BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0616000 Os07g0616000|AK120310
(1365 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14172.1 | chr3:4698860-4704773 REVERSE LENGTH=1271 279 7e-75
AT1G17360.1 | chr1:5947441-5951399 FORWARD LENGTH=1062 231 2e-60
AT1G72410.2 | chr1:27251535-27256246 REVERSE LENGTH=1271 217 4e-56
AT4G27430.1 | chr4:13718817-13722736 FORWARD LENGTH=1059 136 8e-32
AT1G61100.1 | chr1:22508831-22512122 REVERSE LENGTH=809 116 7e-26
AT5G43310.1 | chr5:17379735-17385387 REVERSE LENGTH=1238 108 2e-23
>AT3G14172.1 | chr3:4698860-4704773 REVERSE LENGTH=1271
Length = 1270
Score = 279 bits (714), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 168/385 (43%), Positives = 220/385 (57%), Gaps = 56/385 (14%)
Query: 1 MEPDAPLDFALFQLSPRRSRCELVVSGNGRTERIASGSVKPFVAHLRXXXXXXXXXXXXX 60
M P PLD+A+FQLSP+RSRCEL VS G TE++ASG VKPFVAHL+
Sbjct: 1 MRPAIPLDYAVFQLSPKRSRCELFVSTTGNTEKLASGLVKPFVAHLKVAEEQVSREVQSI 60
Query: 61 XIRLQLDRRAA-WFSKGTLERFVRFVSTPEVLEMANTFDAEMSQLEGARKIYAQXXXXXX 119
+ ++ ++ A WF+KGTLERFVRFVSTPEVLE+ + D EMSQLE ARKIY +
Sbjct: 61 RLEVESNKNAGTWFTKGTLERFVRFVSTPEVLELVSALDVEMSQLEAARKIYGEGTSDQR 120
Query: 120 XXXXXXX----XXDITKKELLRAIDVRLSALKQDLVTACARASSAGFNPDSVSELVLFAD 175
D+TKKELL+AID+RL+A++QDL TAC RAS+AGFNP +VSEL FAD
Sbjct: 121 SSAKDSTDTTPAADVTKKELLKAIDLRLAAVRQDLATACNRASAAGFNPITVSELSQFAD 180
Query: 176 HFGANRLSEACNKFMSLCQRRPDICPHYSVSSTSSQWKSFDDGNVRGSSSSDMSLDETQA 235
FGANRL+EAC KF++LCQRRP++ + V+ ++ +R S SDMS+D+
Sbjct: 181 RFGANRLNEACTKFITLCQRRPELMSSWRVNQ--------EEEAIRSSWESDMSIDDPSE 232
Query: 236 D----------------QGASSNKSIIGGSV----SHIHRSNSQNSVDVPPEPSAVQHPK 275
D Q +S G S S + +S + D E S VQ+ +
Sbjct: 233 DPSRDLATNRNQQHREYQTGMEEQSATGTSYCQHESKLKPQSSHDENDEEEEKSTVQN-E 291
Query: 276 PTIQQSVEKQEKETDALXXXXXXXXXSRRLSVQDRINMFESKQKEQTSSSGNSAACTSKV 335
P + Q + +RRLSVQ+RI+MFE+KQKE +SG A +K
Sbjct: 292 PLVSQPRQ-----------------LTRRLSVQERISMFENKQKE---NSGEKTAV-AKS 330
Query: 336 VPTKGEHRRVPSGASMDK-LVRRWS 359
K + S A M+K +VRRWS
Sbjct: 331 TELKRLSSDLSSSAGMEKVVVRRWS 355
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/274 (40%), Positives = 158/274 (57%), Gaps = 21/274 (7%)
Query: 1098 DEEYESIEENLRESDFPADSDSEN--PGISHEFGNSDDPGSENG------DVSFPSDAPT 1149
