BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0581300 Os07g0581300|AK103439
         (658 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G45150.1  | chr1:17077615-17082330 REVERSE LENGTH=644          907   0.0  

>AT1G45150.1 | chr1:17077615-17082330 REVERSE LENGTH=644
          Length = 643

 Score =  907 bits (2343), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/636 (66%), Positives = 519/636 (81%), Gaps = 6/636 (0%)

Query: 22  PVEGVAGGGTSYGWVDGGLQASSLGNGAIDPTKIHSADLLHVWSMPSTANVSQQEAPRPL 81
           PVEGVAGGGT+YG+ D      S      DP+++ +ADL++VW MP+T NV  QE PR L
Sbjct: 12  PVEGVAGGGTAYGFNDAEPLKQS-----TDPSEVPTADLVNVWCMPNTVNVGSQETPRAL 66

Query: 82  EHVNLLAARNERESFQIALRPKVSWATSGIAGSVQVQCTDLCSSAGDRLVVGQSVTLRRV 141
           E +NLLAARNERESFQIA+RPKVSWA S  +G VQVQC+DLCSSAGDRLVVGQS+ LRRV
Sbjct: 67  EPINLLAARNERESFQIAMRPKVSWAASSPSGIVQVQCSDLCSSAGDRLVVGQSLKLRRV 126

Query: 142 VPMLGVPDALVPIDPLNSQINLLPGETSAIWVSLNVPCGQQPGLYEGEIFISAVRAEAES 201
           VP+LGVPDALVP+D   SQ++L PGETS IWVS++VP GQ PG YEGEI ISA++ +   
Sbjct: 127 VPVLGVPDALVPLDLPVSQLSLFPGETSVIWVSIDVPTGQPPGQYEGEIIISAMKTDGGG 186

Query: 202 RGESLTKSERYQLYKELRNCIDITEPRDYSSSEEMVQRLTSASTTLRRMLALPSFQDCQE 261
               L K E+ QL  EL  C+DI EP +    +E+V+R+  AS++LRR+L  PSF +   
Sbjct: 187 SSH-LAKHEKDQLCVELNTCLDIMEPIEGKPMDEVVERIKCASSSLRRILFSPSFSEFIS 245

Query: 262 NNGLGDMMDEDIMNNVAVRLKLSLTVWDFTLPLTPSLPAVFGISETVIEDRFCLEHGTKG 321
            NG  DMM+ED+++N+++R+KL LTVW+F +P+TPSLPAV G+S+TVIEDRF +EHG++ 
Sbjct: 246 TNGSTDMMEEDVVSNLSLRIKLRLTVWEFIIPVTPSLPAVIGVSDTVIEDRFAVEHGSED 305

Query: 322 WYDALDHHFRWLLQYRISPFFCRWGDSMRILAYTCPWPADHPKAKEYYSDPRLAAYAVPY 381
           WY  LD HF+WLLQYRISP+FC+WG+SMR+L YT PWPADHPK+ EY SD RLAAYAVPY
Sbjct: 306 WYKKLDLHFKWLLQYRISPYFCKWGESMRVLTYTSPWPADHPKSDEYLSDSRLAAYAVPY 365

Query: 382 APILSSTDAAKNSLRREVEILKSEAHWSKSYFYLWDEPLNMEQYDVICSISNELRSYASD 441
             +++  D+ ++ LR+EVEIL+S+ HW+K+YFYLWDEPLNME +D +  +++E+ +YA D
Sbjct: 366 RQVIAGDDSRESYLRKEVEILRSKPHWNKAYFYLWDEPLNMEHFDNVRKMASEIYAYAPD 425

Query: 442 VRILTTYYCGPSGSELAPSTFEAFVKVPNVLRPHTQIFCTSEWVLGTREDLVKDIVAELR 501
            R+LTTYYCGP  + LAP+ FE+FVKVPN+LRP+TQI+CTSEWVLG REDLVKDI+ EL+
Sbjct: 426 SRVLTTYYCGPGDAPLAPTPFESFVKVPNLLRPYTQIYCTSEWVLGNREDLVKDILDELQ 485

Query: 502 PDLGEEWWTYVCMGPSDPQPNWHLGMRGTQHRAVMWRVWKEGGTGFLYWGTNCYEKAMIP 561
            + GEEWWTY+C+GPSDP PNWHLGMRGTQ RAVMWRVWKEGGTGFLYWG NCYEKA +P
Sbjct: 486 TENGEEWWTYICLGPSDPHPNWHLGMRGTQQRAVMWRVWKEGGTGFLYWGANCYEKATVP 545

Query: 562 SAEICFRRGLPPGDGVLFYPGEVFSSSHEPVASTRLERILSGMQDIEYLKLYSSRYGREE 621
           SAE+ FRRGLPPGDGVL+YPGEVFSSS EPVAS RLER+LSG+QD EYLKLY S+YGREE
Sbjct: 546 SAEVKFRRGLPPGDGVLYYPGEVFSSSSEPVASLRLERLLSGLQDYEYLKLYESKYGREE 605

Query: 622 GLALLEKTGVYLGPDRYALDHGPIDVMRGEVYRTCR 657
            + LLEKTGVY GP+RY L+H PIDV+RGEVY TCR
Sbjct: 606 AMGLLEKTGVYTGPERYTLEHRPIDVLRGEVYNTCR 641



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.134    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,392,978
Number of extensions: 680681
Number of successful extensions: 1593
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1591
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 553
Effective length of database: 8,227,889
Effective search space: 4550022617
Effective search space used: 4550022617
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)