BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0616900 Os07g0616900|AK071047
(462 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G43230.1 | chr3:15207776-15209599 FORWARD LENGTH=486 571 e-163
AT1G29800.1 | chr1:10432736-10435177 FORWARD LENGTH=511 386 e-107
AT4G33240.1 | chr4:16029504-16037278 REVERSE LENGTH=1758 64 2e-10
AT1G20110.1 | chr1:6971554-6974578 FORWARD LENGTH=602 62 6e-10
AT3G14270.1 | chr3:4754624-4761185 FORWARD LENGTH=1792 58 1e-08
AT3G23270.1 | chr3:8316436-8320337 FORWARD LENGTH=1046 57 3e-08
AT1G61690.1 | chr1:22782825-22786782 REVERSE LENGTH=1172 54 1e-07
AT4G14368.1 | chr4:8274279-8278810 REVERSE LENGTH=1107 54 2e-07
AT1G69710.1 | chr1:26222325-26226530 FORWARD LENGTH=1042 53 3e-07
AT5G19420.2 | chr5:6547945-6552981 REVERSE LENGTH=1140 52 6e-07
AT5G12350.1 | chr5:3995789-4000545 FORWARD LENGTH=1076 51 1e-06
AT5G42140.1 | chr5:16837547-16841640 REVERSE LENGTH=1074 51 1e-06
>AT3G43230.1 | chr3:15207776-15209599 FORWARD LENGTH=486
Length = 485
Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust.
Identities = 270/413 (65%), Positives = 327/413 (79%), Gaps = 3/413 (0%)
Query: 48 DFPSEYDSREDPFVPTRASSNINLKTVLTGLAAIVSGTNKNQDNTLQQQSFSTDVSFLGF 107
D E + P + +NLK VLTGL AIV+G NKN L Q++ S++VSFLG
Sbjct: 74 DSSGELSTTTTPPIQGNEKPEVNLKNVLTGLIAIVTGRNKNP---LDQKNPSSNVSFLGS 130
Query: 108 DKDGDVNVHPSVCVPSAPPLLETNALQYSAYREVLQADPPEWLPDSSTSVCLQCSLPFTA 167
+GD VH SV +PSAPPLLE + + YS Y+E+L+A+PPEWLPDS S C+QCS PFTA
Sbjct: 131 GTNGDTFVHSSVYIPSAPPLLEPSGINYSVYKELLEAEPPEWLPDSLASTCMQCSTPFTA 190
Query: 168 LTRGRHHCRFCGGIFCKDCSKGRCLMPMKFRQRDPQRVCDACYDRLDPLQGILINYNSNA 227
+T GRHHCRFCGGIFC++CSKGRCLMP +FR+R+PQRVCD+CY+RLDPLQ +LIN SNA
Sbjct: 191 ITCGRHHCRFCGGIFCRNCSKGRCLMPSRFRERNPQRVCDSCYERLDPLQCVLINSISNA 250
Query: 228 MQPAKHDVMDWTSTRSWLNLPVGLSMEYEIYKATNTLNRYCQVARLNPEKSIPSSILKGA 287
+Q AKHDV+DWT +R WLNLPVGLSME EIYKA NTL YCQVARL+PEKSIP ++L A
Sbjct: 251 VQVAKHDVVDWTCSRGWLNLPVGLSMEDEIYKAANTLRGYCQVARLDPEKSIPHAVLSRA 310
Query: 288 KGLAVITVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAIASVGLGWGVQFGGELTDFIIV 347
KGLA+ITVAKAGA+L+YK+GTGLV++RR DGSWSAPSAI SVGLGWG Q GGEL DFIIV
Sbjct: 311 KGLAIITVAKAGALLSYKLGTGLVISRRPDGSWSAPSAILSVGLGWGAQIGGELMDFIIV 370
Query: 348 LHDRKAVKAFSSRMHXXXXXXXXXXXXPIGRAFEADVRASEKGSGLCYTYSCSKGAFVGV 407
LHD KAVK F SRMH PIGR EAD+RA +KGSG+CYTYS SKGAFVGV
Sbjct: 371 LHDVKAVKTFCSRMHFSLGAGCSAAAGPIGRVLEADLRAGDKGSGVCYTYSRSKGAFVGV 430
Query: 408 SLEGNVVTTRSETNLRFYGDAYLTTTDILFGKVEKPRAAQPLYSALDDLFSKM 460
SLEGN+V TR + N++FYGD YL+T+DIL G V++P+AA+PLY+AL +L++++
Sbjct: 431 SLEGNLVATRRDMNVKFYGDPYLSTSDILLGMVDQPKAAEPLYTALRELYARL 483
>AT1G29800.1 | chr1:10432736-10435177 FORWARD LENGTH=511
Length = 510
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/338 (55%), Positives = 231/338 (68%), Gaps = 4/338 (1%)
Query: 124 APPLLETNALQYSAYREVLQADPPEWLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFC 183
