BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0603300 Os07g0603300|AK066770
(940 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G18620.2 | chr1:6410191-6414269 FORWARD LENGTH=1015 189 6e-48
AT1G74160.1 | chr1:27887164-27891151 FORWARD LENGTH=1026 141 2e-33
AT5G15580.1 | chr5:5068495-5071930 REVERSE LENGTH=928 115 2e-25
AT3G02170.1 | chr3:396208-399393 REVERSE LENGTH=906 112 1e-24
>AT1G18620.2 | chr1:6410191-6414269 FORWARD LENGTH=1015
Length = 1014
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 250/920 (27%), Positives = 390/920 (42%), Gaps = 168/920 (18%)
Query: 120 NKSIQQELPYINEQLFVQRPLKSSPSLKDPVMDTRSG-QSNIGFRDIVKDSINRDTGGLT 178
N+ +Q E+ + +F + P DPVM +G + + RD+V+DS+ R+ GL+
Sbjct: 150 NREVQPEISADDRVIFPESPTS------DPVMSQGTGARVGLDLRDVVRDSMYREARGLS 203
Query: 179 VKTSVKDARRNGQYKDSPRPLLLSKSMDGTYVIGIDRSTKVPANAVESSRRFPEQSRFSC 238
D R + +DSPRP L +S + + S + A ++S + +
Sbjct: 204 ------DVCRQNRREDSPRPYGLKQSRP----VDFNESCRALAKLRKTSHHYYNEVDMKD 253
Query: 239 DDRRLLRPVEAQENKKPSTRLKELPRLSLDSRKET-LSSSSRQKTFSYRRTDDSLMDALR 297
R V+++ K +LKELPRLSLDSR L S ++ S + S M+ +
Sbjct: 254 TSRYY---VDSRGKSKSGKKLKELPRLSLDSRDHVDLKSGNK---LSESFSRSSSMNKV- 306
Query: 298 PQDSPGHRRASSVIAKLMGLEEAPNATGVLTVDSYEP-ERSPRPAEDTQKEHPVPSPRRF 356
S +R SV+AKLMGLE P + L+ D + + + P + +E+ + RF
Sbjct: 307 ---SGSPKRPPSVVAKLMGLETLPGSP--LSRDRFNMFDDNSDPFARSLRENSLNRSLRF 361
Query: 357 CQDPRESLPKDESP------------AMKTKPSPRILTESAPWRQQEKIATSSKASQCRD 404
SL KD + MK S R E APW+Q E+ S K + CR
Sbjct: 362 SPSSPRSLGKDPAASSSSPRWRSSEFVMKPLSSLRYPIEPAPWKQTERNRFSQKQA-CRS 420
Query: 405 AEVRPRTASLYAYIERRGGGLEFLECNKDFRALR-ILEALHAK---DAKRQNDGNGA--- 457
+ SL +E + LE KD RAL+ ILEA+ +K D ++Q +
Sbjct: 421 VK------SLSQSMEGKLKDLEVKHSGKDLRALKDILEAMQSKGLFDTRKQQQCSNLEAQ 474
Query: 458 ----LTVAAQQAGDALNTSS----RHFQPPIVVMKPARSTEKQ--PGVSLASVDPLAGFR 507
L +A D+++ + + + PIV+MKPAR EK P SL + L+G
Sbjct: 475 RDYELADSATSKHDSIDLRNPVIPSNMRGPIVIMKPARLVEKSGIPSSSLIPIHSLSGLN 534
Query: 508 --------NLRKLQA-------------RDAPCIGEHETSTNEKVHSRISRAQSKSDEXX 546
N+R+ R PCI + S++ V S S+ +S
Sbjct: 535 KTCREEPVNVRRSSTSRKAVKDRSPGNQRAEPCISSDKKSSSRNVMS--SQVYKESTSKN 592
Query: 547 XXXXXXXXXXXXXXXXVQRKXXXXXXXXXXXXXXXXXXXXXXXXXXGGRTRTKPSQGKNH 606
