BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0624700 Os07g0624700|AF187063
(210 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G26667.1 | chr5:9276659-9277788 FORWARD LENGTH=209 320 2e-88
AT3G60180.2 | chr3:22242781-22244015 REVERSE LENGTH=205 283 4e-77
AT4G25280.1 | chr4:12939068-12940723 REVERSE LENGTH=250 225 1e-59
AT3G60961.1 | chr3:22541319-22552253 FORWARD LENGTH=137 184 2e-47
AT5G35170.1 | chr5:13419278-13423482 FORWARD LENGTH=589 102 2e-22
AT5G47840.1 | chr5:19375488-19378058 FORWARD LENGTH=284 100 1e-21
AT5G63400.1 | chr5:25393274-25394817 REVERSE LENGTH=247 84 7e-17
AT5G50370.1 | chr5:20509382-20510631 REVERSE LENGTH=249 80 6e-16
AT2G37250.1 | chr2:15641991-15643318 FORWARD LENGTH=285 79 1e-15
AT2G39270.1 | chr2:16399983-16401408 FORWARD LENGTH=296 68 4e-12
>AT5G26667.1 | chr5:9276659-9277788 FORWARD LENGTH=209
Length = 208
Score = 320 bits (821), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/187 (83%), Positives = 171/187 (91%)
Query: 22 KKVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGK 81
KK TV+FVLGGPGSGKGTQCA IVEH+G+THLSAGDLLRAEIKSGSENGTMI+NMIKEGK
Sbjct: 12 KKPTVIFVLGGPGSGKGTQCAYIVEHYGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGK 71
Query: 82 IVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFENVTKISPAFVLFFDCSEEEME 141
IVPSEVTIKLLQ A+ +N NDKFLIDGFPRNEENRAAFE VT+I P FVLFFDC EEEME
Sbjct: 72 IVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEPKFVLFFDCPEEEME 131
Query: 142 RRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHYNAKNKVKKIDAAKPISEVFEDVKA 201
+RLLGRNQGR DDNIETIRKRFKVF+ESSLPVI +Y AK KV+KI+AAKPI VFE+VKA
Sbjct: 132 KRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAKPIEAVFEEVKA 191
Query: 202 IFAPYAK 208
IF+P A+
Sbjct: 192 IFSPEAE 198
>AT3G60180.2 | chr3:22242781-22244015 REVERSE LENGTH=205
Length = 204
Score = 283 bits (724), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 158/183 (86%)
Query: 22 KKVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGK 81
KK TVVFVLGGPGSGKGTQCAN+V+HF +TH SAGDLLRAEIKSGSE G MI++MI EG+
Sbjct: 19 KKSTVVFVLGGPGSGKGTQCANVVKHFSYTHFSAGDLLRAEIKSGSEFGAMIQSMIAEGR 78
Query: 82 IVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFENVTKISPAFVLFFDCSEEEME 141
IVPSE+T+KLL AM ++ NDKFLIDGFPRNEENR FENV +I PAFVLFFDC EEE+E
Sbjct: 79 IVPSEITVKLLCKAMEESGNDKFLIDGFPRNEENRNVFENVARIEPAFVLFFDCPEEELE 138
Query: 142 RRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHYNAKNKVKKIDAAKPISEVFEDVKA 201
RR++ RNQGR DDNIETI+KRFKVFVES+LP+I +Y +K K++KI+AAK EVFE V+
Sbjct: 139 RRIMSRNQGREDDNIETIKKRFKVFVESTLPIISYYESKGKLRKINAAKSSEEVFEAVRV 198
Query: 202 IFA 204
+FA
Sbjct: 199 LFA 201
>AT4G25280.1 | chr4:12939068-12940723 REVERSE LENGTH=250
Length = 249
Score = 225 bits (573), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 136/185 (73%)
Query: 26 VVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPS 85
+ FVLGGPGSGKGTQC IVE FG HLSAGDLLR EI +ENG MI N+IK+GKIVPS
Sbjct: 45 ITFVLGGPGSGKGTQCEKIVETFGLQHLSAGDLLRREIAMHTENGAMILNLIKDGKIVPS 104
Query: 86 EVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFENVTKISPAFVLFFDCSEEEMERRLL 145