D E E + E L +++ A +D+EN P +S E G NG D ++ P
Sbjct: 1005 DMEKEGMGEALDDTEVEAFTDAENEMPRLSQESEEWGSTGVANGESFSQLDAGSNTELPA 1064
Query: 1150 LGGSKFNAFAGNMHDTPGEVPASWSTRPHLFAYANDNSDGDAFADSPNGSPSPWNSHTLD 1209
S+ G++ D+PGE + W++R Y N+ S+ DA DSP GSP+ WN +L+
Sbjct: 1065 AMASRHQTM-GSILDSPGESTSPWNSRVK-HRYPNEASELDASVDSPVGSPAFWNFSSLN 1122
Query: 1210 QITDADVSRMRKKWGSAQMPFVGPNASQ-QPRKDVXXXXXXXXXXXXXXXGADGLNDWVS 1268
T++D ++MRKKWG+AQ G N SQ Q ++DV A+ L DW+S
Sbjct: 1123 H-TESDTTQMRKKWGAAQKRAAGGNPSQNQCQQDVTKGLKRLLNFGRKNRAAESLADWIS 1181
Query: 1269 ASTASECDDDMEDGRDLAMGSSDDFRKSRMGYPSAY---DGFVDTDVFAEQDQSLRSSIP 1325
A+T SE DDD +DGRDLA SS+D RKSRMG+ ++ D F ++++F E Q+
Sbjct: 1182 ATT-SEGDDDTDDGRDLANRSSEDLRKSRMGFLQSHPSGDSFNESELFTEHVQTT----- 1235
Query: 1326 NPPANFRLREDQLTGSSLKAPRSFFSLSTFRSKG 1359
P +F+L+EDQ TG+S+KAPRSFFSLS FRSKG
Sbjct: 1236 GTPLSFKLKEDQTTGASVKAPRSFFSLSNFRSKG 1269
Score = 146 bits (369), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 161/308 (52%), Gaps = 31/308 (10%)
Query: 689 PLEQTKR--PTKGSQDRHDELQKKANELEKLFAAQKL-------TSSRRGK-------ST 732
P EQ +R P+KGSQ+ +DEL+ KANELEKLFA L +S RRGK +
Sbjct: 623 PTEQVQRARPSKGSQELNDELKVKANELEKLFAEHMLRVPGDQSSSVRRGKPGKPSEQAV 682
Query: 733 DVQVENTPRVNEVKPPLVLPERIYTKQIVKESITNEFDANELLKMVDTEGYNNNVPQSI- 791
Q+ P ++ + ++ + + ++F +KMV T+ Y + Q+
Sbjct: 683 TSQLRR-PVAQDLSSVQISDQKTLAMPTLTSNDEDKFKTPPTMKMVVTKDYGDTTRQNFP 741
Query: 792 -ISL-EESRGKFYDQYMQKRDAKLKEDWKLQGEQKEATIKAMRDSLERSNAEMRAKFSRS 849
IS + SRGKFY+QYMQKRDAKLKEDW + +KEA +K M+D L+RSNAEM+ KFS+S
Sbjct: 742 EISFSDNSRGKFYEQYMQKRDAKLKEDWSCRRTEKEAKLKVMQDILDRSNAEMKTKFSQS 801
Query: 850 SSVPDSTYISRCAHKFPPLQSVIK-DKDQG-IDSFLVEEEMNSDYLXXXXXXXXXXXXKH 907
+ DS+ +R A K S + KDQ I SF EE+ +
Sbjct: 802 TGRRDSS--ARRAEKLVYFNSKLSAKKDQHPISSFQSEEDEDGSRSTQNKKLQQNKNNLL 859
Query: 908 FSNKVACNQKKSIAPVHRHSSRTVSSGYANRRNLPDNPLAQSVPNFADLRKENTKPSAGL 967
+ A + +S A V S+ RR + AQSVPNF++++KE KP++G+
Sbjct: 860 IARTTATSASRSAAKVSTLSA-------VRRRGQSEKHFAQSVPNFSEIKKEGMKPASGV 912
Query: 968 SRAAPRTQ 975
+ RTQ
Sbjct: 913 GKNGVRTQ 920
>AT1G17360.1 | chr1:5947441-5951399 FORWARD LENGTH=1062
Length = 1061
Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 206/398 (51%), Gaps = 74/398 (18%)
Query: 1 MEPDAPLDFALFQLSPRRSRCELVVSGNGRTERIASGSVKPFVAHLRXXXXXXXXXXXXX 60