+ + GGR R++P ++
Sbjct: 593 SGPASSKLQQMKPEHDKRSRPPASPSDSSKLRKQISRQPVESTTSPGGR-RSRPRDQRSL 651
Query: 607 RDNEVSKSPRSRISMVK-EIDISIMDFQKPLASTPSHKGTPSVLASDQKINSLEN----- 660
+ N+ S S S K E +SI + K + + K S L ++ +
Sbjct: 652 QQNDGQLSQMSNKSRTKIEATLSIENGGKSPSVIEAAKAVVSNLIQNKSSPTFSEDGSSE 711
Query: 661 APSPISVLDTSYY-------------HTRLSYSFKDGETHSSEECWNPNSLPDTPQSKTS 707
PSP+SVL+ Y ++ S G H E+ WNP + S
Sbjct: 712 HPSPVSVLNAEIYREIEPSPVKIQASEGSVNGSINSGVEHCEEDQWNPAYSFSKTTTSFS 771
Query: 708 SEVSQIKPENFEALIQKLEQLQSMNDEVANK------------KDHQYIYEILLASGLLH 755
E+++ K +N E L+QKL++L S +DE + DH+YI EILLASGLL
Sbjct: 772 PEMNRKKLQNVEHLVQKLKRLNSSHDETSQDYIASLCENSDPDTDHRYISEILLASGLLL 831
Query: 756 KELSFVAMPGQAWPSSCLINPELFLILEQTKPDFASADQTVTKSSKANTEKLHRRIVFDL 815
++L Q PS INPELFL++EQTK S ++ EK++R++VFD
Sbjct: 832 RDLGSGLTTFQLHPSGHPINPELFLVIEQTK-----------GCSSSSNEKINRKLVFDA 880
Query: 816 VNEITAQKMN-IHCSASQSAKSLQLRK--YNGWRLFKDLCTEVDRLQSESSA-------- 864
VNE+ +K+ + K + RK + L K+LC+E++ LQ ++
Sbjct: 881 VNEMLGKKLAFVESYVDPWMKQAKARKKVLSAQNLLKELCSEIEILQKQAKKRSENLLLL 940
Query: 865 ----------IKCSEEDGDERMLLVEDPLNGIEDWS-FDSESPSTVLEIERLIYKDLIDE 913
+KC +L ED E W+ FD P VL++ERL++KDL+ E
Sbjct: 941 EEEEEEEEDFLKC---------ILDEDMAIQSEKWTDFDDAIPGLVLDMERLLFKDLVKE 991
Query: 914 VIWDEATGKMQGGQWNLKRQ 933
++ E ++QG N +RQ
Sbjct: 992 IVHGE-IDRLQG---NSRRQ 1007
>AT1G74160.1 | chr1:27887164-27891151 FORWARD LENGTH=1026
Length = 1025
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 161/308 (52%), Gaps = 36/308 (11%)
Query: 649 LASDQKINSLENAPSPISVLDTSYY----------HTRLSYSFKDGETHSSEECWNPNSL 698
L+++ + +LE+ PSPISVLD S Y +++ F D + E+ WNP
Sbjct: 711 LSANLSLVALEH-PSPISVLDASTYRETEPSPVKTQGNVAHDFGD---ENCEDQWNPAYS 766
Query: 699 PDTPQSKTSSEVSQIKPENFEALIQKLEQLQSMNDEVAN------------KKDHQYIYE 746
S S E+++ K +N E L+QKL +L S +DE + DH+YI E
Sbjct: 767 FSETTSSFSPEINRKKLQNVEHLVQKLRRLNSSHDEASQDYIASLCENADPTTDHRYISE 826
Query: 747 ILLASGLLHKELSFVAMPGQAWPSSCLINPELFLILEQTKPDFASADQTVTKSSKANTEK 806
ILLASGLL ++L Q PS INPELF +LEQTK + +S EK
Sbjct: 827 ILLASGLLLRDLGSGLTTFQLHPSGHPINPELFFVLEQTKGSSTTHLLHKEESKVLKNEK 886
Query: 807 LHRRIVFDLVNEITAQKM-NIHCSASQSAKS---LQLRKYNGWRLFKDLCTEVDRLQSE- 861
