BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0613900 Os07g0613900|Os07g0613900
(1453 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576 201 3e-51
AT1G43760.1 | chr1:16528880-16531065 REVERSE LENGTH=627 135 2e-31
AT3G09510.1 | chr3:2921804-2923258 FORWARD LENGTH=485 124 4e-28
ATMG00310.1 | chrM:90883-91347 REVERSE LENGTH=155 123 8e-28
AT2G02650.1 | chr2:735411-736546 FORWARD LENGTH=366 88 3e-17
AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344 84 4e-16
AT4G20520.1 | chr4:11045912-11047716 FORWARD LENGTH=377 75 3e-13
AT1G40390.1 | chr1:15432576-15434674 REVERSE LENGTH=427 70 7e-12
AT2G22440.1 | chr2:9528910-9529917 FORWARD LENGTH=257 54 7e-07
>AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576
Length = 575
Score = 201 bits (510), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 236/519 (45%), Gaps = 27/519 (5%)
Query: 930 AIPTFAMGCFDLTKDICEQISKMIARYWWSNQEKENKMHWLSWEKLTEPKWAGGLGFRDI 989
A+PT+ M CF L K +C+QI ++A +WW N+++ MHW +W+ L+ K GG+GF+DI
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61
Query: 990 HAFNLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLLTL 1049
AFNLA+L KQ WR++ PESL A+V K++Y+ + +A + S+ W+SI L
Sbjct: 62 EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121
Query: 1050 RDGMIWRVGNGAAINIWSDPWI---PSDHTRR-----PITPRGRNLVTRVEELIDPSTGS 1101
R G VGNG I IW W+ P+ R P + + +V +LID S
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181
Query: 1102 WDVELLTQTFWPEDVNMIRTI-PVHIEMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRK 1160
W +++ F + +I + P + D W Y G ++VKS Y V K
Sbjct: 182 WRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQ---IINK 238
Query: 1161 RGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCII 1220
R S + + +Y +K+WK Q K++HF+W+ N L + L R + +S CI
Sbjct: 239 RSSPQEVSEPSLNPIY-QKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIR 297
Query: 1221 CNRMNEDAGHLFFKCKKVKKVWQENNLEI-LRQELAEKRSGREVMETVFN------RPAK 1273
C E HL FKC + W +++ I L E A+ S + VFN + K
Sbjct: 298 CPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWAD--SIYVNLYWVFNLGNGNPQWEK 355
Query: 1274 EILLASITLWQWWSERNR-VQEGERGRSPSELGFIIAALAEEYMKLNKKDSKRAPSRNE- 1331
L LW+ W RN V G + L L E ++ + P N
Sbjct: 356 ASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRS 415
Query: 1332 ---KWSRTDQGVMKINTDGAFDPFTRTGGWGFAIRDHSGKVVKSGAGKVQILMNAFHAEA 1388
+W +K NTD ++ G G+ +R+ G+V GA + L + AE
Sbjct: 416 SCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAEL 475
Query: 1389 LACAAGIRAASECGMQRVTAETDSTMLKSALEKNTFASS 1427
A + + S V E+DS +L L + S
Sbjct: 476 EAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEIWPS 514
>AT1G43760.1 | chr1:16528880-16531065 REVERSE LENGTH=627
Length = 626
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 188/453 (41%), Gaps = 56/453 (12%)
Query: 361 IEEGGGGSWRFIGVYGEAQSDLRFKTWDTLRSLAM--NPAQPWLMAGDFNEILVAAEK-- 416
I + SWR Y ++ + WD S+ + Q ++ GDF++I ++
Sbjct: 179 ILDSTLPSWRLDTNYCCSELGRIWIVWDPSVSVLVFKKTDQLMILVGDFDQIAATSDHYS 238
Query: 417 --QGGRPKCQAQMDKFRDTLADCGLIDIGFEGDMFTWRNNSHTEEGYIREHLDRAVANQE 474
Q P +++F++ L D L+DI G +TW N H ++ I LDRA+AN +
Sbjct: 239 VLQTSIP--MRGLEEFQNCLRDSDLVDIPSRGVHYTWSN--HQDDNPIIRKLDRAIANGD 294
Query: 475 WRVKFPSFRVVNGDPRHSDHRPVIITTCGGRKGVMQRGSSSFRFEAAWLAEEKCREVVSE 534
W FPS V SDH P II + + +R FR+ + ++
Sbjct: 295 WFSSFPSAIAVFELSGVSDHSPCIIIL----ENLPKRSKKCFRYFSFLSTHPTFLVSLTV 350
Query: 535 NWEMASTLAEGCDECGEGGSFRGNICK----------EKVVKEGVLKYKLEKLEEQV--- 581
WE + GE CK + KE + LE ++ Q+
Sbjct: 351 AWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEAL--DSLESIQSQLLTN 408
Query: 582 -----------------------DTYWRQRAHVAWLQKGDRNTSFFHATCSERKRSNRIG 618
++++RQ++ + WLQ GD NT FFH + N I
Sbjct: 409 PSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIK 468