M+ D LD+A+F+LSP+ SRCEL VS N E++ASG ++PFV HLR
Sbjct: 1 MKADTVLDYAVFELSPKYSRCELFVSSNEEREKLASGLIEPFVNHLRVIESQASKRDQSS 60
Query: 61 XIRLQLDRRA---AWFSKGTLERFVRFVSTPEVLEMANTFDAEMSQLEGARKIYAQXXXX 117
+RL++++ +WF++ TLERFV++V++PEVLE NTFD EMSQLE AR +Y+Q
Sbjct: 61 -VRLEVEQSENGESWFTRRTLERFVQYVNSPEVLERVNTFDLEMSQLEAARTLYSQDDGG 119
Query: 118 XXXXXXXXXXXDITKKELLRAIDVRLSALKQDLVTACARASSAGFNPDSVSELVLFADHF 177
D T+KEL+RAID+RL A+K+DL TA A AS+ GF+P +VS+L FAD F
Sbjct: 120 VA---------DATQKELVRAIDLRLEAIKKDLTTAIAHASANGFDPQTVSDLQRFADRF 170
Query: 178 GANRLSEACNKFMSLCQRRPDICPHYSVSSTSSQWKSFDDGNVRGSSSSDMSLDETQADQ 237
GA+ L+EAC+K++SL QRRPD+ NV ++++ S+DET Q
Sbjct: 171 GAHHLNEACSKYISLSQRRPDLITK----------------NV--NTNTRTSVDETNISQ 212
Query: 238 GASSNKSIIGGSVSHIHRSNSQNSVDVPPEPSAVQHPKPTIQQSVEKQEKETDALXXXXX 297
S+ N S+D + H
Sbjct: 213 QLSTKND---------KEENKDESLDESSTVKPIHH------------------------ 239
Query: 298 XXXXSRRLSVQDRINMFESKQKEQTSSSGNSAACTSKVV----PTKGEHRRVPSGASMDK 353
+RRLSVQDRIN+FESKQKE ++S+GN +K P+ VP+
Sbjct: 240 ----TRRLSVQDRINLFESKQKENSNSAGNKPVVVAKSTELKRPSSDTSSTVPAFPEK-S 294
Query: 354 LVRRWSNVXXXXXXXXXXXXXXXXEKREIGTPVGTPTS 391
++RRWS V E G P+ TP+S
Sbjct: 295 VLRRWSIVSDMSFDFTMENKKSDSGSNEEG-PLSTPSS 331
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 112/224 (50%), Gaps = 43/224 (19%)
Query: 1147 APTLGGSKFNAFAGNMHDTPGEVPASWSTR-PHLFAYANDNSDGDA-FADSPNGSPSPWN 1204
A TL S ++ D+P E P SWS+ H F+Y +++SD DA DSP GSP+ W+
Sbjct: 876 ANTLPSSTLQHNVASLFDSPSESPLSWSSNLQHAFSYPHEHSDVDASVDDSPMGSPASWS 935
Query: 1205 SHTLDQITDADVSRMRKKWGS-AQMPFVGPNASQQPRKDVXXXXXXXXXXXXXXXGADGL 1263
S RMRKKWG+ AQ P + PN+ RKD+ AD L
Sbjct: 936 S------------RMRKKWGTTAQSPVIVPNS----RKDLTKGIKRFLKFGKKTRAADSL 979
Query: 1264 NDWVSASTASECDDDMEDGRDLAMGSSDDFRKSRMGYPSAYDGFVDTDVFAEQDQSLRSS 1323
DWVS +T SE DDD A SSD+ RKSRM + +E +Q+ +
Sbjct: 980 MDWVSVTT-SEGDDD------CAYRSSDELRKSRMASSQSQ--------LSEDEQASNNM 1024
Query: 1324 IP--NPPANFRLREDQLTGSSLKAPRSFFSLSTFRSKGGDARLR 1365
I + A+F++++ RSFFSLSTFRSKG D++ R
Sbjct: 1025 IQPHHHQASFKVKDGDFK-------RSFFSLSTFRSKGNDSKPR 1061
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 11/182 (6%)
Query: 795 EESRGKFYDQYMQKRDAKLKEDWKLQGEQKEATIKAMRDSLERSNAEMRAKFSRSS-SVP 853