L+R++VFDLVNEI +K+ ++ + + KS + + + +L K+LC+ ++ Q +
Sbjct: 887 LNRKLVFDLVNEILVEKLASVEATTNPLMKSYAKVTKKAVSAQQLLKELCSAIETQQKQA 946
Query: 862 ---SSAIKCSEEDGDERMLLVEDPLNGIEDWS-FDSESPSTVLEIERLIYKDLIDEVIWD 917
S EED + +L ED +W+ F E VL++ERL++KDL++E++
Sbjct: 947 TKRSENFLLEEEDDFLKSILAEDVTIRSGNWADFSGEMSGLVLDVERLVFKDLVNEIVHA 1006
Query: 918 EATGKMQG 925
E T ++Q
Sbjct: 1007 E-TSRLQA 1013
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 184/412 (44%), Gaps = 67/412 (16%)
Query: 148 DPVMDTRSGQSNIGF--RDIVKDSINRDTGGLTVKTSV--KDARRNGQYKDSPRPLLLSK 203
DP M +G S++G RD+V+DS+ R+ GL KT + ++ R + +DSPRP L +
Sbjct: 130 DPEMTEGNGFSHLGLDLRDVVRDSMYREARGLLSKTPMTREEVVRQSRREDSPRPYGLKQ 189
Query: 204 SMDGTYVIGIDRSTKVPANAVESSRRFPEQS-----RFSCDDRRLLRPVEAQENKKPSTR 258
S + ++ S +V A E+S+ + E R+S D L K +
Sbjct: 190 STP----MDLNESFRVLARLRETSQHYNELGMKDAPRYSVDSHDTL---------KSRQK 236
Query: 259 LKELPRLSLDSRKETLSSSSRQKTFSYRRTDDSLMDALRPQDSPGHRRASSVIAKLMGLE 318
LKELPRLSLDSR+ +SS ++ S +R SV+AKLMGLE
Sbjct: 237 LKELPRLSLDSRERATRNSSVDP-----KSSKLSESFSESCSSSSKKRPPSVVAKLMGLE 291
Query: 319 EAP-------------NATGVLTVDSYEPERSPRPAEDTQKEHPVP-SPRRFCQDPRESL 364
P N T + + RS R + P SPR +DP
Sbjct: 292 TLPGSPLGRDIHQFGLNKTNISDQNDDPFSRSLREKNLNRAIRFSPSSPRSLGKDPASPR 351
Query: 365 PKDESPAMKTKPSPRILTESAPWRQQEKIATSSKASQCRDAEVRPRTA-----SLYAYIE 419
++ MK + R E APW+ ++ K + + +P A ++Y+ +E
Sbjct: 352 WRNSDFVMKPLSNTRFPVEPAPWKHADRNRVLQKQASM-PVKAKPYEAPNFPPTVYSEME 410
Query: 420 RRGGGLEFLECNKDFRALR-ILEALHAK---DAKRQNDG------------NGALTVAAQ 463
RR LEF KD RAL+ ILE++ +K D ++Q N A + A
Sbjct: 411 RRLNDLEFKHSGKDLRALKQILESMQSKGFLDTEKQQQSTNFAVQRDYERENSATSNHAM 470
Query: 464 QAGDALNTSSRH--FQPPIVVMKPARSTEKQ--PGVSLASVDPLAGFRNLRK 511
+ + +SS + +Q PIV+MKPA+ EK P SL + L G + +R+
Sbjct: 471 SSRTRVQSSSSNQVYQSPIVIMKPAKLVEKAGIPASSLIPIHSLTGIKKIRR 522
>AT5G15580.1 | chr5:5068495-5071930 REVERSE LENGTH=928
Length = 927
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 143/295 (48%), Gaps = 43/295 (14%)
Query: 662 PSPISVLDTSYYHT-------RLSYSFKDGETHSSEEC-W--NPNSLPDT---PQSKTSS 708
PSP+SVLD ++ ++S FK+ + SSEE W N+L + P+S TS
Sbjct: 640 PSPVSVLDVAFDEDDSPSPVRKISIVFKEDDNLSSEESHWMNKNNNLCRSIVWPESNTS- 698
Query: 709 EVSQIKPENFEALIQKLEQLQSMNDEVANKKDHQYIYEILLASGLLHKELSFVAMPGQAW 768
