BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0595900 Os07g0595900|Os07g0595900
         (349 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69430.1  | chr1:26098025-26099077 FORWARD LENGTH=351          196   1e-50
AT1G26650.1  | chr1:9210335-9211342 FORWARD LENGTH=336            190   9e-49
AT5G61340.1  | chr5:24662064-24663044 REVERSE LENGTH=327           50   2e-06
AT4G16850.1  | chr4:9480699-9481640 FORWARD LENGTH=314             50   2e-06

>AT1G69430.1 | chr1:26098025-26099077 FORWARD LENGTH=351
          Length = 350

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 95/151 (62%), Positives = 117/151 (77%)

Query: 162 CLSSFLALLVTACSTLKFMLYPPDIVVCAGLLTVLAFSVAYAHTIIVCNLGGVIAVLEDI 221
           CL+SF   LV  CS+   + + PD      +L  L FSV +A+ II+CN   VI++LED+
Sbjct: 184 CLTSFCVFLVAVCSSFYVLGFSPDFNAYGAILVGLVFSVVFANAIIICNTTIVISILEDV 243

Query: 222 AGVSALRRSVQLMRGQTHVGLLIFLGSTIGLAFVEGLFEHRVKTLSYGDGSSRLWEGPLL 281
           +G  AL R+  L++GQT VGLLIFLGSTIGL FVEGLFEHRVK+LSYGDGSSRLWEGPLL
Sbjct: 244 SGPGALVRASDLIKGQTQVGLLIFLGSTIGLTFVEGLFEHRVKSLSYGDGSSRLWEGPLL 303

Query: 282 VLMYSFVMLIDSMMSVVFYFTCRSSSMEILD 312
           V+MYSFV+LID+MMS VFYF+CRS SME ++
Sbjct: 304 VVMYSFVVLIDTMMSAVFYFSCRSYSMEAVE 334



>AT1G26650.1 | chr1:9210335-9211342 FORWARD LENGTH=336
          Length = 335

 Score =  190 bits (483), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 97/160 (60%), Positives = 117/160 (73%), Gaps = 1/160 (0%)

Query: 162 CLSSFLALLVTACSTLKFMLYPPDIVVCAGLLTVLAFSVAYAHTIIVCNLGGVIAVLEDI 221
           C + F  LLV  CS+   + + PD  V   +L  LAFSV +A+ II+CN   VI+VLED+
Sbjct: 168 CFTFFCVLLVAICSSFSVLGFSPDFNVYGAMLVGLAFSVVFANAIIICNTAIVISVLEDV 227

Query: 222 AGVSALRRSVQLMRGQTHVGLLIFLGSTIGLAFVEGLFEHRVKTLSYGDGSSRLWEGPLL 281
           +G+ AL R+  L++GQ  VGLL+FLGST+GLAFVEGLF+HRVK +SYGDGSSRLWEGPLL
Sbjct: 228 SGLGALMRASDLIKGQIQVGLLMFLGSTLGLAFVEGLFDHRVKKVSYGDGSSRLWEGPLL 287

Query: 282 VLMYSFVMLIDSMMSVVFYFTCR-SSSMEILDDEGGSIEE 320
           VLMYSFV LIDSMMS VFYF+CR   SME    E   I E
Sbjct: 288 VLMYSFVTLIDSMMSAVFYFSCRVYYSMEASRGETQPIME 327



>AT5G61340.1 | chr5:24662064-24663044 REVERSE LENGTH=327
          Length = 326

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 5/101 (4%)

Query: 207 IVCNLGGVIAVLEDIAGVSALRRSVQLMRGQTHVGLLIFLGSTIGLAFVEGLFEHRVKTL 266
           ++ NL  V +      G + + ++  L+RG+    + + L + +GLA VE LF++RV   
Sbjct: 186 VISNLALVSSPSSSSGGYTNILKACLLIRGRNSTAMALALPTNLGLAGVEALFQYRVMR- 244

Query: 267 SYGDGSSRL----WEGPLLVLMYSFVMLIDSMMSVVFYFTC 303
           SY +G   +     EG  +  +Y+  +++D++++ +FY +C
Sbjct: 245 SYYNGDRDIISIALEGTFIAYLYALFLVLDTIVNFLFYQSC 285



>AT4G16850.1 | chr4:9480699-9481640 FORWARD LENGTH=314
          Length = 313

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 27/167 (16%)

Query: 163 LSSFLALLVTACSTLKFMLYPPDIVVCAGLLTVLAFSVAYAHTIIVCNLGGVIAVLEDIA 222
           +S FL+ LV    TL++            L+T+L   V   + + +  LG V++VLE+  
Sbjct: 158 ISMFLSALVGYTPTLRY------------LITILFLGVE-VYIMAITGLGFVVSVLEERY 204

Query: 223 GVSALRRSVQLMRGQTHVGL-----LIFLGSTIGLAFVEGLFEHRVKTLSYGDGSSRL-- 275
           G  A++    LM+G+   GL      +FL S IG   +E L +     LS G     +  
Sbjct: 205 GFDAIKEGTALMKGRRITGLALAGVFVFLSSFIGHG-MEKLAKELDMDLSSGSWWRSVVV 263

Query: 276 ---WEGPLLVLMYSFVMLIDSMMSVVFYFTCRS---SSMEILDDEGG 316
              W+G  LV MY   +++  ++  VFY  CR    +S  I+ DE G
Sbjct: 264 AGGWDGWKLVCMYGAEVVLSYVVITVFYCECRKRHGNSYAIVADEEG 310



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.329    0.140    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,897,150
Number of extensions: 152215
Number of successful extensions: 471
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 470
Number of HSP's successfully gapped: 6
Length of query: 349
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 250
Effective length of database: 8,392,385
Effective search space: 2098096250
Effective search space used: 2098096250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 112 (47.8 bits)