Query: 619 RLKKEDGSWVESEEEKKSFIMQYFKNMFQSNGCQHPERLLSKVKKKVTEEMNECLMAEFI 678
L+ +D VE+ + K I+ Y+ ++ S+ + ++K N+ L +
Sbjct: 469 FLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLS 528
Query: 679 V----EEIKTSIDSIGDLKAPGPDGMPAVFYKNFWDVVGGKVTSEVLDILNGGQMPLGWN 734
+EI ++ ++ KAPGPD A F+ W VV + V + G + +N
Sbjct: 529 ALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFN 588
Query: 735 ETTIVLIPKVKQPEQIKDLRPISLRNVLYKIVS 767
T I LIPKV +Q+ RP+S V+YKI++
Sbjct: 589 ATAITLIPKVTGVDQLSMFRPVSCCTVVYKIIT 621
>AT3G09510.1 | chr3:2921804-2923258 FORWARD LENGTH=485
Length = 484
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 191/451 (42%), Gaps = 30/451 (6%)
Query: 1016 LKAKYYPSGNIFSAKKCANMSYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPSDH 1075
+KA+Y+ +I AK SY W S+ G+ L+ G +G+G I I D I H
Sbjct: 1 MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDN-IVDSH 59
Query: 1076 TRRPITPRGRNLVTRVEELID--PSTGSWDVELLTQTFWPEDVNMIRTIPV-HIEMDDML 1132
RP+ + L + S WD ++Q D I I + + D +
Sbjct: 60 PPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKI 119
Query: 1133 AWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHF 1192
W+Y+ G ++V+S Y + + +GS + + ++W + + K+KHF
Sbjct: 120 IWNYNTTGEYTVRSGYWLLTHDP--STNIPAINPPHGSIDLKT---RIWNLPIMPKLKHF 174
Query: 1193 IWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKVKKVWQENNLEILRQ 1252
+WR LA L RGM +D C C+R NE H F C W+ ++ ++R
Sbjct: 175 LWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRN 234
Query: 1253 ELAE---KRSGREVMETVFNRPAKEI--LLASITLWQWWSERNRVQEGERGRSPSELGFI 1307
+L + + ++ V + + LL +W+ W RN V + SPS+ +
Sbjct: 235 QLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKT--V 292
Query: 1308 IAALAEEYMKLNKKDS-KRAPSRNEK-------WSRTDQGVMKINTDGAFD--PFTRTGG 1357
++A AE + LN S K+ PS + W +K N D FD TGG
Sbjct: 293 LSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGG 352
Query: 1358 WGFAIRDHSGKVVKSGAGKVQILMNAFHAEALACAAGIRAASECGMQRVTAETDSTMLKS 1417
W IR+H G + G+ K+ N AE A A ++ G +V E D L +
Sbjct: 353 W--IIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLIN 410
Query: 1418 ALEKNTFASSALGGIICEIKNFVN-FAFLSF 1447
+ +F SS L + +I + N FA + F
Sbjct: 411 LINGISFHSS-LANHLEDISFWANKFASIQF 440
>ATMG00310.1 | chrM:90883-91347 REVERSE LENGTH=155
Length = 154
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 94/152 (61%), Gaps = 1/152 (0%)
Query: 930 AIPTFAMGCFDLTKDICEQISKMIARYWWSNQEKENKMHWLSWEKLTEPKWA-GGLGFRD 988
A+P +AM CF L+K +C++++ + +WWS+ E + K+ W++W+KL + K GGLGFRD
Sbjct: 2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61
Query: 989 IHAFNLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLLT 1048
+ FN A+LAKQ +R+I P +L +++L+++Y+P ++ SY WRSI G
Sbjct: 62 LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121
Query: 1049 LRDGMIWRVGNGAAINIWSDPWIPSDHTRRPI 1080
L G++ +G+G +W D WI + P+
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153
>AT2G02650.1 | chr2:735411-736546 FORWARD LENGTH=366
Length = 365
Score = 88.2 bits (217), Expect = 3e-17, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 34/295 (11%)
Query: 1169 GSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDA 1228
GSTE + + +WK+ + K+KHF+WR LA L+ R +D D C C E
Sbjct: 29 GSTEVK---QAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETI 85
Query: 1229 GHLFFKCKKVKKVWQENNLEILRQELAEKRSGREVMETVFNRPAKEI------LLASITL 1282
H+ F C + VW+ N+ I+ + S + + + + L +
Sbjct: 86 HHIMFNCPYTQSVWRSANI-IIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIM 144
Query: 1283 WQWWSERNRVQEGERGRSPSELGFIIAALAEEYMKLNK--------------KDSKRAPS 1328
W+ W RN ++ +SP A E++ N+ + S+R S
Sbjct: 145 WRLWKSRNVFLFQQKCQSPDYEARKGIQDATEWLNANETTENTNVHVATNPIQTSRRDSS 204
Query: 1329 RNEKWSRTDQGVMKINTDGAF---DPFTRTGGWGFAIRDHSGKVVKSGAGKVQILMNAFH 1385
