BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0580500 Os07g0580500|AK106748
(304 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19350.3 | chr1:6688680-6690165 FORWARD LENGTH=358 245 2e-65
AT1G75080.1 | chr1:28185709-28187063 FORWARD LENGTH=337 238 4e-63
AT3G50750.1 | chr3:18862147-18863062 REVERSE LENGTH=277 202 1e-52
AT4G36780.1 | chr4:17332989-17334212 REVERSE LENGTH=266 139 3e-33
AT1G78700.1 | chr1:29599854-29601539 FORWARD LENGTH=326 132 2e-31
AT4G18890.1 | chr4:10352774-10355259 FORWARD LENGTH=285 120 6e-28
AT5G45300.1 | chr5:18353636-18356696 FORWARD LENGTH=690 57 9e-09
AT2G45880.1 | chr2:18878674-18881824 REVERSE LENGTH=692 51 9e-07
>AT1G19350.3 | chr1:6688680-6690165 FORWARD LENGTH=358
Length = 357
Score = 245 bits (625), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 173/314 (55%), Gaps = 31/314 (9%)
Query: 16 RTPTWXXXXXXXXXXXXXXXXXXXXFTGLRALGNYNLPKHCDNNEVLKALCREAGWVVED 75
R P+W +TGLRA GNYNLPKHCDNNEVLKALC EAGWVVE+
Sbjct: 44 RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEE 103
Query: 76 DGTTYRKGCKPPPSSAGGASVGMSPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 135
DGTTYRKG KP P G+S +P
Sbjct: 104 DGTTYRKGHKPLPGDMAGSSSRATPYSSHNQSPLSSTFDSPILSYQVSPSSSSFPSPSRV 163
Query: 136 IDNPSASCLLPFLR--GLPN-LPPLRVSSSAPVTPPLSSPTASRPPKIRKPDWD------ 186
D + S + PFLR G+P+ LPPLR+S+SAPVTPP+SSPT+ P + P W+
Sbjct: 164 GDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVSSPTSRNPKPL--PTWESFTKQS 221
Query: 187 --------VDPFRHPFFAVSAPASPTRGRRLEHPDTIPECDESDVSTVDSGRWISFQM-- 236
+ +PF+AVSAPASPT R+ P TIPECDESD STVDSG WISFQ
Sbjct: 222 MSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAPATIPECDESDSSTVDSGHWISFQKFA 281
Query: 237 ------ATTAPTSPTYNLVNPGAS--TSNSMEIEGTAGRGGAEFEFDKGRVTPWEGERIH 288
A+ PTSPT+NLV P + N+ I+ +EF+F+ +V PWEGERIH
Sbjct: 282 QQQPFSASMVPTSPTFNLVKPAPQQLSPNTAAIQEIG--QSSEFKFENSQVKPWEGERIH 339
Query: 289 EVAAEELELTLGVG 302
+VA E+LELTLG G
Sbjct: 340 DVAMEDLELTLGNG 353
>AT1G75080.1 | chr1:28185709-28187063 FORWARD LENGTH=337
Length = 336
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 168/312 (53%), Gaps = 27/312 (8%)
Query: 16 RTPTWXXXXXXXXXXXXXXXXXXXXFTGLRALGNYNLPKHCDNNEVLKALCREAGWVVED 75
R P+W +TGLRA G+YNLPKHCDNNEVLKALC EAGWVVE+
Sbjct: 23 RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEE 82
Query: 76 DGTTYRKGCKPPPSSAGGASVGMSPCXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX 134
DGTTYRKGCKP P G S ++P
Sbjct: 83 DGTTYRKGCKPLPGEIAGTSSRVTPYSSQNQSPLSSAFQSPIPSYQVSPSSSSFPSPSRG 142
Query: 135 RIDNPSASCLLPFLR--GLPN-LPPLRVSSSAPVTPPLSSPTASRPPKIRKPDWD----- 186
+N +S PFLR G+P+ LP LR+S+S PVTPP+SSPT+ P + P+W+
Sbjct: 143 EPNNNMSSTFFPFLRNGGIPSSLPSLRISNSCPVTPPVSSPTSKNPKPL--PNWESIAKQ 200
Query: 187 --------VDPFRHPFFAVSAPASPTRGRRLEHPDTIPECDESDVSTVDSGRWISFQM-- 236
+ F +PF+AVSAPASPT + P TIPECDESD STVDSG WISFQ
Sbjct: 201 SMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPECDESDSSTVDSGHWISFQKFA 260
