BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0573700 Os07g0573700|AK070473
(356 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35335.1 | chr4:16807286-16810015 FORWARD LENGTH=353 522 e-148
AT5G41760.1 | chr5:16706978-16709204 FORWARD LENGTH=341 201 7e-52
AT2G43240.1 | chr2:17971280-17975300 REVERSE LENGTH=407 135 3e-32
AT3G59360.1 | chr3:21935826-21939642 REVERSE LENGTH=406 134 5e-32
AT5G65000.1 | chr5:25965123-25967307 REVERSE LENGTH=326 69 5e-12
>AT4G35335.1 | chr4:16807286-16810015 FORWARD LENGTH=353
Length = 352
Score = 522 bits (1344), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/352 (74%), Positives = 281/352 (79%), Gaps = 3/352 (0%)
Query: 1 MEYRRVKDQESYDVVSQKDIES-PGERXXXXXXXXXXXXXXXXXXXXNSWKLKXXXXXXX 59
MEYR++KD++ +DV S DIES G+ +WK K
Sbjct: 1 MEYRKIKDEDDHDVAS--DIESVKGKSHTVASSNIAMATLGVGSSERINWKRKGVVTCAL 58
Query: 60 XXXXXXXXXXXVWSKRAGKYEYSVTTANFSVEALKCLLSLIALYRTWNSQGVTEDNRLST 119
VWSKRAGKYEYSVTTANF V LKC LSL+AL R W ++GVT+DNRLST
Sbjct: 59 TILTSSQAILIVWSKRAGKYEYSVTTANFLVGTLKCALSLLALTRIWKNEGVTDDNRLST 118
Query: 120 SFDEVSVYPIPAILYMVKNLLQYYIFAYVDAPAYQILKNLNIISTGVLYRIILKKKLSEI 179
+FDEV V+PIPA LY+ KNLLQYYIFAYVDAP YQILKNLNIISTGVLYRIILK+KLSEI
Sbjct: 119 TFDEVKVFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKRKLSEI 178
Query: 180 QWAAFILLCAGCTTAQLNPSSDHVLQTPIQGWVMAIVMALLSGFAGVYTEAIIKKRPSRN 239
QWA FILLC GCTTAQLN +SD VLQT + GW MAIVMALLSGFAGVYTEAIIKKRPSRN
Sbjct: 179 QWAGFILLCCGCTTAQLNSNSDRVLQTSLPGWTMAIVMALLSGFAGVYTEAIIKKRPSRN 238
Query: 240 INVQNFWLYIFGMLFNLVAICVQDFDAVMNKGFFHGYSFITVLMILNHALSGIAVSMVMK 299
INVQNFWLY+FGM FN VAI +QDFDAV NKGFFHGYSFIT+LMILNHALSGIAVSMVMK
Sbjct: 239 INVQNFWLYVFGMAFNAVAIVIQDFDAVANKGFFHGYSFITLLMILNHALSGIAVSMVMK 298
Query: 300 YADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSVSVYLHSVGK 351
YADNIVKVYSTSVAMLLTAVVSVFLF FHLSLAFFLGSTVVSVSVYLHS GK
Sbjct: 299 YADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVYLHSAGK 350
>AT5G41760.1 | chr5:16706978-16709204 FORWARD LENGTH=341
Length = 340
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 174/284 (61%), Gaps = 11/284 (3%)
Query: 73 SKRAGKYEYSVTTANFSVEALKCLLSLIALYRTWNSQGVTEDNRLSTSFDEVSVYPIPAI 132
S+ G Y+Y T F E K ++S + L+R + +R++T + V ++ IP++
Sbjct: 27 SQSDGGYKYDYATVPFLAEVFKLIISGLFLWRE-MRTSSSTTSRITTDWKSVRLFVIPSL 85
Query: 133 LYMVKNLLQYYIFAYVDAPAYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCAGCT 192
+Y++ N +Q+ YVD YQI+ NL I++TG+L+R+ LK+KLS++QW A LL G T
Sbjct: 86 IYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLKRKLSKLQWMAIGLLAVGTT 145
Query: 193 TAQL----NPSSDHVLQTPIQGWVMAIVMALLSGFAGVYTEAIIKKRPSRNINVQNFWLY 248
T+Q+ S D + PIQG+++ I+ A LS AG+YTE ++ KR + + QN LY
Sbjct: 146 TSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYTEFLM-KRNNDTLYWQNLQLY 204
Query: 249 IFGMLFNLVAICVQDFDAVMNKG-----FFHGYSFITVLMILNHALSGIAVSMVMKYADN 303
FG LFN+ + DF KG F GYS T L++LN +G+ VS +MKYADN
Sbjct: 205 TFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVVLNLGSTGLLVSWLMKYADN 264
Query: 304 IVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSVSVYLH 347
IVKVYSTS+AMLLT V S++LF F +L FLG + +S++++
Sbjct: 265 IVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSLHMY 308
>AT2G43240.1 | chr2:17971280-17975300 REVERSE LENGTH=407
Length = 406
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 149/287 (51%), Gaps = 18/287 (6%)
Query: 73 SKRAGKYEYSVTTANFSVEALKCLLSLIALYRTWNSQGVTEDNRLS-TSFDEVS----VY 127
SK GK+ +S + NF E K + +++ L Q V E LS ++F + + +
Sbjct: 65 SKVDGKFNFSPISVNFLTEIAKVIFAMVMLLFQARHQKVGEKPLLSLSTFVQAARNNMLL 124