A L E N + RE+L+ +PP+WLPDS+ S C+ CS+ F + RHHCR+CGGIFC
Sbjct: 160 AHTLTEAN---FGNAREILETEPPKWLPDSAASACMLCSVRFHPIMCSRHHCRYCGGIFC 216
Query: 184 KDCSKGRCLMPMKFRQRDPQRVCDACYDRLDPLQGILINYNSNAMQPAKHDVMDWTSTRS 243
+DCSKG+ L+P+KFR DPQRVCD C+ RL+ +Q L++ S A Q HD+ D ++ RS
Sbjct: 217 RDCSKGKSLVPVKFRVSDPQRVCDVCFVRLESVQPYLMDQVSPAAQLPTHDLTDLSTLRS 276
Query: 244 WLNLPVGLSMEYEIYKATNTLNRYC-QVARLNPEKSIPSSILKGAKGLAVITVAKAGAVL 302
W+N P G SMEYEIYKATNTL Y +V E+SIP +IL+ AKGLAVITVA+ G ++
Sbjct: 277 WVNFPWGQSMEYEIYKATNTLRGYITKVGSSRTERSIPDAILRQAKGLAVITVARVGVMV 336
Query: 303 TYKVGTGLVVARRSDGSWSAPSAIASVGLGWGVQFGGELTDFIIVLHDRKAVKAFSSRMH 362
TYK+GTGLVVARR DGSWS PSAI+S GLGWG Q GGE DFIIVL R+A++ F S H
Sbjct: 337 TYKIGTGLVVARRDDGSWSPPSAISSFGLGWGAQAGGEFIDFIIVLRTREAIQTFGSNTH 396
Query: 363 XXXXXXXXXXXXPIGRAFEADVRASEKGSGLCYTYSCSKGAFVGVSLEGNVVTTRSETNL 422
GRA EAD+RA G CYTYSCSKGAFVG SLEG++ TTR+ N
Sbjct: 397 LVVGAGLSAAVGVTGRAVEADIRAGSGGYAACYTYSCSKGAFVGCSLEGSIFTTRTSENS 456
Query: 423 RFYGDAYLTTTDILFGKVEKPRAAQPLYSALDDLFSKM 460
RFYG L +DIL G + +P AA LY AL DL+ KM
Sbjct: 457 RFYGSQSLAASDILLGSLPRPPAAAALYRALGDLYQKM 494
>AT4G33240.1 | chr4:16029504-16037278 REVERSE LENGTH=1758
Length = 1757
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 149 WLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCLMP---MKFRQRDPQ-- 203
W+PD S VC +C FT R RHHCR CG +FC C+ P K +P+
Sbjct: 33 WMPDQSCPVCYECDAQFTVFNR-RHHCRLCGRVFCAKCAANSIPSPSDETKDSHEEPERI 91
Query: 204 RVCDACYDRLDPLQGIL 220
RVC+ CY + + QGI+
Sbjct: 92 RVCNYCYKQWE--QGIV 106
>AT1G20110.1 | chr1:6971554-6974578 FORWARD LENGTH=602
Length = 601
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 148 EWLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCLMPMKFRQRDPQ-RVC 206
W+PD + S C C F A R RHHCR CG +FC C++GR + + PQ RVC
Sbjct: 451 HWVPDEAVSKCTSCGSDFGAFIR-RHHCRNCGDVFCDKCTQGR--IALTAEDNAPQVRVC 507
Query: 207 DAC 209
D C
Sbjct: 508 DRC 510
>AT3G14270.1 | chr3:4754624-4761185 FORWARD LENGTH=1792
Length = 1791
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 149 WLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRC-LMPMKFR--QRDPQ-- 203
W+PD S VC +C FT + R RHHCR CG +FC C+ P R + D +
Sbjct: 36 WMPDQSCRVCYECDCQFTLINR-RHHCRHCGRVFCGKCTANSIPFAPSDLRTPREDWERI 94
Query: 204 RVCDACYDRLDPLQG 218
RVC+ C+ + + G
Sbjct: 95 RVCNYCFRQWEQGDG 109
>AT3G23270.1 | chr3:8316436-8320337 FORWARD LENGTH=1046
Length = 1045
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 148 EWLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCL-MPMKFRQRDPQRVC 206
+W+ + S+C C F TR RH+C CG + C CS + L + P RVC
Sbjct: 595 KWVSGADQSICSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVC 653
Query: 207 DACYDRLDPLQ-GILINYNSNAMQPAK 232
DACY +L + G N N N P +
Sbjct: 654 DACYSKLKAAESGYSSNVNRNVATPGR 680
>AT1G61690.1 | chr1:22782825-22786782 REVERSE LENGTH=1172
Length = 1171