Query: 237 ------ATTAPTSPTYNLVNPGASTSNSMEIEGTAGRGGAEFEFDKGRVTPWEGERIHEV 290
A+ PTSPT+NLV P + +EF+F+ +V PWEGERIH+V
Sbjct: 261 QQQPFSASMVPTSPTFNLVKPAPQQMSPNTAAFQEIGQSSEFKFENSQVKPWEGERIHDV 320
Query: 291 AAEELELTLGVG 302
E+LELTLG G
Sbjct: 321 GMEDLELTLGNG 332
>AT3G50750.1 | chr3:18862147-18863062 REVERSE LENGTH=277
Length = 276
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/300 (43%), Positives = 158/300 (52%), Gaps = 43/300 (14%)
Query: 12 AAAGRTPTWXXXXXXXXXXXXXXXXXXXXFTGLRALGNYNLPKHCDNNEVLKALCREAGW 71
AA GR PTW FTGLR+ GNY LPKHCDNNEVLKALC EAGW
Sbjct: 10 AATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGW 69
Query: 72 VVEDDGTTYRKGCKPPPSSAGGASVGMSPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
+V +DGTTYRKG +P ++ +S+ +SP
Sbjct: 70 IVHEDGTTYRKGSRPTETTVPCSSIQLSP---------QSSAFQSPIPSYQASPSSSSYP 120
Query: 132 XXXRID-NPSASCLLPFLRGLP---NLPPLRVSSSAPVTPPLSSPTASRPPKIRKPDWDV 187
R D N S++ L+P+L+ L NL PLR+S+SAPVTPP+SSP S P R P W
Sbjct: 121 SPTRFDPNQSSTYLIPYLQNLASSGNLAPLRISNSAPVTPPISSPRRSNP---RLPRWQS 177
Query: 188 DPFRHPFFAVSAPASPTRGRRLEHPDTIPECDESDVSTVDSGRWISFQ---MATTAPTSP 244
F VSAP+SPTR RL H +IPECDESDVSTVDS RW +FQ ++ T P SP
Sbjct: 178 S-----NFPVSAPSSPTR--RLHHYTSIPECDESDVSTVDSCRWGNFQSVNVSQTCPPSP 230
Query: 245 TYNLVNPGASTSNSMEIEGTAGRGGAEFEFDKGRVTPWEGERIHEVAAEELELTLGVGAK 304
T+NLV S+ PWEGE+IH+V ++LELTLG K
Sbjct: 231 TFNLVGKSVSSVGVDVSV-----------------KPWEGEKIHDVGIDDLELTLGHNTK 273
>AT4G36780.1 | chr4:17332989-17334212 REVERSE LENGTH=266
Length = 265
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 16 RTPTWXXXXXXXXXXXXXXXXXXXXFTGLRALGNYNLPKHCDNNEVLKALCREAGWVVED 75
RTPTW ++GLRA GNY LPKHCDNNEVLKALC EAGW+VED
Sbjct: 16 RTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVED 75
Query: 76 DGTTYRKGCKPPPSSAGGASVGMSPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 135
DGTTYRKG KPP S G S
Sbjct: 76 DGTTYRKGFKPPASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSYHGSPVSSSFPSPSRY 135
Query: 136 IDNPSASCLLPFLRGL-----PNLPPLRVSSSAPVTPPLSSPTASRPPKIRKPDWDVDP- 189
NPS+ LLPFL + NLPPLR+S+SAPVTPPLSSPT SR K RK + P
Sbjct: 136 DGNPSSYLLLPFLHNIASSIPANLPPLRISNSAPVTPPLSSPT-SRGSK-RKLTSEQLPN 193
Query: 190 ------FRHPFFAVSAPA 201
RHP FA+SAP+
Sbjct: 194 GGSLHVLRHPLFAISAPS 211
>AT1G78700.1 | chr1:29599854-29601539 FORWARD LENGTH=326
Length = 325
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 146/352 (41%), Gaps = 90/352 (25%)
Query: 7 MTSGAAAAGRTPTWXXXXXXXXXXXXXXXXXXXXFTGLRALGNYNLPKHCDNNEVLKALC 66
MTSG R PTW FTGLR GNY LPKHCDNNEVLKALC
Sbjct: 1 MTSGT----RMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALC 56
Query: 67 REAGWVVEDDGTTYRKGCKPPPS--SAGGASVGMSPCXXXXXXXXXXXXXXXXXXXXXXX 124
EAGW+VE DGTTYRKGC P GG S SPC
Sbjct: 57 NEAGWIVEPDGTTYRKGCSRPVERMEIGGGSATASPC----SSYQPSPCASYNPSPGSSN 112
Query: 125 XXXXXXXXXXRIDNPSASCLLPFLRG--------------LPNLPPLRV---SSSAPVTP 167
+ + L+P+L+ LPN L + S SAPVTP
