BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0573600 Os07g0573600|AK073925
         (131 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12400.1  | chr1:4222296-4222603 FORWARD LENGTH=72             122   4e-29
AT1G62886.1  | chr1:23294413-23294710 FORWARD LENGTH=73            96   4e-21

>AT1G12400.1 | chr1:4222296-4222603 FORWARD LENGTH=72
          Length = 71

 Score =  122 bits (307), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 54/70 (77%), Positives = 63/70 (90%)

Query: 62  MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKISEF 121
           MVNAIKG+F+SCD+PM QFIVN+N SMP S KFI+H+LD TH+FVQPHV +MIRS IS+F
Sbjct: 1   MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60

Query: 122 RDQNSYEKPT 131
           RDQNSYEKPT
Sbjct: 61  RDQNSYEKPT 70



>AT1G62886.1 | chr1:23294413-23294710 FORWARD LENGTH=73
          Length = 72

 Score = 96.3 bits (238), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 2/70 (2%)

Query: 62  MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHM--LDPTHMFVQPHVAEMIRSKIS 119
           MVN+IKG+FISCDVPMAQFI +LN S+PAS KFI+ +  LD T MFV+P+  EMIR  + 
Sbjct: 1   MVNSIKGVFISCDVPMAQFIAHLNNSLPASQKFIIQVLKLDTTSMFVKPYAEEMIRDAVI 60

Query: 120 EFRDQNSYEK 129
           +FRD+NSY K
Sbjct: 61  KFRDENSYAK 70



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.323    0.131    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,068,977
Number of extensions: 66754
Number of successful extensions: 195
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 194
Number of HSP's successfully gapped: 2
Length of query: 131
Length of database: 11,106,569
Length adjustment: 87
Effective length of query: 44
Effective length of database: 8,721,377
Effective search space: 383740588
Effective search space used: 383740588
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 106 (45.4 bits)