EVT+KL+Q + ++N KFLIDGFPR EENR AFE + + P VLFFDC EEEM +R+L
Sbjct: 105 EVTVKLIQKELESSDNRKFLIDGFPRTEENRVAFERIIRADPDVVLFFDCPEEEMVKRVL 164
Query: 146 GRNQGRVDDNIETIRKRFKVFVESSLPVIEHYNAKNKVKKIDAAKPISEVFEDVKAIFAP 205
RNQGR+DDNI T++KR K+F + PVI++Y K K+ I+A + ++F+ V IF
Sbjct: 165 NRNQGRIDDNITTMKKRLKIFNALNRPVIDYYKNKGKLYTINAVGTVDDIFQHVLPIFNS 224
Query: 206 YAKVE 210
+ +++
Sbjct: 225 FEQLK 229
>AT3G60961.1 | chr3:22541319-22552253 FORWARD LENGTH=137
Length = 136
Score = 184 bits (468), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 109/133 (81%), Gaps = 4/133 (3%)
Query: 76 MIKEGKIVPSEVTIKLLQDAMIKN----ENDKFLIDGFPRNEENRAAFENVTKISPAFVL 131
MI EG+IVPSE+T+KLL AM ++ NDKFLIDGFPRNEENR FENV +I PAFVL
Sbjct: 1 MIAEGRIVPSEITVKLLCKAMEESFQVSGNDKFLIDGFPRNEENRIVFENVARIEPAFVL 60
Query: 132 FFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHYNAKNKVKKIDAAKP 191
FFDC EEE+ERR++ RNQGR DDNIETI+KRFKVFVES+LP+I +Y +K K++KI+AAK
Sbjct: 61 FFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVESTLPIISYYQSKGKLRKINAAKS 120
Query: 192 ISEVFEDVKAIFA 204
EVFE V+ +FA
Sbjct: 121 SEEVFEAVRVLFA 133
>AT5G35170.1 | chr5:13419278-13423482 FORWARD LENGTH=589
Length = 588
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 30/205 (14%)
Query: 27 VFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSE 86
V + G P SGKGTQC IV FG H+S GDLLRAE+ SG++ G + + G +VP E
Sbjct: 82 VMISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSSGTDIGKRAKEFMNSGSLVPDE 141
Query: 87 VTIKLLQDAMIKNENDK--FLIDGFPRNEENRAAFENVTKISPAFVLFFDCSEEEMERRL 144
+ I ++ + + + + +L+DGFPR+ + + + + P + D +E + R
Sbjct: 142 IVIAMVAGRLSREDAKEHGWLLDGFPRSFAQAQSLDKLN-VKPDIFILLDVPDEILIDRC 200
Query: 145 LGRNQG-------------------------RVDDNIETIRKRFKVFVESSLPVIEHYNA 179
+GR R DD E ++ R +++ ++S +I Y+
Sbjct: 201 VGRRLDPVTGKIYHIKNYPPESDEIKARLVTRPDDTEEKVKARLQIYKQNSEAIISAYS- 259
Query: 180 KNKVKKIDAAKPISEVFEDVKAIFA 204
+ + KIDA +P VFE+ + + +
Sbjct: 260 -DVMVKIDANRPKEVVFEETQTLLS 283
>AT5G47840.1 | chr5:19375488-19378058 FORWARD LENGTH=284
Length = 283
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 27 VFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSE 86
+ + G P SGKGTQC I +G H+SAGDLLRAEI SGSENG + +++G++VP E
Sbjct: 67 IMISGAPASGKGTQCELITHKYGLVHISAGDLLRAEIASGSENGRRAKEHMEKGQLVPDE 126
Query: 87 VTIKLLQDAMIKNENDK--FLIDGFPRNEENRAAFENVTKISPAFVLFFDCSEEEMERRL 144
+ + +++D + + ++++ +L+DG+PR+ A + P + + EE + R+
Sbjct: 127 IVVMMVKDRLSQTDSEQKGWLLDGYPRSASQATALKGFG-FQPDLFIVLEVPEEILIERV 185
Query: 145 LGR 147
+GR
Sbjct: 186 VGR 188
>AT5G63400.1 | chr5:25393274-25394817 REVERSE LENGTH=247
Length = 246
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 33/211 (15%)
Query: 27 VFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSE 86
+ +G PGSGKGTQ + + + HLS GD+LRA + S + G + +++G++V +
Sbjct: 36 LIFIGPPGSGKGTQSPVVKDEYCLCHLSTGDMLRAAVASKTPLGVKAKEAMEKGELVSDD 95
Query: 87 VTIKLLQDAMIKNENDK-FLIDGFPRNEENRAAFENVTK---ISPAFVLFFDCSEEEMER 142
+ + ++ +AM K + K F++DGFPR + + K VL F + +E
Sbjct: 96 LVVGIIDEAMNKPKCQKGFILDGFPRTVTQAEKLDEMLKRRGTEIDKVLNFAIDDAILEE 155
Query: 143 RLLGR----NQGRV-------------------------DDNIETIRKRFKVFVESSLPV 173
R+ GR + GR DDN + ++ R F + PV
