BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0621300 Os07g0621300|AK071567
(149 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22475.1 | chr2:9541523-9544778 FORWARD LENGTH=300 197 1e-51
AT1G28200.1 | chr1:9850395-9852300 REVERSE LENGTH=260 187 3e-48
AT4G40100.1 | chr4:18583244-18584524 FORWARD LENGTH=226 155 7e-39
AT5G13200.1 | chr5:4207081-4208079 FORWARD LENGTH=273 145 8e-36
AT5G23360.1 | chr5:7861817-7862449 FORWARD LENGTH=211 121 1e-28
AT5G23350.1 | chr5:7858545-7859387 REVERSE LENGTH=281 120 3e-28
AT5G23370.1 | chr5:7863542-7864201 REVERSE LENGTH=220 118 1e-27
AT4G01600.1 | chr4:693210-694319 FORWARD LENGTH=234 116 4e-27
AT5G08350.1 | chr5:2686417-2687175 REVERSE LENGTH=223 111 1e-25
>AT2G22475.1 | chr2:9541523-9544778 FORWARD LENGTH=300
Length = 299
Score = 197 bits (502), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 117/138 (84%), Gaps = 1/138 (0%)
Query: 1 MGRIAQISKVIAEGGYDKVFHQTFECLPDEKLKKAYACYLSTSHGPIMGVLYISTAKIAF 60
MGRIAQ +KV AEGGY+K+F QTFE P+E+L ++ACYLSTS GP+MGVLYIS+AK+A+
Sbjct: 158 MGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAY 217
Query: 61 CSDSPVAYVTEDNKNQSSIYKVVVPVAQLRSVTPTASQQNPAERYIQVVSVDNHDFWFMG 120
CSD+P++Y D + + S YKVV+P+ QL++V P+AS NPAE+YIQV+SVDNH+FWFMG
Sbjct: 218 CSDNPLSYKNGD-QTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMG 276
Query: 121 FVNYDGAVKSLQEAVRGG 138
F+NYDGAV SLQ++++ G
Sbjct: 277 FLNYDGAVTSLQDSLQAG 294
>AT1G28200.1 | chr1:9850395-9852300 REVERSE LENGTH=260
Length = 259
Score = 187 bits (474), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 112/136 (82%), Gaps = 1/136 (0%)
Query: 1 MGRIAQISKVIAEGGYDKVFHQTFECLPDEKLKKAYACYLSTSHGPIMGVLYISTAKIAF 60
+ RIAQ +K++AEGGY+KVF QTF+CLPDEKL K YACYLSTS GP++GV+Y+ST K+AF
Sbjct: 121 VSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAF 180
Query: 61 CSDSPVAYVTEDNKNQSSIYKVVVPVAQLRSVTPTASQQNPAERYIQVVSVDNHDFWFMG 120
SD+P++Y E + S YKVV+P QL++V P+ S+ N +++YIQV+S+DNH+FWFMG
Sbjct: 181 SSDNPLSY-KEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMG 239
Query: 121 FVNYDGAVKSLQEAVR 136
FV Y+ AVKSLQEAV+
Sbjct: 240 FVTYESAVKSLQEAVQ 255
>AT4G40100.1 | chr4:18583244-18584524 FORWARD LENGTH=226
Length = 225
Score = 155 bits (393), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 29/138 (21%)
Query: 1 MGRIAQISKVIAEGGYDKVFHQTFECLPDEKLKKAYACYLSTSHGPIMGVLYISTAKIAF 60
MGRIAQ +KV+AEGGY+K+F QTFE +P+E+L+ ++ACYLSTS GP+MGVLY
Sbjct: 111 MGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLY-------- 162
Query: 61 CSDSPVAYVTEDNKNQSSIYKVVVPVAQLRSVTPTASQQNPAERYIQVVSVDNHDFWFMG 120
VV+P+ QL+SV P+ S NPAE+YIQV+SVD+H+FWFMG
Sbjct: 163 ---------------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMG 201
Query: 121 FVNYDGAVKSLQEAVRGG 138
F+NY+GAV SLQ+ ++ G
Sbjct: 202 FLNYEGAVTSLQDTLQAG 219
>AT5G13200.1 | chr5:4207081-4208079 FORWARD LENGTH=273
Length = 272
Score = 145 bits (366), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 90/134 (67%)
Query: 2 GRIAQISKVIAEGGYDKVFHQTFECLPDEKLKKAYACYLSTSHGPIMGVLYISTAKIAFC 61
G++ +K I +GG++ +F Q F P+E LKK +ACYLST+ GP+ G +Y+S A++AFC
Sbjct: 127 GKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFC 186
Query: 62 SDSPVAYVTEDNKNQSSIYKVVVPVAQLRSVTPTASQQNPAERYIQVVSVDNHDFWFMGF 121
SD P+ + + S Y+VVVP+A + +V P ++ P E+YIQ+ +VD HDFWFMGF
Sbjct: 187 SDRPLYFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGF 246
Query: 122 VNYDGAVKSLQEAV 135
VNY+ A L +V
Sbjct: 247 VNYEKATHHLLTSV 260
>AT5G23360.1 | chr5:7861817-7862449 FORWARD LENGTH=211
