BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0606600 Os07g0606600|AK112118
(224 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14540.1 | chr4:8344663-8345148 FORWARD LENGTH=162 211 2e-55
AT5G47640.1 | chr5:19309414-19309986 FORWARD LENGTH=191 190 4e-49
AT3G53340.1 | chr3:19774667-19775991 REVERSE LENGTH=177 182 2e-46
AT2G37060.1 | chr2:15576336-15577660 FORWARD LENGTH=174 179 9e-46
AT2G13570.1 | chr2:5655842-5656489 REVERSE LENGTH=216 177 3e-45
AT5G47670.1 | chr5:19315061-19315975 FORWARD LENGTH=235 172 2e-43
AT2G38880.8 | chr2:16238685-16240316 FORWARD LENGTH=165 171 2e-43
AT2G47810.1 | chr2:19582938-19583420 REVERSE LENGTH=161 162 2e-40
AT1G21970.1 | chr1:7727750-7729571 REVERSE LENGTH=239 150 4e-37
AT1G09030.1 | chr1:2908611-2909030 REVERSE LENGTH=140 142 2e-34
AT5G08190.1 | chr5:2636204-2637125 FORWARD LENGTH=164 70 6e-13
AT5G23090.2 | chr5:7749391-7750203 FORWARD LENGTH=160 70 7e-13
AT2G27470.1 | chr2:11745196-11746375 REVERSE LENGTH=276 54 9e-08
>AT4G14540.1 | chr4:8344663-8345148 FORWARD LENGTH=162
Length = 161
Score = 211 bits (538), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/117 (85%), Positives = 108/117 (92%), Gaps = 1/117 (0%)
Query: 1 MPDSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSE 60
M DSDN+SGG + G AS REQDRFLPIANVSRIMK+ALPANAKISKDAKETVQECVSE
Sbjct: 1 MADSDNDSGGHKDGGN-ASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSE 59
Query: 61 FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKA 117
FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDY++PLK+YL K+RE+EGEK
Sbjct: 60 FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKT 116
>AT5G47640.1 | chr5:19309414-19309986 FORWARD LENGTH=191
Length = 190
Score = 190 bits (483), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 96/99 (96%)
Query: 19 SAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 78
S REQDRFLPIANVSRIMK+ALPANAKISKDAKET+QECVSEFISF+TGEASDKCQ+EKR
Sbjct: 24 SPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKR 83
Query: 79 KTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKA 117
KTINGDDLLWAMTTLGFEDY++PLK+YL +FRE+EGE+
Sbjct: 84 KTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERT 122
>AT3G53340.1 | chr3:19774667-19775991 REVERSE LENGTH=177
Length = 176
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 80/97 (82%), Positives = 90/97 (92%)
Query: 19 SAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 78
+ REQDRFLPIAN+SRIMKR LP N KI+KDAKET+QECVSEFISF+T EASDKCQREKR
Sbjct: 26 NVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKR 85
Query: 79 KTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGE 115
KTINGDDLLWAM TLGFEDYIDPLK+YL ++RE+EG+
Sbjct: 86 KTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGD 122
>AT2G37060.1 | chr2:15576336-15577660 FORWARD LENGTH=174
Length = 173
Score = 179 bits (454), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 79/96 (82%), Positives = 89/96 (92%)
Query: 20 AREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRK 79
REQDRFLPIAN+SRIMKR LPAN KI+KDAKE VQECVSEFISF+T EASDKCQREKRK
Sbjct: 28 VREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRK 87
Query: 80 TINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGE 115
TINGDDLLWAM TLGFEDY++PLK+YL ++RE+EG+
Sbjct: 88 TINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGD 123
>AT2G13570.1 | chr2:5655842-5656489 REVERSE LENGTH=216
Length = 215
Score = 177 bits (450), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 79/97 (81%), Positives = 89/97 (91%)
Query: 21 REQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 80
+EQDRFLPIANV RIMK+ LP N KISKDAKETVQECVSEFISF+TGEASDKCQREKRKT
Sbjct: 35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94
Query: 81 INGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKA 117
INGDD++WA+TTLGFEDY+ PLK+YL K+R+ EGEK
Sbjct: 95 INGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKV 131
>AT5G47670.1 | chr5:19315061-19315975 FORWARD LENGTH=235
Length = 234
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Query: 2 PDSDNESGGPSNAGEY-ASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSE 60
P N+ SN GE + REQDRF+PIANV RIM+R LPA+AKIS D+KET+QECVSE
Sbjct: 37 PPEFNQPNKTSNGGEEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSE 96
