BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0617700 Os07g0617700|Os07g0617700
         (406 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33160.1  | chr4:15994160-15995533 FORWARD LENGTH=458          295   4e-80
AT1G27340.1  | chr1:9495741-9497857 FORWARD LENGTH=468             69   4e-12

>AT4G33160.1 | chr4:15994160-15995533 FORWARD LENGTH=458
          Length = 457

 Score =  295 bits (754), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 159/407 (39%), Positives = 232/407 (57%), Gaps = 36/407 (8%)

Query: 20  LGEMHDDVLERVLARLPPASYFRLRGVCRRWSDAASSPTFLAACGRVPARDPWFLMLSEG 79
           + +++DDVLERVL+ LP + +FR+  VC+RW  + +S +F  AC ++P RDPWF M+   
Sbjct: 67  MDDLNDDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSKSFKLACSQIPTRDPWFFMIDND 126

Query: 80  EGQERRLPAVAFDAGEGEWARCG------GAPGHVMPVVAASGGRVLYRAPDTGELTVAN 133
                   +  FD+ E  W                +PV A+SGG + YR   +G+  + N
Sbjct: 127 SNSS----SFVFDSTENSWKNLNRRDFLHHHRQDFIPV-ASSGGLLCYRCSISGDFLLRN 181

Query: 134 PLTGASRXXXXXXXXXXXXXXXM------YGSSPYRVVLITGDLPDLSMTVFDSSKNAWD 187
           PLTG+SR               +         S Y +V I+G++P+LS  +++S+ ++W 
Sbjct: 182 PLTGSSRDIPSQDNNNNKPLQAVAMTTTTVTPSSYTLVTISGEIPNLSFKIYESNADSWS 241

Query: 188 DAVAL-SRKPDASSPERDAEXXXXXXXXXXDDETVYFLSKSGDVM--ATNMQRSASRQYS 244
               L S K + SS   D +          D  TVYFLSK G+V+  + N+QRS S+QYS
Sbjct: 242 KDQELESVKNNDSSLHDDYDT---------DSGTVYFLSKQGNVVVASNNLQRSPSKQYS 292

Query: 245 SAVTCGDGGEAVAYFLSNSGAVVACELSRRAFAELPRILPVYFEYSIDVVACGGRAYVVV 304
           S +T  D  E V YFLS+ G +VAC+L++R F ELP++LP + EYSID+V C G  YV++
Sbjct: 293 SVITVTDEAEIV-YFLSSYGTIVACDLTKRCFTELPKLLPPFLEYSIDLVECEGTMYVIL 351

Query: 305 LSELLGTASLRLWEFAGG-AWRQVAAMPPAMSHAFHGKKADVNCV-GHGDRVMVCVSSGE 362
           LSE   +ASLR+W       W QV  +PPA+SH  +GKK D+NCV G G++++VC ++  
Sbjct: 352 LSEFFESASLRIWRLDNNREWVQVGMLPPALSHELYGKKGDINCVGGAGNKILVCFNASP 411

Query: 363 AN---GCFMCDVPTNRWEELPPCAGAGGEPMDFVAAFSFEPRMEVTV 406
                  F+ D+    W ELP C    GE +DFV+A SF+PR+E TV
Sbjct: 412 PEVYCRYFVYDLVAEEWNELPKCF-KDGEAVDFVSALSFQPRIEATV 457



>AT1G27340.1 | chr1:9495741-9497857 FORWARD LENGTH=468
          Length = 467

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/392 (20%), Positives = 150/392 (38%), Gaps = 54/392 (13%)

Query: 18  EGLGEMHDDVLERVLARLPPASYFRLRGVCRRWSDAASSPTFLAACGRVPARDPWFLMLS 77
           E   E   D+ E V++RLP A++F+ R VCR+W+    S +F      +P   PWF  ++
Sbjct: 115 EIWQEFPQDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDSFSRCFTELPQTIPWFYTIT 174

Query: 78  EGEGQERRLPAVAFDAGEGEWAR--CGGAPGH--VMPVVAASGGRVLYRAPDTGELTVAN 133
                E       +D    +W        P    V+P +A++GG V +         V+N
Sbjct: 175 ----HENVNSGQVYDPSLKKWHHPIIPALPKKSIVLP-MASAGGLVCFLDIGHRNFYVSN 229

Query: 134 PLTGASRXXXXXXXXXXXXXXXMYGSSPYRVVLITGDLPDLSMTVFDSSKNAWDDAVALS 193
           PLT + R                             +LP  S  V+         AV ++
Sbjct: 230 PLTKSFR-----------------------------ELPARSFKVWSRV------AVGMT 254

Query: 194 RKPDASSPERDAEXXXXXXXXXXDDETVYFLSKSGDVMATNMQRSASRQYSSAVTCGDGG 253
              +++S                 D      +K G +  +N++      + S        
Sbjct: 255 LNGNSTSHGYKVLWVGCEGEYEVYDSLSNVWTKRGTI-PSNIKLPVLLNFKSQPVAIHS- 312

Query: 254 EAVAYFLSNSGAVVACELSRRAFAELPRILPVYFEYSIDVVA-CGGRAYVVVLSELLGTA 312
             + + L++   +++ ++    + +   I+P   + S   +A CG R  +V L       
Sbjct: 313 -TLYFMLTDPEGILSYDMVSGKWKQF--IIPGPPDLSDHTLAACGERLMLVGLLTKNAAT 369

Query: 313 SLRLWEFAGGA--WRQVAAMPPAMSHAFHGKKADVNCVGH-GDRVMVCVSSGEANGCFMC 369
            + +WE       W++V  MP      F+GK   +NC+G+ G  +++ + S + N     
Sbjct: 370 CVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHIRMNCLGNKGCLILLSLRSRQMNRLITY 429

Query: 370 DVPTNRWEELPPCAGAGGEPMDFVAA-FSFEP 400
           +  T  W ++P C    G    ++A   +F P
Sbjct: 430 NAVTREWTKVPGCTVPRGRKRLWIACGTAFHP 461



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.134    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,855,508
Number of extensions: 357359
Number of successful extensions: 967
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 958
Number of HSP's successfully gapped: 2
Length of query: 406
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 305
Effective length of database: 8,337,553
Effective search space: 2542953665
Effective search space used: 2542953665
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)