++S+GK Y++YM+KRDAKL+E+W KE+ +K+M+++L++S EM+AKFS +S
Sbjct: 549 DDSKGKLYEEYMKKRDAKLREEW----SSKESKLKSMQEALDQSRTEMKAKFSAASMKRQ 604
Query: 854 DSTYISRC-AHKFPPLQSVIKDK--DQGIDSFLVEEEMNSDYLXXXXXXXXXXXXKHFSN 910
DS +R A KF S K I S EEE D L
Sbjct: 605 DSISSTRQRAEKFRSFNSRTSSKKYQHPISSLQSEEENEKDKLVSGQSIGKGASKSSQVR 664
Query: 911 KVACNQKKSIA--PVHRHSSRTVSSGYANRRNLPDNPLAQ-SVPNFADLRKENTKPSAGL 967
KV S P + S+ ++ R+ + Q S+P F+DL+KENTKPS+
Sbjct: 665 KVPSPNGSSRVSKPSGKVSNTNTNTSGRGRKTSEIKLVTQSSLPKFSDLKKENTKPSSLA 724
Query: 968 SR 969
R
Sbjct: 725 GR 726
>AT1G72410.2 | chr1:27251535-27256246 REVERSE LENGTH=1271
Length = 1270
Score = 217 bits (552), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/365 (37%), Positives = 196/365 (53%), Gaps = 44/365 (12%)
Query: 1 MEPDAPLDFALFQLSPRRSRCELVVSGNGRTERIASGSVKPFVAHLRXXXXXXXXXXXXX 60
M D LD+ +F+LSP+ S+CEL VS N +TE++ASG ++PFV HL+
Sbjct: 1 MRSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASGLIQPFVNHLKVLEAKASPVAQSS 60
Query: 61 XIRLQLDRRAAWFSKGTLERFVRFVSTPEVLEMANTFDAEMSQLEGARKIYAQXXXXXX- 119
IRL++++ WF+K TLERFV+FV++PE LE NT+ +EM QLE AR +Y+Q
Sbjct: 61 -IRLEVEKSNTWFTKRTLERFVQFVNSPETLEKVNTYYSEMLQLEAARTLYSQRSEDSKF 119
Query: 120 XXXXXXXXXDITKKELLRAIDVRLSALKQDLVTACARASSAGFNPDSVSELVLFADHFGA 179
D TKKELL+AID+RL A+K+DL T+ + AS++GF+P +VSEL FAD F A
Sbjct: 120 GASDDGAAADATKKELLKAIDLRLEAIKKDLTTSISHASASGFDPHTVSELKQFADRFSA 179
Query: 180 NRLSEACNKFMSLCQRRPDICP-HYSVSSTSSQWKSFDDGNVRGSSSSDMSLDETQADQG 238
+ L EAC+K++SL ++RPD+ YS + G + + D T+ Q
Sbjct: 180 HHLDEACSKYISLWKQRPDLIDMKYS-------------NQLAGVDNVSLQKDSTRQKQN 226
Query: 239 ASSNKSIIGGSVSHIHRSNSQNSVDVPPEPSAVQHPKPTIQQSVEKQEKETDALXXXXXX 298
A + S I + + + T + EK + D
Sbjct: 227 A------VNESEHQIQQCATTS----------------TKRNEEEKTDDSLDVTSSTVKT 264
Query: 299 XXXSRRLSVQDRINMFESKQKEQTSSSGNSAACTSKVVPTKGEHRRVPSGASMDK--LVR 356
+RRLSVQDRIN+FE+KQKE + S G+ +K E RR+ S S + ++R
Sbjct: 265 TQHTRRLSVQDRINLFENKQKENSPSGGSKPVAVTKST----ELRRLSSDVSSSEKPILR 320
Query: 357 RWSNV 361
R S V
Sbjct: 321 RSSIV 325
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 115/233 (49%), Gaps = 38/233 (16%)
Query: 1121 NPGISHEFGNSDDPGSENGDVSFPSDAPTLGGSKFNAFAGNMHDTPGEVPASWSTR-PHL 1179
NP +S + D G EN P+ PT ++ D+PGE P SW+ H
Sbjct: 941 NPMLSEAYEKVDHSGEENCSF-LPATVPT-------TLLASLMDSPGESPLSWNANLQHS 992
