BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0634000 Os07g0634000|Os07g0634000
(425 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02370.1 | chr2:621841-623084 FORWARD LENGTH=321 253 2e-67
AT1G12450.1 | chr1:4244496-4245808 FORWARD LENGTH=304 176 3e-44
AT4G12000.1 | chr4:7193527-7194942 REVERSE LENGTH=307 173 2e-43
AT4G22850.1 | chr4:11994194-11995941 FORWARD LENGTH=297 167 1e-41
AT1G03260.1 | chr1:795678-798102 REVERSE LENGTH=275 62 8e-10
AT1G22850.1 | chr1:8080671-8082816 REVERSE LENGTH=345 50 2e-06
AT5G19070.1 | chr5:6375569-6377470 FORWARD LENGTH=281 49 5e-06
>AT2G02370.1 | chr2:621841-623084 FORWARD LENGTH=321
Length = 320
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 170/268 (63%), Gaps = 4/268 (1%)
Query: 126 WMRXXXXXXXXXSIIFAFYEWGLPLLSEKVLLPIMRWEARSFGRHXXXXXXXXXXXXFPV 185
W++ + F +WG+P + +KVL+PI++WEA +FGR FPV
Sbjct: 55 WLKALGICAVALLLTLVFGKWGVPFVFQKVLIPILQWEATAFGRPMLAIVLVVSLALFPV 114
Query: 186 VLLPSSPSMWLTXXXXXXXXXXXXXMVGTAIGMSIPYFIGSLFRERLHEWLEKKWPREIA 245
L+PS PSMWL MVGT IGM +PY IG +FR+RLH+WL K+WPR+ A
Sbjct: 115 FLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLMFRDRLHQWL-KRWPRQAA 173
Query: 246 LVKLASKGSWFKQFRVIVLLRISPFPYSMLNYTVTVTQIKYGPYICGSVVGMVPDALVNI 305
+++LA++GSWF QFRV+ + R+SPFPY++ NY + VT +++ PY GS+ GM+P+A + I
Sbjct: 174 VLRLAAEGSWFHQFRVVAIFRVSPFPYTIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYI 233
Query: 306 YSGRLILTLAGLKYHNHRLTTVEIVYNVISITVAFLVAIGFTVYAKRALDEMERSEGTCP 365
YSGRLI T A ++Y + RLTTVEIVYNVIS+ +A + + FTVYAKRAL E++ +E
Sbjct: 234 YSGRLIRTFADVQYGHQRLTTVEIVYNVISLVIAVVTTVAFTVYAKRALRELQNAEANED 293
Query: 366 EPAGIAHGSTELR--AHHQECSNSSSVP 391
E + E++ H+E N +P
Sbjct: 294 EEVQVRKVRFEMKNVVQHEE-DNHQRLP 320
>AT1G12450.1 | chr1:4244496-4245808 FORWARD LENGTH=304
Length = 303
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 131/236 (55%), Gaps = 1/236 (0%)
Query: 126 WMRXXXXXXXXXSIIFAFYEWGLPLLSEKVLLPIMRWEARSFGRHXXXXXXXXXXXXFPV 185
W++ S+ F +W P L EK L+P + W +F FP
Sbjct: 59 WVKLISLVVCLGSLAFVIIKWVGPFLIEKELIPFINWVRNTFSIPVLGLLLFASVALFPS 118
Query: 186 VLLPSSPSMWLTXXXXXXXXXXXXXMVGTAIGMSIPYFIGSLFRERLHEWLEKKWPREIA 245
+LLPSSPSMW+ + +IG+++P+ IG LF ++ EWL KK+P++ A
Sbjct: 119 ILLPSSPSMWMAGLTFGYGKGFLLILSAASIGVTLPFLIGHLFLHKMQEWL-KKYPKKAA 177
