BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0608800 Os07g0608800|AK059637
(389 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26350.1 | chr2:11217767-11220415 REVERSE LENGTH=382 437 e-123
AT3G58030.1 | chr3:21485527-21486837 FORWARD LENGTH=437 60 2e-09
AT4G03510.1 | chr4:1557905-1558654 REVERSE LENGTH=250 60 3e-09
AT4G28270.1 | chr4:14007614-14008195 REVERSE LENGTH=194 59 5e-09
AT4G27470.1 | chr4:13735576-13736307 FORWARD LENGTH=244 59 5e-09
AT2G42030.1 | chr2:17539069-17540346 REVERSE LENGTH=426 58 7e-09
AT2G23780.1 | chr2:10123551-10124234 REVERSE LENGTH=228 56 4e-08
AT2G44410.1 | chr2:18328873-18330114 FORWARD LENGTH=414 55 7e-08
AT1G19310.1 | chr1:6676424-6677104 REVERSE LENGTH=227 55 8e-08
AT1G18660.4 | chr1:6421433-6425489 FORWARD LENGTH=492 52 7e-07
AT1G74990.1 | chr1:28159837-28160250 REVERSE LENGTH=138 50 2e-06
AT5G05130.1 | chr5:1512173-1514918 FORWARD LENGTH=863 49 5e-06
AT5G01960.1 | chr5:370811-372775 FORWARD LENGTH=427 49 5e-06
AT4G12140.1 | chr4:7266546-7267154 REVERSE LENGTH=203 48 9e-06
>AT2G26350.1 | chr2:11217767-11220415 REVERSE LENGTH=382
Length = 381
Score = 437 bits (1124), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 260/360 (72%), Gaps = 12/360 (3%)
Query: 33 QPEIMRAAEKDDGYAAHVTEACRDAFRHLFGTRVAVAYQNEIKLLGQSLYYLLTTGSGQQ 92
QPEIMRAAEKDD YA+ + EACRDAFRHLFGTR+A+AYQ E+KLLGQ LYY+LTTGSGQQ
Sbjct: 31 QPEIMRAAEKDDQYASFIHEACRDAFRHLFGTRIALAYQKEMKLLGQMLYYVLTTGSGQQ 90
Query: 93 TLGEEYCDISQVATSHGLPPTPARRILFILYQTTVPYLAERISSRIVARGIALEDSQLDD 152
TLGEEYCDI QVA +GL PTPARR LFILYQT VPY+AERIS+R + + ++S +
Sbjct: 91 TLGEEYCDIIQVAGPYGLSPTPARRALFILYQTAVPYIAERISTRAATQAVTFDESD-EF 149
Query: 153 HSESDSSSIGTAAQPSPIXXXXXXXXXXXXXXXXXXXVHTLWEWVLRKWPSMLPFAQDFI 212
+S S PS + W +++WP +LP A++ +
Sbjct: 150 FGDSHIHSPRMIDLPS----SSQVETSTSVVSRLNDRLMRSWHRAIQRWPVVLPVAREVL 205
Query: 213 QLTIRTNLMFFYFEGLYYHLPKRAAGIRYVFIGKPLNQRPRYQILGIFLLIQLCILGAER 272
QL +R NLM FYFEG YYH+ KRA+G+RYVFIGK LNQRPRYQILG+FLLIQLCIL AE
Sbjct: 206 QLVLRANLMLFYFEGFYYHISKRASGVRYVFIGKQLNQRPRYQILGVFLLIQLCILAAEG 265
Query: 273 LRRSNLSTIASSINQIXXXXXXXXXXXXVPVLNEDGNII-SDIRHGK--TADLATSSEAS 329
LRRSNLS+I SSI Q +PVLNE+GN+I S+ G T+D +TS+EA
Sbjct: 266 LRRSNLSSITSSIQQASIGSYQTSGGRGLPVLNEEGNLITSEAEKGNWSTSD-STSTEAV 324
Query: 330 SGKSKCTLCLSTRQNPTATTCGHVFCWSCIMEWCNEKPECPLCRTPITHSSLICIYHSDF 389
KCTLCLSTRQ+PTAT CGHVFCWSCIMEWCNEK ECPLCRTP THSSL+C+YHSDF
Sbjct: 325 ---GKCTLCLSTRQHPTATPCGHVFCWSCIMEWCNEKQECPLCRTPNTHSSLVCLYHSDF 381
>AT3G58030.1 | chr3:21485527-21486837 FORWARD LENGTH=437
Length = 436
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 318 KTADLATSSEASSGKSKCTLCLSTRQNPTATTCGHVFCWSCIMEW--CNEKPECPLCRTP 375
K AD+ SS + C +CL + P T CGH++CW C+ +W ++ ECP+C+
Sbjct: 122 KKADVEKSSGSDGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQISDAKECPVCKGE 181
Query: 376 ITHSSLICIY 385
+T ++ IY
Sbjct: 182 VTSKTVTPIY 191
>AT4G03510.1 | chr4:1557905-1558654 REVERSE LENGTH=250
Length = 249
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 325 SSEASSGKSKCTLCLSTRQNPTATTCGHVFCWSCIMEWCNEKP-----------ECPLCR 373
S + C +CL + Q P T CGH+FCW CI +W + + +CP+C+
Sbjct: 38 SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCK 97
Query: 374 TPITHSSLICIY 385
+ ++HS+L+ +Y
Sbjct: 98 SKVSHSTLVPLY 109
>AT4G28270.1 | chr4:14007614-14008195 REVERSE LENGTH=194
Length = 193
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 16/73 (21%)
Query: 329 SSGKSKCTLCLSTRQNPTATTCGHVFCWSCIMEWC----------------NEKPECPLC 372
S G C +CL ++P T CGH+FCW CI +W E P+CP+C
Sbjct: 15 SGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVC 74
Query: 373 RTPITHSSLICIY 385
++ ++ ++L+ IY
Sbjct: 75 KSDVSEATLVPIY 87
>AT4G27470.1 | chr4:13735576-13736307 FORWARD LENGTH=244
Length = 243