Sbjct: 113 FMSPASSSFANLTSGDGQSLIPWLKHLSTTSSSSASSSSRLPNY--LYIPGGSISAPVTP 170
Query: 168 PLSSPTASRPPKIRKPDWDVDPFRHPFFAVSAPASPTRGRRLEHPDTIPECDESDVSTVD 227
PLSSPTA R P++ DW + FF S P SPTR IP+ +
Sbjct: 171 PLSSPTA-RTPRMNT-DWQQ--LNNSFFVSSTPPSPTR-------QIIPDSE-------- 211
Query: 228 SGRWIS-FQMATTAPTSPTYNLVN------------------------PGASTSNSMEIE 262
W S Q+A + P SPT++LV+ PG S + S I
Sbjct: 212 ---WFSGIQLAQSVPASPTFSLVSQNPFGFKEEAASAAGGGGGSRMWTPGQSGTCSPAIP 268
Query: 263 GTAGRGGA----------EFEF---DKGRVTPWEGERIHEVA-AEELELTLG 300
A + EF F G V WEGERIHE + +++LELTLG
Sbjct: 269 PGADQTADVPMSEAVAPPEFAFGSNTNGLVKAWEGERIHEESGSDDLELTLG 320
>AT4G18890.1 | chr4:10352774-10355259 FORWARD LENGTH=285
Length = 284
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 133/307 (43%), Gaps = 41/307 (13%)
Query: 7 MTSGAAAAGRTPTWXXXXXXXXXXXXXXXXXXXXFTGLRALGNYNLPKHCDNNEVLKALC 66
MTSG RTPTW F GLR GN+ LPKHCDNNEVLKALC
Sbjct: 1 MTSGT----RTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALC 56
Query: 67 REAGWVVEDDGTTYRKGCKPPPS-SAGGASVGMSPCXXXXXXXXXXXXXXXXXXXXXXXX 125
EAGW VEDDGTTYRKGCKP S SPC
Sbjct: 57 NEAGWTVEDDGTTYRKGCKPMDRMDLMNGSTSASPCSSYQHSPRASYNPSPSSSSFPSPT 116
Query: 126 XXXXXXXXXRIDNP--SASCLLPFLRGLPNLPPLRV------SSSAPVTPPLS-SPTASR 176
NP A+ L+P+L+ L + P ++ S SAPVTPPL+ SPT
Sbjct: 117 ------------NPFGDANSLIPWLKNLSSNSPSKLPFFHGNSISAPVTPPLARSPTRD- 163
Query: 177 PPKIRKPD--WDVDPFRHPFFAVSAPASPTRGRRLEHPDTIPECDESDVSTVDSGRWISF 234
++ PD W + + P S P+SPT +P + + + +S W
Sbjct: 164 --QVTIPDSGW-LSGMQTP---QSGPSSPTFSLVSRNP--FFDKEAFKMGDCNSPMWTPG 215
Query: 235 QMATTAPTSPTYNLVNPGASTSNSMEIEGTAGRGGAEFEFDKGRVTPWEGERIH-EVAAE 293
Q +P P N ++ M E G G V PWEGERIH E ++
Sbjct: 216 QSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNAMA---ANGMVKPWEGERIHGECVSD 272
Query: 294 ELELTLG 300
+LELTLG
Sbjct: 273 DLELTLG 279
>AT5G45300.1 | chr5:18353636-18356696 FORWARD LENGTH=690
Length = 689
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 41 FTGLRALGNYNLPKHCDNNEVLKALCREAGWVVEDDGTTYRKGCKP 86
GLR GN+ LP D N+V+ AL REAGW VE DGTTYR+ +P
Sbjct: 111 LAGLRQYGNFPLPARADMNDVIAALAREAGWSVEADGTTYRQSQQP 156
>AT2G45880.1 | chr2:18878674-18881824 REVERSE LENGTH=692
Length = 691
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 43 GLRALGNYNLPKHCDNNEVLKALCREAGWVVEDDGTTY---RKGCKP 86
GLR GNYNL D N+V+ AL REAGWVV DGTT+ +G KP
Sbjct: 96 GLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQGTKP 142
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.132 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,431,077
Number of extensions: 266720
Number of successful extensions: 1445
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1428
Number of HSP's successfully gapped: 14
Length of query: 304
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 206
Effective length of database: 8,419,801
Effective search space: 1734479006
Effective search space used: 1734479006
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 111 (47.4 bits)