Query: 246 LVKLASKGSWFKQFRVIVLLRISPFPYSMLNYTVTVTQIKYGPYICGSVVGMVPDALVNI 305
+++ A +G+WF QF+ + L+R+SPFPY + NY T + YGPYI GS+VGMVP+ V+I
Sbjct: 178 ILRAAGEGTWFHQFQAVTLIRVSPFPYIIYNYCALATGVHYGPYILGSLVGMVPEIFVSI 237
Query: 306 YSGRLILTLAGLKYHNHRLTTVEIVYNVISITVAFLVAIGFTVYAKRALDEMERSE 361
Y+G ++ TLA H L+ VEIV NV+ V I T+YAK+ L M+ +
Sbjct: 238 YTGIMLRTLAVASDTRHTLSVVEIVVNVLGFCVTASATIVCTIYAKKKLSAMQSED 293
>AT4G12000.1 | chr4:7193527-7194942 REVERSE LENGTH=307
Length = 306
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 2/242 (0%)
Query: 121 RSPAAWMRXXXXXXXXXSIIFAFYEWGLPLLSEKVLLPIMRWEARSFGRHXXXXXXXXXX 180
RS W++ ++ A Y+W PL+ +K L+P+++WE +F
Sbjct: 60 RSVWFWIKLGLFFTFLTALGLAGYKWLYPLIMDKELIPLIKWEMETFTHPVCGILVFASV 119
Query: 181 XXFPVVLLPSSPSMWLTXXXXXXXXXXXXXMVGTAIGMSIPYFIGSLFRERLHEWLEKKW 240
FPV+L+P++PSMW+ + AIG+S+PYFI LF ++ WLE+ +
Sbjct: 120 SLFPVILIPTTPSMWVAGITFGYFYGLLLTLPAVAIGVSLPYFISYLFLNKIQGWLER-Y 178
Query: 241 PREIALVKLASKGSWFKQFRVIVLLRISPFPYSMLNYTVTVTQIKYGPYICGSVVGMVPD 300
P + A+++ A GSWF QFR + L+RISPFP+++ NY T++K+GPY+ GS+VGM P+
Sbjct: 179 PDQAAMLRAAGGGSWFHQFRAVTLIRISPFPFAVYNYCAVATRVKFGPYMAGSLVGMAPE 238
Query: 301 ALVNIYSGRLILTLAGLKYHNHR-LTTVEIVYNVISITVAFLVAIGFTVYAKRALDEMER 359
V IY+G LI TLA + L+ ++IV N+ + + T YAKR L+ M++
Sbjct: 239 IFVAIYTGILIRTLADASTAEQKGLSILQIVLNIFGFVATVVTTVLITKYAKRQLEVMKK 298
Query: 360 SE 361
+
Sbjct: 299 EK 300
>AT4G22850.1 | chr4:11994194-11995941 FORWARD LENGTH=297
Length = 296
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 2/219 (0%)
Query: 144 YEWGLPLLSEKVLLPIMRWEARSFGRHXXXXXXXXXXXXFPVVLLPSSPSMWLTXXXXXX 203
Y W PL+ +K L+P+++WE R+F FP +LLPS+PSMW+
Sbjct: 74 YIWIGPLIMDKELIPLIQWEIRTFTHPVCGLLVFASVAIFPTILLPSTPSMWIAGMTFGY 133
Query: 204 XXXXXXXMVGTAIGMSIPYFIGSLFRERLHEWLEKKWPREIALVKLASKGSWFKQFRVIV 263
+ A+G+S+PYFIG LF ++ WLE+ +P + A+++ A +G+W QF ++
Sbjct: 134 GYGFLLIISAAAVGVSLPYFIGQLFCHKIQGWLER-YPDQAAVLRAAGEGNWLHQFLLVT 192
Query: 264 LLRISPFPYSMLNYTVTVTQIKYGPYICGSVVGMVPDALVNIYSGRLILTLA-GLKYHNH 322
L+RISPFPY + NY T++KYGPYI GS++GMVP+ V IY+G L+ TLA
Sbjct: 193 LIRISPFPYILYNYCSVATRVKYGPYITGSLLGMVPEVFVAIYTGILVRTLAEASSAEEQ 252
Query: 323 RLTTVEIVYNVISITVAFLVAIGFTVYAKRALDEMERSE 361
L+ +++ N++ I T YAKR L+ M++ +
Sbjct: 253 GLSVTQVILNILGFLATVATTILITKYAKRQLETMKKED 291