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 149 WLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCLMPMKFRQRDPQRVCDA 208
W+ D+S C CS FT + R +HHCR CGG+FC C++ R + ++ + P R+C+
Sbjct: 18 WVVDASH--CQGCSSQFTFINR-KHHCRRCGGLFCGTCTQQR--LSLRGQGDSPVRICEP 72
Query: 209 C 209
C
Sbjct: 73 C 73
>AT4G14368.1 | chr4:8274279-8278810 REVERSE LENGTH=1107
Length = 1106
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 148 EWLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCL-MPMKFRQRDPQRVC 206
+W+ + SVC C F TR RH+C CG + C CS + L + P RVC
Sbjct: 614 KWVSGADQSVCSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVC 672
Query: 207 DACYDRLDPLQGILINYNSN 226
DACY +L + YNSN
Sbjct: 673 DACYTKLKAGES---GYNSN 689
>AT1G69710.1 | chr1:26222325-26226530 FORWARD LENGTH=1042
Length = 1041
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 148 EWLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCL-MPMKFRQRDPQRVC 206
+W+P S S+C C PF R RH+C CG +FCK CS + L + P RVC
Sbjct: 647 KWVPGSEHSLCAGCRNPFN-FRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVC 705
Query: 207 DACYDRL 213
C+ +L
Sbjct: 706 YGCFTKL 712
>AT5G19420.2 | chr5:6547945-6552981 REVERSE LENGTH=1140
Length = 1139
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 148 EWLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCLMP-MKFRQRDPQRVC 206
+W S+C C PF R RH+C CG +FC CS + L M P RVC
Sbjct: 690 KWASGMDQSMCSGCRQPFN-FKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVC 748
Query: 207 DACYDRL 213
D C+++L
Sbjct: 749 DRCFNKL 755
>AT5G12350.1 | chr5:3995789-4000545 FORWARD LENGTH=1076
Length = 1075
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 149 WLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCLMP-MKFRQRDPQRVCD 207
W S+C C PF+ R RH+C CG +FC C+ + L M P RVCD
Sbjct: 653 WASGMDQSMCSGCRQPFS-FKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCD 711
Query: 208 ACYDRL 213
C+++L
Sbjct: 712 KCFNKL 717
>AT5G42140.1 | chr5:16837547-16841640 REVERSE LENGTH=1074
Length = 1073
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 148 EWLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCL-MPMKFRQRDPQRVC 206
+W+ + S C C F TR RH+C CG + C CS + L + P RVC
Sbjct: 617 KWVSGTEQSQCSACRQAF-GFTRKRHNCYNCGLVHCHSCSSKKSLKAALAPNPGKPYRVC 675
Query: 207 DACYDRLDPLQGILINYNSNAM---QPAKHDVMDWTSTR 242
D+C+ +L + I+ N M D +D T R
Sbjct: 676 DSCHSKLSKVSEANIDSRKNVMPRLSGENKDRLDKTEIR 714
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,244,638
Number of extensions: 437989
Number of successful extensions: 1037
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1033
Number of HSP's successfully gapped: 12
Length of query: 462
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 360
Effective length of database: 8,310,137
Effective search space: 2991649320
Effective search space used: 2991649320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)