Query: 1180 FAYANDNS-DGDAFADSPNGSPSPWNSHTLDQITDADVSRMRKKWGSAQMPFV---GPNA 1235
F+Y +++S D DA DSP GSP+ W+S RMRKKWG+AQ P N
Sbjct: 993 FSYPHEHSSDVDASVDSPTGSPASWSS------------RMRKKWGTAQTPVTVAAANNM 1040
Query: 1236 SQ-QPRKDVXXXXXXXXXXXXXXXGADGLN-DWVSASTASECDDDMEDGRDLAMGSSDDF 1293
SQ Q +KD+ GA+ L DWVS +T SE DD++ED RD A SS+D
Sbjct: 1041 SQYQSKKDLSKGFKRLLKFGRKSRGAESLMMDWVSVTT-SEGDDEVEDRRDFADRSSEDL 1099
Query: 1294 RKSRMGYPSAYDGFVDTDVFAEQDQSLRSSIPNPPANFRLRED-QLTGSSLKA 1345
RKSRMG + + D F E S P +N L++D Q++GS+ K
Sbjct: 1100 RKSRMG---SLQNHLSEDGFNE------SEFPEQASNTELKDDHQMSGSNFKV 1143
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 21/197 (10%)
Query: 795 EESRGKFYDQYMQKRDAKLKEDWKLQGEQKEATIKAMRDSLERSNAEMRAKFSRSSSVPD 854
++S+GKFY++YM+KRDAKL+E+W L+ +KE +K+M+++LE+S EM+AK S SSS
Sbjct: 655 DDSKGKFYEKYMKKRDAKLREEWSLKKGEKETKLKSMQEALEQSRTEMKAKLSASSSERK 714
Query: 855 STYIS--RCAHKFPPLQS--------------VIKDKDQGIDSFLVEEEMNSDYLXXXXX 898
S + A KF S + + K + D ++
Sbjct: 715 DLLSSTRQRAEKFRSFNSRSSMKKYQSEEDEDISEQKPRAKDKAASGQQSVGSISSRSSQ 774
Query: 899 XXXXXXXKHFSNKVACNQKKSIAPVHRHSSRTVSSGYANRRNLPDNPLAQSVPNFADLRK 958
++ S+ + +S A V + S + ++ RR+ D LAQSVPNF++L K
Sbjct: 775 ARKLQPNRNMSSSIT---PRSAASVPKPSGKVSNTSSGRRRS--DKSLAQSVPNFSELIK 829
Query: 959 ENTKPSAGLSRAAPRTQ 975
ENTKPS+ + R+Q
Sbjct: 830 ENTKPSSLAVKTTMRSQ 846
>AT4G27430.1 | chr4:13718817-13722736 FORWARD LENGTH=1059
Length = 1058
Score = 136 bits (343), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 1 MEPDAPLDFALFQLSPRRSRCELVVSGNGRTERIASGSVKPFVAHLRXXXXXXXXXXXXX 60
M+P LD+ALFQL+P R+RC+LV+ G E++ASG +PFV HL+
Sbjct: 1 MDPRTRLDYALFQLTPTRTRCDLVIFSGGENEKLASGIFQPFVTHLKSVSDQISKGGYSV 60
Query: 61 XIRLQLDRRAAWFSKGTLERFVRFVSTPEVLEMANTFDAEMSQLEGARK----------- 109
+R WF+K TL+RFVRFV+TPEVLE + T + E+ Q+E + +
Sbjct: 61 TLRPS-SVGVPWFTKVTLQRFVRFVTTPEVLERSVTLEKEIEQIEDSIQANAAAIAGEAE 119
Query: 110 ------IYAQXXXXXXXXXXXXXXXDI----TKKELLRAIDVRLSALKQDLVTACARASS 159
+ D +K L R ++ R +AL ++ A ARA
Sbjct: 120 GNELGGTWTSQKSTALSKTKGETDGDTVEENSKVGLQRVLENRKAALCKEQAMAYARALV 179
Query: 160 AGFNPDSVSELVLFADHFGANRLSEACNKFMSLCQRR 196
GF D + +L FAD FGA+RL EAC F+ LC+R+
Sbjct: 180 VGFELDYMDDLFSFADAFGASRLREACVNFVDLCKRK 216