>AT1G03260.1 | chr1:795678-798102 REVERSE LENGTH=275
Length = 274
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 212 VGTAIGMSIPYFIGSLFRERLHEWLEKKWPREIALVKLASKGSWFKQFRVIVLLRISP-F 270
+G +G + + +G + K +P+ A V +A + S FK +++LLR+ P
Sbjct: 91 LGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQA-VSVAIQKSGFK---IVLLLRVVPIL 146
Query: 271 PYSMLNYTVTVTQIKYGPYICGSVVGMVPDALVNIYSGRLILTLAGLKYHNHRLTTVEIV 330
P++MLNY ++VT ++ G Y+ + +GM+P +Y G + L+ + + H ++ V
Sbjct: 147 PFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTLKDLSDITHGWHEVSVFRWV 206
Query: 331 YNVISITVAFLVAIGFTVYAKRALDEMERSEGT 363
++ + +A ++ I T AK +LD+ GT
Sbjct: 207 IMMVGVALAVILIICITRVAKSSLDKALAENGT 239
>AT1G22850.1 | chr1:8080671-8082816 REVERSE LENGTH=345
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 219 SIPYFIGSLF-RERLHEWLEKKWPREIALVKLASKGSWFKQFRVIVLLRISPF-PYSMLN 276
S+ + I F RER+ + +E + +A+ K + FRV+ LLR+SP P+S+ N
Sbjct: 199 SVAFLIARYFARERILKLVEDN-KKFLAIDKAIGE----NGFRVVTLLRLSPLLPFSLGN 253
Query: 277 YTVTVTQIKYGPYICGSVVGMVPDALVNIYSG 308
Y +T +K+ PY+ GS +GM+P + + +G
Sbjct: 254 YLYGLTSVKFVPYVLGSWLGMLPGSWAYVSAG 285
>AT5G19070.1 | chr5:6375569-6377470 FORWARD LENGTH=281
Length = 280
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 212 VGTAIGMSIPYFIGSLFRERLHEWLEKKWPREIALVKLASKGSWFKQFRVIVLLRISPFP 271
VG +G + +G + K +P + V LA + S FK ++ L + PF
Sbjct: 89 VGATLGSGAAFLLGRTIGKPFVVAKLKDYP-QFQSVALAIEKSGFKICLLLRLAPLLPF- 146
Query: 272 YSMLNYTVTVTQIKYGPYICGSVVGMVPDALVNIYSGRLILTLAGLKYHNHRLTTVEIVY 331
SMLNY ++VT I+ GPY+ S +GM+P L +Y G + L+ + + + +
Sbjct: 147 -SMLNYLLSVTPIRLGPYLLSSWLGMMPITLALVYVGTTLKDLSDVTHKWSEFSPGRWAF 205
Query: 332 NVISITVAFLVAIGFTVYAKRAL--------DEMERSEGTCPEPAGIAHGSTELR 378
+ S+ ++ ++ + T AK AL +M + PE ST+L
Sbjct: 206 LISSLVISVILMVCVTKVAKDALRKALAEHGGDMNEAVAALPELTVTDDASTDLN 260
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,431,672
Number of extensions: 260419
Number of successful extensions: 717
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 710
Number of HSP's successfully gapped: 7
Length of query: 425
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 324
Effective length of database: 8,337,553
Effective search space: 2701367172
Effective search space used: 2701367172
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)