Length = 210
Score = 121 bits (303), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 85/128 (66%)
Query: 8 SKVIAEGGYDKVFHQTFECLPDEKLKKAYACYLSTSHGPIMGVLYISTAKIAFCSDSPVA 67
+K++ GG +K++ + F+ EKL KAY CYLST+ G I G+L+IS+ KIAFCS+ +
Sbjct: 78 AKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIK 137
Query: 68 YVTEDNKNQSSIYKVVVPVAQLRSVTPTASQQNPAERYIQVVSVDNHDFWFMGFVNYDGA 127
+ YKV +P+ ++ V + + + P++RY++VV+VDN+DFWFMGFV+Y A
Sbjct: 138 VTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKA 197
Query: 128 VKSLQEAV 135
L++A+
Sbjct: 198 FNCLEKAL 205
>AT5G23350.1 | chr5:7858545-7859387 REVERSE LENGTH=281
Length = 280
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 85/128 (66%)
Query: 8 SKVIAEGGYDKVFHQTFECLPDEKLKKAYACYLSTSHGPIMGVLYISTAKIAFCSDSPVA 67
+K++ GG +K++ + F+ EKL KAY CYLST+ GPI G+L+IS+ KIAFCS+ +
Sbjct: 148 AKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIK 207
Query: 68 YVTEDNKNQSSIYKVVVPVAQLRSVTPTASQQNPAERYIQVVSVDNHDFWFMGFVNYDGA 127
+ YKV +P+ ++ V + + + P+++Y+++V++DN DFWFMGFV+Y A
Sbjct: 208 VASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKA 267
Query: 128 VKSLQEAV 135
L++A+
Sbjct: 268 FNCLEKAL 275
>AT5G23370.1 | chr5:7863542-7864201 REVERSE LENGTH=220
Length = 219
Score = 118 bits (295), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 85/128 (66%)
Query: 8 SKVIAEGGYDKVFHQTFECLPDEKLKKAYACYLSTSHGPIMGVLYISTAKIAFCSDSPVA 67
++++ GG +K++ + F+ +EKL KAY CYLST+ GPI G+L+IS+ KIAFCS+ +
Sbjct: 86 ARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIK 145
Query: 68 YVTEDNKNQSSIYKVVVPVAQLRSVTPTASQQNPAERYIQVVSVDNHDFWFMGFVNYDGA 127
+ + YKV +P+ ++ V + + P+++Y++VV+VD DFWFMGF++Y A
Sbjct: 146 VASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKA 205
Query: 128 VKSLQEAV 135
L++A+
Sbjct: 206 FNCLEQAL 213
>AT4G01600.1 | chr4:693210-694319 FORWARD LENGTH=234
Length = 233
Score = 116 bits (291), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
Query: 1 MGRIAQISKVIAEGGYDKVFHQTFECLPDEKLKKAYACYLSTSHGPIMGVLYISTAKIAF 60
M R++Q +K+I EGG ++VF + F L EKL ++ CY+ST+ GP+ GV+YIS +IAF
Sbjct: 89 MARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAF 148
Query: 61 CSDSPVAYVTEDNKNQ-SSIYKVVVPVAQLRSVTPTASQQNPAERYIQVVSVDNHDFWFM 119
CSD + + N ++ YKVV+ ++ S++ + + P+ERY+ +V+ D +FWFM
Sbjct: 149 CSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFM 208
Query: 120 GFVNYDGAVKSLQEAV 135
GFV+Y A L +A+
Sbjct: 209 GFVSYIDAFNCLNKAL 224
>AT5G08350.1 | chr5:2686417-2687175 REVERSE LENGTH=223
Length = 222
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 82/128 (64%)
Query: 8 SKVIAEGGYDKVFHQTFECLPDEKLKKAYACYLSTSHGPIMGVLYISTAKIAFCSDSPVA 67
++++ GG +K+F + F EKL K Y CYLST+ GPI G+L+IS+ K+AFCS+ +
Sbjct: 85 ARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIK 144
Query: 68 YVTEDNKNQSSIYKVVVPVAQLRSVTPTASQQNPAERYIQVVSVDNHDFWFMGFVNYDGA 127
+ YKV +P+ ++ V + + + P+++Y++VV+VD DFWFMGF++Y A
Sbjct: 145 VDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKA 204
Query: 128 VKSLQEAV 135
L++A+
Sbjct: 205 FNCLEKAL 212
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,141,642
Number of extensions: 113921
Number of successful extensions: 277
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 273
Number of HSP's successfully gapped: 9
Length of query: 149
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 60
Effective length of database: 8,666,545
Effective search space: 519992700
Effective search space used: 519992700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 107 (45.8 bits)