BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0576000 Os07g0576000|AK072012
         (379 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G11945.2  | chr3:3780041-3782880 REVERSE LENGTH=394            496   e-141
AT2G18950.1  | chr2:8207491-8210047 FORWARD LENGTH=394            157   1e-38
AT3G51820.1  | chr3:19216301-19218934 REVERSE LENGTH=388           59   4e-09

>AT3G11945.2 | chr3:3780041-3782880 REVERSE LENGTH=394
          Length = 393

 Score =  496 bits (1277), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 242/312 (77%), Positives = 269/312 (86%)

Query: 68  AGAAGPAPLSKTLSDLKDSCWRFLRPHTIRGTALGSIALVARALIENPQLINWWLVFKAF 127
             A    P+   ++  +++CWRFLRPHTIRGTALGS ALV RALIEN  LI W LV KA 
Sbjct: 82  GAAESDDPVLDRIARFQNACWRFLRPHTIRGTALGSTALVTRALIENTHLIKWSLVLKAL 141

Query: 128 YGLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWLLVVLFAAAGFSIVV 187
            GL+ALICGNGYIVGINQIYDI IDKVNKPYLPIAAGDLSVQ+AWLLV+ FA AG  +V 
Sbjct: 142 SGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGLLVVG 201

Query: 188 TNFGPFITSLYCLGLFLGTIYSVPPFRLKRYPVAAFLIIATVRGFLLNFGVYYATRAALG 247
            NFGPFITSLY LGLFLGTIYSVPP R+KR+PVAAFLIIATVRGFLLNFGVY+ATRAALG
Sbjct: 202 FNFGPFITSLYSLGLFLGTIYSVPPLRMKRFPVAAFLIIATVRGFLLNFGVYHATRAALG 261

Query: 248 LTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAFLGSGLL 307
           L FQWS+PVAFIT FVTLFALVIAITKDLPDVEGDRK+QISTLATKLGVRNIAFLGSGLL
Sbjct: 262 LPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLL 321

Query: 308 IANYVAAIAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTKDAISQYYRFIWN 367
           + NYV+AI++AF MPQ FR ++M+P H  LA G+IFQTWVLE+A YTK+AIS YYRFIWN
Sbjct: 322 LVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTKEAISGYYRFIWN 381

Query: 368 LFYAEYIFFPLI 379
           LFYAEY+ FP +
Sbjct: 382 LFYAEYLLFPFL 393



>AT2G18950.1 | chr2:8207491-8210047 FORWARD LENGTH=394
          Length = 393

 Score =  157 bits (397), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 170/330 (51%), Gaps = 11/330 (3%)

Query: 57  SRRDAVRVCSQAG---AAGPAPLSKTLSDLKDSCWRFLRPHTIRGTALGSIALVARALIE 113
             +   RV + AG   A       K+  D  D+ +RF RPHT+ GT L SI  V+   +E
Sbjct: 67  KHKSRFRVNATAGQPEAFDSNSKQKSFRDSLDAFYRFSRPHTVIGTVL-SILSVSFLAVE 125

Query: 114 NPQLINWWLVFKAFYGLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWL 173
               I+  L       +VA +  N YIVG+NQ+ D+ IDKVNKPYLP+A+G+ SV T   
Sbjct: 126 KVSDISPLLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIA 185

Query: 174 LVVLFAAAGFSIV-VTNFGPFITSLYCLGLFLGTIYSV--PPFRLKRYPVAAFLIIATVR 230
           +V  F+   F +  +    P   +L+ +   LGT YS+  P  R KR+ + A + I  VR
Sbjct: 186 IVASFSIMSFWLGWIVGSWPLFWALF-VSFMLGTAYSINLPLLRWKRFALVAAMCILAVR 244

Query: 231 GFLLNFGVY-YATRAALGLTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQIST 289
             ++    Y +      G    ++ P+ F T F++ F++VIA+ KD+PD+EGD+ + I +
Sbjct: 245 AIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRS 304

Query: 290 LATKLGVRNIAFLGSGLLIANYVAAIAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLE 349
            +  LG + + +    LL   Y  AI V    P  + + + V  H  LA  +  +   ++
Sbjct: 305 FSVTLGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVD 364

Query: 350 QAKYTKDAISQYYRFIWNLFYAEYIFFPLI 379
            +  +K  I+  Y FIW LFYAEY+  P +
Sbjct: 365 LS--SKTEITSCYMFIWKLFYAEYLLLPFL 392



>AT3G51820.1 | chr3:19216301-19218934 REVERSE LENGTH=388
          Length = 387

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 43/217 (19%)

Query: 135 CGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLS----VQTAWLLVVLFAAAGFSIVV--T 188
           C  GY   IN  YD  ID +N+PY PI +G +S    +   W+L++        + V   
Sbjct: 146 CLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAG 205

Query: 189 NFGPFITSLYCLGLFLGTIYSVPPFRLKRYPVAAFLIIATVRGFLLNFGV--------YY 240
           +  P +  L   G  L  IYS PP +LK+             G++ NF +        ++
Sbjct: 206 HTTPTVFYLALGGSLLSYIYSAPPLKLKQ------------NGWVGNFALGASYISLPWW 253

Query: 241 ATRAALGLTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIA 300
           A +A  G     +  V  +T   ++  L IAI  D   VEGDR   + +L    G     
Sbjct: 254 AGQALFGTL---TPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAK 310

Query: 301 FLGSG------LLIANYVAAIA--------VAFLMPQ 323
           ++  G      L +A Y+ A          VA ++PQ
Sbjct: 311 WICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQ 347



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.330    0.141    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,057,180
Number of extensions: 260400
Number of successful extensions: 681
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 676
Number of HSP's successfully gapped: 3
Length of query: 379
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 279
Effective length of database: 8,364,969
Effective search space: 2333826351
Effective search space used: 2333826351
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 112 (47.8 bits)