYIV
Sbjct: 415 IARIKFDPSDLTADKEDLPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHKNLYIV 474
Query: 477 DAAHGEDVGAGEGTIRRLTDGEWIDTMPSWSPDGSLIAFSSNRHDPTNAAVFSIYLVRPD 536
DA +GE G G IRRLTDG WIDTMP WSP G LI FSSNRH+P N AVF Y+VRPD
Sbjct: 475 DAVNGESNGGG---IRRLTDGPWIDTMPCWSPKGDLIGFSSNRHNPENTAVFGAYVVRPD 531
Query: 537 GSGLRRVHVAGPAGSAAADRERINHVCFSPDSRWLLFTANFGGVMAEPISAPNQFQPYGD 596
G+GLRR+ ++GP GS A RER+NHV F+ D WL+F AN GV AEP++ PNQFQPYGD
Sbjct: 532 GTGLRRIQISGPEGSEEAARERVNHVSFNKDGDWLVFAANLSGVTAEPVTMPNQFQPYGD 591
Query: 597 LYVCRLDGSGLVRLTCNAYENGTXXXXXXXXXXXXLESLSLGPGAGDESLGEFDEPLWLT 656
LYV +LDG+GL RLT N YE+GT L L+L GD+ G+F+EPLW++
Sbjct: 592 LYVVKLDGTGLRRLTWNGYEDGT--PTWHTADELDLSQLNLNGQDGDKLEGQFEEPLWIS 649
Query: 657 CDV 659
CD+
Sbjct: 650 CDI 652
>AT1G21680.1 | chr1:7613028-7615148 FORWARD LENGTH=707
Length = 706
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/660 (38%), Positives = 361/660 (54%), Gaps = 76/660 (11%)
Query: 6 TIVFATVGVTNFGFDVFSAAVPLPPMEEDAERRHTDGVSVNFNA---------------- 49
TI+F T+G +++ FD+F+ + PP E R TDG SVNFN
Sbjct: 33 TIIFTTLGRSHYEFDIFALSTTQPP-SVSGELRITDGESVNFNGYFPSPSPALLSLLPDE 91
Query: 50 ---QFVDDGGEEVAFVSERGGAAGLF-----------------------RCRPGPEQRAE 83
Q D + +V+ER G + L+ R + R +
Sbjct: 92 TLIQMEDSSPLHLIYVTERNGTSSLYYDLVYGGNSDFKTKRRSVLEAPSRVQVPLLSRFD 151
Query: 84 PLPTVEGSLFHDRPTVRGGRLYFVSAHEQPPAPFRSWAAVYATEIGSKETVRVSPPGVVD 143
L + + F D+P++ G + +VS HE P SW AVY+TE+ + T R++P GV D
Sbjct: 152 HLSGMTVNSFKDKPSLSGEFIVYVSTHESSGEPRASWTAVYSTELKTGLTRRLTPSGVAD 211
Query: 144 MSPAVSDSGELVAVASYGDRPWAFDFRVLETEXXXXXXXXXXXXXXXXXXXXWPTWHGEG 203
SPAVS SG L AVASYG+R W + L T+ WP W E
Sbjct: 212 FSPAVSPSGNLTAVASYGERGWTGEVEELRTDIYVFLTRDGSHRVKVVEHGGWPCWVDES 271
Query: 204 TVFFHRVAD-DGWWSVFRV---DVSPETLEPTGGERRVTPPGLHCFTPAAVGRGGGGRWI 259
T++FHR ++ DGW SV+R + P T E +R VTPPG+H FTPA ++
Sbjct: 272 TLYFHRRSEEDGWISVYRAILPENGPLTTESVTIQR-VTPPGVHAFTPAT--SPNNHEFV 328
Query: 260 AVATRRKGRAQRHVELFDLETESFSPLTERLNPELHHYNPFFSPSGDRVGYHRFRGAGAR 319
AVATRR G RHVELFDL+ F LT + P+ HH NPF SP RVGYH RG
Sbjct: 329 AVATRRPGSDYRHVELFDLKRNEFIELTRLVAPKSHHLNPFLSPDSSRVGYHSCRGDANG 388
Query: 320 GDSVVPYLQPVQSPVSSLRMLRVYGTFPSFSPDAAHLAMNGDFFKTPGVTILRSDGAKRW 379
S + +L+ +Q+ L + R+ G+FPSFSP +A + K PGV +++ DG+ +
Sbjct: 389 RRSPLLFLENIQTTTRDLSLFRIDGSFPSFSPGGDRIA----YVKMPGVFVVKPDGSGQR 444
Query: 380 VLTREPNLFYTSWSPAESGVIFTSMGPIFETTKATVRIARLEFDAGELTTGRDEVAATLK 439
+ + F T+W P G++++S GP F T + V + ++ DA D+ ++ +
Sbjct: 445 EVYKG-MAFSTAWDPVRPGIVYSSSGPTFATERTEVDVISIDVDAA------DKSSSVRR 497
Query: 440 VLTRPEAGNDAFPAVSPCGKWVVFRSGRSGHKNLYIVDAAHGEDVGAGEGTIRRLTDGEW 499
+ T N+AFP SP GK +VFRSGR+GHKNLYI+DA GE G + RLT+G W
Sbjct: 498 LTT--NGKNNAFPWPSPDGKRIVFRSGRTGHKNLYIMDAEKGE-----SGGLWRLTEGAW 550
Query: 500 IDTMPSWSPDGSLIAFSSNRHDPTNAAVFSIYLVRPDGSGLRRVHVAGPAGSAAADRERI 559
DTM +WSPDG IAF+S+R P + + F ++L+ P+G+GLR++ +G G R
Sbjct: 551 TDTMCNWSPDGEWIAFASDRESPGSGS-FELFLIHPNGTGLRKLIQSGTGG-------RT 602
Query: 560 NHVCFSPDSRWLLFTANFGGVMAEPISAPNQFQPYGDLYVCRLDGSGLVRLTCNAYENGT 619
