BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0637500 Os07g0637500|Os07g0637500
         (645 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09450.1  | chr1:3049066-3052858 FORWARD LENGTH=600            452   e-127

>AT1G09450.1 | chr1:3049066-3052858 FORWARD LENGTH=600
          Length = 599

 Score =  452 bits (1162), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/611 (44%), Positives = 349/611 (57%), Gaps = 46/611 (7%)

Query: 32  DLWSEIMASXXXXXXXXXXXXXXXXXXXQEASRPRGAVDVRGVAAGEKRASFEPSKRTSW 91
           DLWSE++ S                    + S    AV+   +  G + +S    KR SW
Sbjct: 6   DLWSEVIKSEEEDGDIPKIEAVFQRRKKPDKSSE--AVNFGWLVKGARTSSVNGPKRDSW 63

Query: 92  NRSLSIRGRESILFAPGTKIQPQQNPCRAQKRPPKPGNRVKRTFGGPPDLKKEKAYFEEV 151
            RSLS RGRESI        QPQ+     +K+PP P  +V +     PD +KEK YF ++
Sbjct: 64  ARSLSTRGRESIAVRAYVNNQPQKKAA-GRKKPPIPKGKVVKA----PDFQKEKEYFRDI 118

Query: 152 DAFELMEESPSPKNFGTWARGMEQNYIVHDLSAILERWKISKLAKFAA--SRPLFDIMET 209
           DAFEL+EESPSP    TW  G +    +  LS  LE+W ISK        S  L  I+E 
Sbjct: 119 DAFELLEESPSPNKSSTWTMGEQVVPEMPHLSTRLEKWLISKKLNHTCGPSSTLSKILEN 178

Query: 210 PVVPS---VRSDCSLHDSCRTPEKDRGSRTNPMRRTIPSGLSDKTSIFTSFSELKIKEEP 266
             +       +D     S +TP+K     T+ + R IPS   D+          KIK E 
Sbjct: 179 SAIHQESVCDNDAFDSLSLKTPDKSSAGNTS-VFRLIPS--CDENLAAEDVPVRKIKMES 235

Query: 267 ----DDSSIPSLSAEAMTA---FAQ----LLLVCNQSAPITLAEAFSTYCLYSSFNEDVH 315
               D+    SL+++ +     F Q    LL  C Q  P    EAFS +C          
Sbjct: 236 IDLEDELKRLSLTSDLIPTHQDFDQPILDLLSACGQMRPSNFIEAFSKFC---------- 285

Query: 316 GNSTPGSIVKLGEGTFGEAFRAGSTVCKVVPFDGTSLVNGETQKKAXXXXXXXXXXXXXX 375
               P SIVK+GEGT+GEAFRAGS+VCK+VP DG   VNGE QK+A              
Sbjct: 286 ---EPESIVKIGEGTYGEAFRAGSSVCKIVPIDGDFRVNGEVQKRADELLEEVILSWTLN 342

Query: 376 XXRADRGDNVKENSCHGFIETKDFWVCQGPYDPSLICAWEDWDAKCCSENDHPNDFSNEQ 435
             R    +   +N C  +I+T+D  +CQGPYDP LI AWE+WDAK  SENDHP DF  +Q
Sbjct: 343 QLR--ECETTAQNLCPTYIKTQDIKLCQGPYDPILIKAWEEWDAKHGSENDHP-DFPEKQ 399

Query: 436 CYIVFVQADGGRDLEKFALLDYNEACSXXXXXXXXXXXXESACEFEHRDLHWGNILLDRD 495
           CY++FV   GG+DLE F LL+++EA S            E+A EFEHRDLHWGNILL R+
Sbjct: 400 CYVMFVLEHGGKDLESFVLLNFDEARSLLVQATAGLAVAEAAFEFEHRDLHWGNILLSRN 459

Query: 496 ETQDKNHTMGFTLQGKNMCTRTFGLNVSIIDFTLSRINTGDAILFLDLSTDPALFEGPKR 555
            +     T+ F L+GK +C +TFG+ +SIIDFTLSRINTG+ ILFLDL++DP LF+GPK 
Sbjct: 460 NSD----TLPFILEGKQVCIKTFGVQISIIDFTLSRINTGEKILFLDLTSDPYLFKGPKG 515

Query: 556 DKQAETYRKMKQITNDYWEGSFPKTNVVWLIYLVDIVLQKRYSTFTSKDDRELRAFKKRL 615
           DKQ+ETYRKMK +T DYWEGSF +TNV+WLIYLVDI+L K+    +SK +RELR+ KKR+
Sbjct: 516 DKQSETYRKMKAVTEDYWEGSFARTNVLWLIYLVDILLTKKSFERSSKHERELRSLKKRM 575

Query: 616 AKYDSAKDCLT 626
            KY+SAK+ ++
Sbjct: 576 EKYESAKEAVS 586



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.132    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,400,364
Number of extensions: 574930
Number of successful extensions: 1521
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1516
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 540
Effective length of database: 8,227,889
Effective search space: 4443060060
Effective search space used: 4443060060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)