>AT1G61100.1 | chr1:22508831-22512122 REVERSE LENGTH=809
Length = 808
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 1 MEPDAPLDFALFQLSPRRSRCELVVSGNGRTERIASGSVKPFVAHLRXXXXXXXXXXXXX 60
M+ A LD ALFQL+P R+R +LV+ + E++ASG +PFV+HL+
Sbjct: 1 MDSRAILDSALFQLTPTRTRFDLVLFCGSKKEKLASGIFEPFVSHLKFARDQISKGGYSI 60
Query: 61 XIRLQLDRRAAWFSKGTLERFVRFVSTPEVLEMANTFDAEMSQLE----------GARKI 110
+ ++WF+K T +RFVRFV+TP ++E T + E+ Q+E A +
Sbjct: 61 SL-TPPSSHSSWFTKSTFDRFVRFVNTPAIIERFATLEKEILQIENSIQANEIANAADAL 119
Query: 111 YAQXXXXXXXXXXXXXXXDITKKE----------------LLRAIDVRLSALKQDLVTAC 154
Q + +KKE L R ++ R + L+++ A
Sbjct: 120 QLQDGSNSGDSSNLKKSNESSKKESENGNEVVGEETSKIQLQRLLETRRTLLRREQAMAY 179
Query: 155 ARASSAGFNPDSVSELVLFADHFGANRLSEACNKFMSLCQRR 196
AR AG+ DS+ +L+LFAD FGA+RL EAC + L +++
Sbjct: 180 ARGVVAGYEIDSIDDLILFADAFGASRLREACIMYKELWKKK 221
>AT5G43310.1 | chr5:17379735-17385387 REVERSE LENGTH=1238
Length = 1237
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 71/110 (64%)
Query: 1 MEPDAPLDFALFQLSPRRSRCELVVSGNGRTERIASGSVKPFVAHLRXXXXXXXXXXXXX 60
M+ LD FQL+P R+RC+L+V+ NG+TE+IA+G + PF+AHL+
Sbjct: 1 MKSSTRLDSVAFQLTPTRTRCDLLVTANGKTEKIATGLLDPFLAHLKTAKDQLEKGGYSI 60
Query: 61 XIRLQLDRRAAWFSKGTLERFVRFVSTPEVLEMANTFDAEMSQLEGARKI 110
++ + AAWF+KGT+ERFVRFVSTPEV+E T + E+ Q++ A I
Sbjct: 61 ILKPEASDNAAWFTKGTIERFVRFVSTPEVIERVYTLETEIIQIKEAIGI 110
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 129 DITKKELLRAIDVRLSALKQDLVTACARASSAGFNPDSVSELVLFADHFGANRLSEACNK 188
+ + ++++ ++ R L+++ A ARA +AGF D + L+ FA FGA+RL +AC K
Sbjct: 225 NCIRAQVMKVLETRKIMLQKEQGMAFARAVAAGFEADDMIPLISFAKTFGASRLMDACVK 284
Query: 189 FMSLCQRR 196
FM L +++
Sbjct: 285 FMDLWKKK 292
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.310 0.126 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 26,998,221
Number of extensions: 1104544
Number of successful extensions: 3013
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 2979
Number of HSP's successfully gapped: 15
Length of query: 1365
Length of database: 11,106,569
Length adjustment: 111
Effective length of query: 1254
Effective length of database: 8,063,393
Effective search space: 10111494822
Effective search space used: 10111494822
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 118 (50.1 bits)