NH FSPDS+ L+FT+++ G+ AEPIS P+ +QPYGD++ +LDGS + RLT N+YE+GT
Sbjct: 603 NHPIFSPDSKSLVFTSDYAGISAEPISNPHHYQPYGDIFTVKLDGSNVRRLTHNSYEDGT 662
>AT1G21670.1 | chr1:7610409-7612520 FORWARD LENGTH=704
Length = 703
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/651 (37%), Positives = 331/651 (50%), Gaps = 73/651 (11%)
Query: 6 TIVFATVGVTNFGFDVFSAAVPLPPMEEDAERRHTDGVSVNFNAQF-------------- 51
TI+F T+G F FD+F+ P E R TDG S+NFN F
Sbjct: 33 TILFTTIGRPTFEFDIFTLPTSHRPPSPADEHRLTDGKSINFNGYFASPSTALISLLPKR 92
Query: 52 --VDDGGEEVAFVSERGGAAGL---------------FRCRPGPEQRAEPLPTVEGSLFH 94
+ + +V+ER G L G EQ++ + +
Sbjct: 93 TQIQPQDVHLIYVTERAGTPSLNYDVVHSDNVGSRIQVPLFSGEEQQSG----MNVNSMK 148
Query: 95 DRPTVRGGRLYFVSAHEQPPAPFRSWAAVYATEIGSKETVRVSPPGVVDMSPAVSDSGEL 154
D P + G L VS HE P P SWAAVY+TE+ +K T R++P G+ D SPAVS SG+
Sbjct: 149 DTPVLTNGYLVHVSTHENPGKPMASWAAVYSTELRTKSTRRLTPLGIADFSPAVSPSGKW 208
Query: 155 VAVASYGDRPWAFDF--RVLETEXXXXXXXXXXXXXXXXXXXXWPTWHGEGTVFFHRVAD 212
AVAS+G++ W + + + ++ WP W + T++FHR +D
Sbjct: 209 TAVASFGEKGWTWSMVEKEISSDVYVFLTQDGTQRVKVVEQGGWPRWVDDSTLYFHRKSD 268
Query: 213 DGWWSVFRVDVSPETLEPTGGE---RRVTPPGLHCFTPAAVGRGGGGRWIAVATRRKGRA 269
DGW SV+R + P+T T +RVTPPGLH FTPA +IAVATRR G
Sbjct: 269 DGWISVYRA-ILPKTGPVTTKSVTIQRVTPPGLHAFTPAT--SPNNNNFIAVATRRPGSE 325
Query: 270 QRHVELFDLETESFSPLTERLNPELHHYNPFFSPSGDRVGYHRFRGAGARGDSVVPYLQP 329
RHVELFDL+ F LT ++P+ HH+NPF SP RVGYH RG + LQ
Sbjct: 326 IRHVELFDLKKNEFVELTRLVSPKSHHFNPFLSPDSSRVGYHSCRGDATGRKTPRNLLQS 385
Query: 330 VQSPVSSLRMLRVYGTFPSFSPDAAHLAMNGDFFKTPGVTILRSDGA-KRWVLTREPNL- 387
+++ + L + R G FPS SP+ A F GV ++ DG+ R +L P +
Sbjct: 386 LKTTSNDLSLFRFDGAFPSISPEGDRFA----FVSFTGVFVVNPDGSGLRQLL---PQMG 438
Query: 388 FYTSWSPAESGVIFTSMGPIFETTKATVRIARLEFDAGELTTGRDEVAATLKVLTRPEAG 447
F T W P G+++TS GP K+ + I + DA T ++ T
Sbjct: 439 FGTVWDPIRHGIVYTSSGPALAPGKSQIDILAINVDAPSPATAVKKLTTT--------GE 490
Query: 448 NDAFPAVSPCGKWVVFRSGRSGHKNLYIVDAAHGEDVGAGEGTIRRLTDGEWIDTMPSWS 507
N+AFP SP GK +VFRS RSG KNLYI+DA GE G + RLT+G W DT+ +WS
Sbjct: 491 NNAFPWPSPDGKRIVFRSARSGTKNLYIMDAEKGE-----SGGLFRLTNGNWNDTIATWS 545
Query: 508 PDGSLIAFSSNRHDPTNAAVFSIYLVRPDGSGLRRVHVAGPAGSAAADRERINHVCFSPD 567
PDG+ I F+SNR P + +IY+V PDG+GLR++ G + H FSPD
Sbjct: 546 PDGNWIVFASNREFP-GTLLMNIYVVHPDGTGLRKL-AQNLTGLVSM------HPMFSPD 597
Query: 568 SRWLLFTANFGGVMAEPISAPNQFQPYGDLYVCRLDGSGLVRLTCNAYENG 618
S+ ++FT + G+ AE I P+ P +++ LDGSGL RLT N+ E+G
Sbjct: 598 SKRIVFTTIYAGISAEQIGNPHFNVPSSEIFTVNLDGSGLTRLTHNSVEDG 648
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,676,427
Number of extensions: 709058
Number of successful extensions: 1345
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1299
Number of HSP's successfully gapped: 3
Length of query: 659
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 554
Effective length of database: 8,227,889
Effective search space: 4558250506
Effective search space used: 4558250506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)