Sbjct: 156 RITGRWIHPSSGRSYHTKFAPPKTPGVDDITGEPLIQRKDDNADVLKSRLAAFHSQTQPV 215
Query: 174 IEHYNAKNKVKKIDAAKPISEVFEDVKAIFA 204
I++Y K + I A K EV +VK +
Sbjct: 216 IDYYAKKAVLTNIQAEKAPQEVTSEVKKALS 246
>AT5G50370.1 | chr5:20509382-20510631 REVERSE LENGTH=249
Length = 248
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 26 VVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPS 85
+VF+ G PGSGKGTQ I + F HLS GD+LRA + + + G + + +G++V
Sbjct: 37 LVFI-GPPGSGKGTQSPVIKDEFCLCHLSTGDMLRAAVAAKTPLGVKAKEAMDKGELVSD 95
Query: 86 EVTIKLLQDAMIKNENDK-FLIDGFPRNEENRAAFENVTKISPAF---VLFFDCSEEEME 141
++ + ++ +AM + + K F++DGFPR + + A VL F + +E
Sbjct: 96 DLVVGIMDEAMNRPKCQKGFILDGFPRTVTQAEKLDEMLNRRGAQIDKVLNFAIDDSVLE 155
Query: 142 RRLLGR----NQGRV-------------------------DDNIETIRKRFKVFVESSLP 172
R+ GR + GR DDN + +R R F + + P
Sbjct: 156 ERITGRWIHPSSGRSYHTKFAPPKVPGVDDLTGEPLIQRKDDNADVLRSRLDAFHKQTQP 215
Query: 173 VIEHYNAKNKVKKIDAAK 190
VI++Y K + I A K
Sbjct: 216 VIDYYAKKENLVNIPAEK 233
>AT2G37250.1 | chr2:15641991-15643318 FORWARD LENGTH=285
Length = 284
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 46/219 (21%)
Query: 21 DKKVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEG 80
D+ V VF LG PG GKGT + + G H++ GDL+R E+ S + ++ +G
Sbjct: 49 DRNVQWVF-LGCPGVGKGTYASRLSTLLGVPHIATGDLVREELASSGPLSQKLSEIVNQG 107
Query: 81 KIVPSEVTIKLLQDAMIKNE---NDKFLIDGFPRNEENRAAFENVTKISPAFVLFFDCSE 137
K+V E+ + LL + E F++DGFPR +VT I V+ E
Sbjct: 108 KLVSDEIIVDLLSKRLEAGEARGESGFILDGFPRTMRQAEILGDVTDID--LVVNLKLPE 165
Query: 138 EEMERRLLGRNQ----------------------------------------GRVDDNIE 157
E + + LGR R DD E
Sbjct: 166 EVLVDKCLGRRTCSQCGKGFNVAHINLKGENGRPGISMDPLLPPHQCMSKLVTRADDTEE 225
Query: 158 TIRKRFKVFVESSLPVIEHYNAKNKVKKIDAAKPISEVF 196
++ R +++ E+S P+ E+Y K K+ + D I E +
Sbjct: 226 VVKARLRIYNETSQPLEEYYRTKGKLMEFDLPGGIPESW 264
>AT2G39270.1 | chr2:16399983-16401408 FORWARD LENGTH=296
Length = 295
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 45/210 (21%)
Query: 30 LGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSEVTI 89
LG PG GKGT + + G H++ GDL+R E+ S + ++ ++ GK+VP E I
Sbjct: 70 LGCPGVGKGTYASRLSSLLGVPHIATGDLVREELSSSGLLSSQLKELVNHGKLVPDEFII 129
Query: 90 KLLQDAMIKNEN---DKFLIDGFPRNEENRAAFENVTKISPAFVLFFDCSEEEMERRLLG 146
LL + ++ +++DGFPR E VT I V+ EE + + LG
Sbjct: 130 SLLSKRLQAGKDKGESGYILDGFPRTVTQAEILEGVTNID--LVINLKLREEALLAKCLG 187
Query: 147 RN----------------------------------------QGRVDDNIETIRKRFKVF 166
R R DD E +++R +++
Sbjct: 188 RRICSECGGNYNVACIDIKGDDDTPRMYMPPLLPPPNCESKLISRADDTEEVVKERLRIY 247
Query: 167 VESSLPVIEHYNAKNKVKKIDAAKPISEVF 196
+ + PV E Y + K+ + + I E +
Sbjct: 248 NKMTQPVEEFYKKRGKLLEFELPGGIPESW 277
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,333,851
Number of extensions: 188998
Number of successful extensions: 616
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 607
Number of HSP's successfully gapped: 10
Length of query: 210
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 116
Effective length of database: 8,529,465
Effective search space: 989417940
Effective search space used: 989417940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)