+ Q E E ++ +D DH+YI EI+LASGLL +++ + + Q
Sbjct: 699 -LKQPDAELTEGFME--------DDAEFKNGDHKYISEIMLASGLL-RDIDYSMISIQLH 748
Query: 769 PSSCLINPELFLILEQTKPDFASADQTVTKSSKAN-------TEKLHRRIVFDLVNEITA 821
+ INP LF +LEQ K S K E+ R+++FD +NEI A
Sbjct: 749 QAHLPINPSLFFVLEQNKTSNVSLQDNKHKGRGFGQQQTVNLVERSKRKLIFDTINEILA 808
Query: 822 QKMNIHCSASQSAKSLQL-------RKYNGWRLFKDLCTEVDRLQSESSAIKCSEEDGDE 874
+ Q + +L + + G L + LC+E+DRLQ S KC ++ DE
Sbjct: 809 HRFAAEGCTKQPSITLSISTQRTHEKSSRGEELLQTLCSEIDRLQDNS---KCILDEDDE 865
Query: 875 RMLLVEDPLNGIEDWSFDSESPSTVLEIERLIYKDLIDEVIWDE--ATGKMQGGQ 927
++ + +G+ + E+P VL+IERLI+KDLI EV+ E A +M GQ
Sbjct: 866 DLIWEDLQSHGMNWKEIEGETPGLVLDIERLIFKDLIGEVVTSEFAAFPRMLSGQ 920
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 119/271 (43%), Gaps = 70/271 (25%)
Query: 235 RFSCDDRRLLRPVEAQENKKPSTRLKELPRLSLDSRKETLSSSSRQKTFSYRRTDDSLMD 294
RFS D+R E +K +LKE PRLSLDSR S+R S
Sbjct: 207 RFSYDER---------ETRKTGAKLKETPRLSLDSRSN-----------SFRSARSSC-- 244
Query: 295 ALRPQD-SPGHRR-ASSVIAKLMGLEEAPNATGVLTVDSYEPERSPRPAEDTQKEHPVPS 352
+ PQ+ GHRR SSV+AKLMGLE P+ +T+ + E
Sbjct: 245 SPEPQELVTGHRRTTSSVVAKLMGLEVIPDEP--VTIQNRE------------------- 283
Query: 353 PRRFCQDPRES------LPKDES-PAMKTKPSPRILTESAPWRQQEKIATSSKASQCRDA 405
RFC PR + L + ++K + +++PW Q + + + DA
Sbjct: 284 -NRFCDSPRPTSRVEVDLQRSRGFDSIKKMMPAKFPMKASPWAQ---VDGAKNQVKIPDA 339
Query: 406 EVRPRTASLYAYIERRGGGLEFLECNKDFRALR-ILEALHAKD--AKRQNDGNGALTVA- 461
T ++Y I++R LEF + KD RAL+ ILEA+ + +D N L +
Sbjct: 340 T----TLTVYGEIQKRLSQLEFKKSEKDLRALKQILEAMEKTQQLISKDDDDNKTLCSSN 395
Query: 462 -----AQQAGDALNTSSRHFQ-PPIVVMKPA 486
Q A+NTSS +F+ IVVMK A
Sbjct: 396 FMQRNNQPIPSAINTSSMNFKSSSIVVMKAA 426
>AT3G02170.1 | chr3:396208-399393 REVERSE LENGTH=906
Length = 905
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 138/280 (49%), Gaps = 40/280 (14%)
Query: 662 PSPISVLDTSYYHT-------RLSYSFKDGETHSSEEC-W--NPNSLPDT---PQSKTSS 708
PSP+SVLD + ++S SFK+ + SEE W P S + PQS
Sbjct: 640 PSPVSVLDAVFDEEDSPSPVRKISLSFKEEDALRSEESEWINKPTSFCRSVPFPQSNRGP 699
Query: 709 EVSQIKP--ENFEALIQKLEQLQSMNDEVANKKDHQYIYEILLASGLLHKELSFVAMPGQ 766
+KP ++FE ++ +S N H+YI EILLASG+L ++L + + Q
Sbjct: 700 ----MKPSSDHFECSPEEGADFKSGN--------HKYILEILLASGIL-RDLEYSMISFQ 746
