BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0577900 Os07g0577900|AK062833
         (121 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14600.1  | chr4:8376562-8378078 FORWARD LENGTH=138            127   1e-30
AT1G29060.1  | chr1:10147857-10149459 FORWARD LENGTH=135          124   1e-29

>AT4G14600.1 | chr4:8376562-8378078 FORWARD LENGTH=138
          Length = 137

 Score =  127 bits (319), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 77/96 (80%)

Query: 2   ANPLHGSGPLRSRNASSSDEIQLRIDPVHGDLDEEIDGLHSRVRLLKGVAQEINAEAKFQ 61
           A P      L +RNA+ S+EIQLRIDP+H DLD+EI GLH +VR LK +AQEI +EAKFQ
Sbjct: 18  AAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQVRQLKNIAQEIGSEAKFQ 77

Query: 62  NDFLSQLQMTLIKAQAGVKHNMRRMNKSIIQQGSNH 97
            DFL +LQMTLI+AQAGVK+N+R++N SII+ G+NH
Sbjct: 78  RDFLDELQMTLIRAQAGVKNNIRKLNMSIIRSGNNH 113



>AT1G29060.1 | chr1:10147857-10149459 FORWARD LENGTH=135
          Length = 134

 Score =  124 bits (310), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 77/96 (80%)

Query: 2   ANPLHGSGPLRSRNASSSDEIQLRIDPVHGDLDEEIDGLHSRVRLLKGVAQEINAEAKFQ 61
           A+P      L +RNAS S+EIQLRIDP+H DLD+EI GLH +VR LK +AQEI +EAK Q
Sbjct: 15  ADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVRQLKNIAQEIGSEAKSQ 74

Query: 62  NDFLSQLQMTLIKAQAGVKHNMRRMNKSIIQQGSNH 97
            DFL +LQMTLI+AQAGVK+N+R++N SII+ G+NH
Sbjct: 75  RDFLDELQMTLIRAQAGVKNNIRKLNLSIIRSGNNH 110



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.131    0.358 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,914,771
Number of extensions: 61501
Number of successful extensions: 206
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 206
Number of HSP's successfully gapped: 2
Length of query: 121
Length of database: 11,106,569
Length adjustment: 86
Effective length of query: 35
Effective length of database: 8,748,793
Effective search space: 306207755
Effective search space used: 306207755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 105 (45.1 bits)