Query: 61 FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKAI 118
+ISFITGEA+++CQRE+RKTI +D+LWAM+ LGF+DYI+PL LYLH++RELEGE+ +
Sbjct: 97 YISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGV 154
>AT2G38880.8 | chr2:16238685-16240316 FORWARD LENGTH=165
Length = 164
Score = 171 bits (433), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 92/111 (82%), Gaps = 4/111 (3%)
Query: 2 PDSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEF 61
P S GG S S REQDR+LPIAN+SRIMK+ALP N KI KDAK+TVQECVSEF
Sbjct: 5 PSSPAGDGGESGG----SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEF 60
Query: 62 ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFREL 112
ISFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFEDY++PLK+YL ++RE+
Sbjct: 61 ISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREV 111
>AT2G47810.1 | chr2:19582938-19583420 REVERSE LENGTH=161
Length = 160
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 83/97 (85%)
Query: 20 AREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRK 79
+EQDR LPIANV RIMK LPANAK+SK+AKET+QECVSEFISF+TGEASDKC +EKRK
Sbjct: 49 VKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRK 108
Query: 80 TINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEK 116
T+NGDD+ WAM LGF+DY LK YLH++R LEGEK
Sbjct: 109 TVNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEK 145
>AT1G21970.1 | chr1:7727750-7729571 REVERSE LENGTH=239
Length = 238
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 89/98 (90%)
Query: 20 AREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRK 79
AREQD+++PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA+++CQRE+RK
Sbjct: 57 AREQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRK 116
Query: 80 TINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKA 117
TI +D+LWAM+ LGF++Y+DPL ++++++RE+E ++
Sbjct: 117 TITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRG 154
>AT1G09030.1 | chr1:2908611-2909030 REVERSE LENGTH=140
Length = 139
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 80/96 (83%)
Query: 22 EQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTI 81
++DR LPIANV R+MK+ LP+NAKISK+AK+TVQEC +EFISF+T EAS+KC RE RKT+
Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62
Query: 82 NGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKA 117
NGDD+ WA++TLG ++Y D + +LHK+RE E E+
Sbjct: 63 NGDDIWWALSTLGLDNYADAVGRHLHKYREAERERT 98
>AT5G08190.1 | chr5:2636204-2637125 FORWARD LENGTH=164
Length = 163
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 57/81 (70%)
Query: 22 EQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTI 81
++D LP A +++I+K LPA+ ++++DA++ + EC EFI+ I+ E+++ C +E ++TI
Sbjct: 11 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRTI 70
Query: 82 NGDDLLWAMTTLGFEDYIDPL 102
+ +L A+ LGF +Y++ +
Sbjct: 71 APEHVLKALQVLGFGEYVEEV 91
>AT5G23090.2 | chr5:7749391-7750203 FORWARD LENGTH=160
Length = 159
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 54/78 (69%)
Query: 23 QDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTIN 82
+D LP A +++I+K LP + ++++DA++ + EC EFI+ ++ E++D C +E ++TI
Sbjct: 12 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIA 71
Query: 83 GDDLLWAMTTLGFEDYID 100
+ +L A+ LGF +YI+
Sbjct: 72 PEHVLKALQVLGFGEYIE 89
>AT2G27470.1 | chr2:11745196-11746375 REVERSE LENGTH=276
Length = 275
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 27 LPIANVSRIMKRALPA-----NAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTI 81
LP+A V R++K+ L + I K+A E FI +++ A+D C+ +R+T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 82 NGDDLLWAMTTLGFEDYIDPLKLYLHKF 109
DD+ A+ + F ++++PLK L F
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSSLEDF 98
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.129 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,103,028
Number of extensions: 100745
Number of successful extensions: 220
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 219
Number of HSP's successfully gapped: 13
Length of query: 224
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 129
Effective length of database: 8,502,049
Effective search space: 1096764321
Effective search space used: 1096764321
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 110 (47.0 bits)