Query: 767 AWPSSCLINPELFLILEQTK------PDFASADQTVTKSSKANTEKLHRRIVFDLVNEIT 820
+ INP LF ILEQ K PD + + TE + R++VFD VNEI
Sbjct: 747 LHQTRLPINPGLFFILEQNKASNVTLPDNKHRGRGFRQQQTNPTETIRRKLVFDTVNEIL 806
Query: 821 AQKMNIHCSASQSAKSLQLRKYNGW----RLFKDLCTEVDRLQSESSAIKCSEEDGDERM 876
A+K + L+K +L + LC+E+DRLQ +S C ED +E +
Sbjct: 807 ARKFTAEGCIKPRLIANPLKKLEKISKEEQLLQTLCSEIDRLQQNNS--NCILEDDEEDI 864
Query: 877 LLVEDPLNGIEDWSFDSESPSTVLEIERLIYKDLIDEVIW 916
+ + + F+ E+P VL+IER+I++DL++EV +
Sbjct: 865 IWEDLQSQSMNLKEFEGETPGIVLDIERMIFRDLVNEVCF 904
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 128/307 (41%), Gaps = 75/307 (24%)
Query: 229 RFPEQSRFSCDDRRLLRPVEAQENKKPSTRLKELPRLSLDSRKETLSSSSRQKTFSYRRT 288
+F E R S D+R + + ++LKE PRLSLDSR +F R
Sbjct: 202 KFKESHRLSYDEREM-----RNNGFRVGSKLKETPRLSLDSRS---------NSFRSPRA 247
Query: 289 DDSLMDALRPQDSPGHRR-ASSVIAKLMGLEEAPNATGVLTVDSYEPERSPRPAEDTQKE 347
D + + HRR +SSV+AKLMGLE + D+ + E+ ++E
Sbjct: 248 DAARSSCPEEPATMTHRRSSSSVVAKLMGLE--------VIADNSDTEQ--------RRE 291
Query: 348 HPVPSPRRFCQDPR-----------ESLPKDESPAMKTKPSPRILTESAPWRQQEKIATS 396
+ RFC PR S D + + + E APW+Q K S
Sbjct: 292 N------RFCDSPRPMSRVEPTALQRSRSVDSIKRIPASAASKFPMEPAPWKQM-KAGDS 344
Query: 397 SKASQCRDAEVRPRTASLYAYIERRGGGLEFLECNKDFRALR-ILEALHAKDA---KRQN 452
+ ++Y I++R LEF + KD RAL+ ILEA+ + ++
Sbjct: 345 A--------------LTVYGEIQKRLTQLEFKKSGKDLRALKQILEAMEKTQQLIDESRD 390
Query: 453 DGNGALTVAAQQAG---DALNTSSRHFQ-PPIVVMKPARSTEKQP---GVSLASVDPLAG 505
DG + T Q+ A + +R+F+ IVVMK A P V+L +V +
Sbjct: 391 DGTLSTTTLMQRTHKPVSAATSPARNFKSSSIVVMKSAAPVSTSPLPQNVTLPNVK-VGN 449
Query: 506 FRNLRKL 512
R RK+
Sbjct: 450 SRQTRKV 456
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.128 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,811,609
Number of extensions: 743208
Number of successful extensions: 2211
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2181
Number of HSP's successfully gapped: 8
Length of query: 940
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 832
Effective length of database: 8,145,641
Effective search space: 6777173312
Effective search space used: 6777173312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)