+W+ +G +K N D + P+TR+ G+ IR+ +G +V G K+Q + H
Sbjct: 205 ---QWNPPPEGWVKCNFDSGYTQGSPYTRS---GWTIRECNGHIVLCGNAKLQSSTCSLH 258
Query: 1386 AEALACAAGIRAASECGMQRVTAETDSTMLKSALEKNTFASSALGGIICEIKNFV 1440
AEAL ++ G++ V E+DS L + L N S LG +I +I++++
Sbjct: 259 AEALGFLHALQVIWAHGLRYVWFESDSKSLVT-LINNGEDHSLLGTLIYDIRHWM 312
>AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344
Length = 343
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 31/264 (11%)
Query: 1179 KVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKV 1238
K+WK++ K+KHF+W+ LA NL++R + +C C + +E + HLFF C
Sbjct: 17 KIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYA 76
Query: 1239 KKVWQENNLEILRQELAEKRSGREVMET---------VFNRPAKEILLASITLWQWWSER 1289
++VW+ + I QEL R+ MET + NR + LA LW+ W R
Sbjct: 77 QQVWRASG--IPHQEL---RTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSR 131
Query: 1290 NRV----------QEGERGRSP----SELGFIIAALAEEYMKLNKKDSKRAPSRNEKWSR 1335
N++ +R R+ + + +L ++ + A + KW R
Sbjct: 132 NQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMART---KWQR 188
Query: 1336 TDQGVMKINTDGAFDPFTRTGGWGFAIRDHSGKVVKSGAGKVQILMNAFHAEALACAAGI 1395
+K N DGAF+ TR G+ +RD +G + SG ++ +E A +
Sbjct: 189 PPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIAM 248
Query: 1396 RAASECGMQRVTAETDSTMLKSAL 1419
+ A G ++V E DS ++ +
Sbjct: 249 QHAWSQGYRKVIFEGDSKQVEELM 272
>AT4G20520.1 | chr4:11045912-11047716 FORWARD LENGTH=377
Length = 376
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 770 LANRVKKVLPDVISQSQSAFVPGHLISDNILIAYEQTHCLRHKRTGNVGFAALKLDMSKA 829
+ R+K ++ ++I +Q++F+PG + +DNI+ E H +R K+ G G+ LKLD+ KA
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKK-GVKGWMLLKLDLEKA 59
Query: 830 YDRVEWEFLSEMMIKLGFNQI---EVMHSSY 857
YDR+ W++L + +I GF ++ E+ S++
Sbjct: 60 YDRIRWDYLEDTLISAGFPEVWLPEIARSTF 90
>AT1G40390.1 | chr1:15432576-15434674 REVERSE LENGTH=427
Length = 426
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 32/242 (13%)
Query: 383 RFKTWDTLRSLAMNPA---QPWLMAGDFNEILVAAEKQGGRPKCQAQ--MDKFRDTLADC 437
R WD + L+ + PWL+ GDFN+I E P + ++ + + D
Sbjct: 101 RRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDS 160
Query: 438 GLIDIGFEGDMFTWRNNSHTEEGYIREHLDRAVANQEWRVKFPSFRVVNGDPRHSDHRPV 497
L+D+ G ++TW N H ++ I LDRA+ N W FP+ + P SDH
Sbjct: 161 DLVDLPCRGVLYTWSN--HQQDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAAC 218
Query: 498 IITTCGGRKGVMQRGSSSFRF-----------EAAWLAEEKCREVVSENWEMASTLAEGC 546
++ ++ F F AAW +K V S + + L E
Sbjct: 219 MVILNNSPPLSKKKSFKYFSFLSTHPDFISSILAAW---QKEIAVGSFMFSLGELLKEAK 275
Query: 547 DECGEGGSFRG--NICKEKVVKEGVLKYKLEKLEEQ--------VDTYWRQRAHVAWLQK 596
C G + RG NI + + ++ E + + ++++++Q++ + WL++
Sbjct: 276 KAC-RGLNRRGFSNIQAQLMSNPSDFLFRAEHVARKNWNFFAAALESFYKQKSRIKWLKE 334
Query: 597 GD 598
GD
Sbjct: 335 GD 336
>AT2G22440.1 | chr2:9528910-9529917 FORWARD LENGTH=257
Length = 256
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 1065 IWSDPWIPSDHTRRPITPRG-RNLVTRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTI- 1122
+W DPWIP+ R + R+ + V +LID +T W ++ L P D+ +I I
Sbjct: 5 VWKDPWIPTILARPAKSILNIRDSLLYVNDLIDQNTNLWKLDRLQALIDPVDIPLILGIR 64
Query: 1123 PVHIEMDDMLAWHYDEKGLFSVKSAYKVQRD 1153
P + D +W + + G ++VKS Y V RD
Sbjct: 65 PSRTYLSDGFSWSHTKSGNYTVKSGYWVARD 95
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 33,209,699
Number of extensions: 1493349
Number of successful extensions: 3989
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 3981
Number of HSP's successfully gapped: 10
Length of query: 1453
Length of database: 11,106,569
Length adjustment: 111
Effective length of query: 1342
Effective length of database: 8,063,393
Effective search space: 10821073406
Effective search space used: 10821073406
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 118 (50.1 bits)