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 306 EDGNIISDIRHGKTADLATSSEASSGKSKCTLCLSTRQNPTATTCGHVFCWSCIMEWCN- 364
D I+ + T SG C +CL T +P T CGH+FCW CI +W +
Sbjct: 15 HDNGFIAKQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHV 74
Query: 365 ---------EKPECPLCRTPITHSSLICIY 385
+ CP+C++ IT +SL+ +Y
Sbjct: 75 QLSSVSVDQHQNNCPVCKSNITITSLVPLY 104
>AT2G42030.1 | chr2:17539069-17540346 REVERSE LENGTH=426
Length = 425
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 335 CTLCLSTRQNPTATTCGHVFCWSCIMEW--CNEKPECPLCRTPITHSSLICIY 385
C +CL ++P T CGH++CWSC+ +W +E ECP+C+ ++ ++ IY
Sbjct: 141 CYICLDLSKDPVVTNCGHLYCWSCLYQWLQVSEAKECPVCKGEVSVKTVTPIY 193
>AT2G23780.1 | chr2:10123551-10124234 REVERSE LENGTH=228
Length = 227
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 324 TSSEASSGKSKCTLCLSTRQNPTATTCGHVFCWSCIMEWCNEKP---ECPLCRTPITHSS 380
+ G +C +C Q+P T CGH+FCW C+ W + ECP+C+ +
Sbjct: 17 NDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQDDK 76
Query: 381 LICIY 385
L+ +Y
Sbjct: 77 LVPLY 81
>AT2G44410.1 | chr2:18328873-18330114 FORWARD LENGTH=414
Length = 413
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 318 KTADLATSSEASSGKSKCTLCLSTRQNPTATTCGHVFCWSCIME----WCNEKPECPLCR 373
K ++ +S G C +CL ++P T CGH+FCW C + + N K ECP+C
Sbjct: 108 KALNMEKTSSVPGGFFDCNICLEKAEDPILTCCGHLFCWGCFYQLPLIYLNIK-ECPVCD 166
Query: 374 TPITHSSLICIY 385
+T + +I IY
Sbjct: 167 GEVTDAEVIPIY 178
>AT1G19310.1 | chr1:6676424-6677104 REVERSE LENGTH=227
Length = 226
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 334 KCTLCLSTRQNPTATTCGHVFCWSCIMEWCN---EKPECPLCRTPITHSSLICIY 385
+C +CL Q+P T CGH+FCW C+ +W + + +CP+C+ I L+ +Y
Sbjct: 22 ECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDRLVPLY 76
>AT1G18660.4 | chr1:6421433-6425489 FORWARD LENGTH=492
Length = 491
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 330 SGKSKCTLCLSTRQNPTATTCGHVFCWSCIMEWCNEKPECPLCRTPITHSSLIC 383
S CT+CL P T CGH FC SC+ + + +CPLCRT I + C
Sbjct: 191 SDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDRGNKCPLCRTVIFMTPRTC 244
>AT1G74990.1 | chr1:28159837-28160250 REVERSE LENGTH=138
Length = 137
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 322 LATSSEASSGKSKCTLCLSTRQNPTATTCGHVFCWSCIMEWCN---EKPECPLCRTPITH 378
+ + +S C +CL + P T CGH+FCW C+ +W + + CP+C+ +
Sbjct: 6 ITNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALVKE 65
Query: 379 SSLICIY 385
+L+ +Y
Sbjct: 66 DTLVPLY 72
>AT5G05130.1 | chr5:1512173-1514918 FORWARD LENGTH=863
Length = 862
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 335 CTLCLSTRQNPTATTCGHVFCWSCIMEWCNE-KPECPLCRTPITHSSL 381
C +C+S N T C H+FC +CI++ KP CPLCR +T S L
Sbjct: 616 CPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDL 663
>AT5G01960.1 | chr5:370811-372775 FORWARD LENGTH=427
Length = 426
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 323 ATSSEASSGKSKCTLCLSTRQNPTATTCGHVFCWSCIMEWCNEKPECPLCRTPITHSSL 381
AT+ + ++ C +C P C H+FC C+ EW + CPLCR + + L
Sbjct: 353 ATTEQVNAAGDLCAICQEKMHTPILLRCKHMFCEDCVSEWFERERTCPLCRALVKPADL 411
>AT4G12140.1 | chr4:7266546-7267154 REVERSE LENGTH=203
Length = 202
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 335 CTLCL-----STRQNPTATTCGHVFCWSCIMEWCNEKPECPLCRT 374
C++CL S++ PT +C HVF SC++EW K CP+CRT
Sbjct: 153 CSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMCRT 197
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,984,313
Number of extensions: 255259
Number of successful extensions: 1080
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 1124
Number of HSP's successfully gapped: 16
Length of query: 389
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 289
Effective length of database: 8,364,969
Effective search space: 2417476041
Effective search space used: 2417476041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)