Query: 128 PIPAILYMVKNLLQYYIFAYVDAPAYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILL 187
+PA LY + N L++ + Y + ++L NL ++ VL ++I+K++ S IQW A LL
Sbjct: 125 AVPAGLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMIMKRRFSIIQWEALALL 184
Query: 188 CAGCTTAQLN--PSSDHVLQTPIQ--GWVMAIVMALLSGFAGVYTEAIIKKRPSRNINVQ 243
G + QL P + PI ++ + + A VY E +K + +I +Q
Sbjct: 185 LIGISINQLRSLPEGATTVAVPIATGAYICTFIFVTVPSLASVYNEYALKSQYDTSIYLQ 244
Query: 244 NFWLYIFGMLFNLVAICVQDFDAVMNKG-----FFHGYSFITVLMILNHALSGIAVSMVM 298
N +LY +G +FN + I V+ KG G+S T+ +ILN+A GI S
Sbjct: 245 NLFLYGYGAIFNFLGI----LGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFF 300
Query: 299 KYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSVSVY 345
KYAD I+K YS++VA + T + S LFG L++ F LG ++V +S++
Sbjct: 301 KYADTILKKYSSTVATIFTGIASAALFGHILTMNFLLGISIVFISMH 347
>AT3G59360.1 | chr3:21935826-21939642 REVERSE LENGTH=406
Length = 405
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 150/287 (52%), Gaps = 18/287 (6%)
Query: 73 SKRAGKYEYSVTTANFSVEALKCLLSLIALYRTWNSQGVTEDNRLSTS-FDEVS----VY 127
SK GK+ +S + NF E K + +++ L Q V E LS S F + + +
Sbjct: 63 SKVDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNVLL 122
Query: 128 PIPAILYMVKNLLQYYIFAYVDAPAYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILL 187
+PA+LY + N L++ + Y + ++L NL ++ VL ++++K++ S IQW A LL
Sbjct: 123 AVPALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSIIQWEALALL 182
Query: 188 CAGCTTAQLN--PSSDHVLQTPIQ--GWVMAIVMALLSGFAGVYTEAIIKKRPSRNINVQ 243
G + QL P + P+ +V ++ + A V+ E +K + +I +Q
Sbjct: 183 LIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKSQYDTSIYLQ 242
Query: 244 NFWLYIFGMLFNLVAICVQDFDAVMNKG-----FFHGYSFITVLMILNHALSGIAVSMVM 298
N +LY +G +FN + I V+ KG G+S T+ +ILN+A GI S
Sbjct: 243 NLFLYGYGAIFNFLGI----LGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFF 298
Query: 299 KYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSVSVY 345
KYAD I+K YS++VA + T + S LFG +++ F LG ++V +S++
Sbjct: 299 KYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMH 345
>AT5G65000.1 | chr5:25965123-25967307 REVERSE LENGTH=326
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 15/257 (5%)
Query: 73 SKRAGKYEYSVTTANFSVEALKCLLSLIALYRTWNSQGVTEDNRLSTSFDEVSVYPIPAI 132
SKR + + VT++ + E +K + +LI + R + +G+ ++ L ++ +PA
Sbjct: 35 SKRCIRKDVIVTSSVLTCEIVKVICALILMARNGSLKGLAKEWTL---MGSLTASGLPAA 91
Query: 133 LYMVKNLLQYYIFAYVDAPAYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCAGCT 192
+Y ++N L + +D+ + IL I T IIL++K S +Q A LL
Sbjct: 92 IYALQNSLLQISYRSLDSLTFSILNQTKIFFTAFFTFIILRQKQSILQIGALCLLIMAAV 151
Query: 193 TAQLNPSSD------HVLQTPIQGWVMAIVMALLSGFAGVYTE--AIIKKRPSRNINVQN 244
+ S+ + Q G + + ++LSG A + + +KK S + V+
Sbjct: 152 LLSVGEGSNKDSSGINADQKLFYGIIPVLAASVLSGLASSLCQWASQVKKHSSYLMTVE- 210
Query: 245 FWLYIFGMLFNLVA-ICVQDFDAVMNKGFFHGYSFITVLMILNHALSGIAVSMVMKYADN 303
+ I G L LV+ + D +A+ GFFHG++ +T++ ++++AL GI V +V +A
Sbjct: 211 --MSIVGSLCLLVSTLKSPDGEAIKKYGFFHGWTALTLVPVISNALGGILVGLVTSHAGG 268
Query: 304 IVKVYSTSVAMLLTAVV 320
+ K + A+L+TA++
Sbjct: 269 VRKGFVIVSALLVTALL 285
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,387,580
Number of extensions: 224032
Number of successful extensions: 671
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 661
Number of HSP's successfully gapped: 5
Length of query: 356
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 256
Effective length of database: 8,364,969
Effective search space: 2141432064
Effective search space used: 2141432064
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)