BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0572600 Os07g0572600|AK109147
(557 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17270.1 | chr1:5909443-5911624 REVERSE LENGTH=565 566 e-161
AT5G50420.1 | chr5:20530453-20532635 REVERSE LENGTH=567 551 e-157
AT1G53770.2 | chr1:20071460-20073708 REVERSE LENGTH=602 530 e-150
>AT1G17270.1 | chr1:5909443-5911624 REVERSE LENGTH=565
Length = 564
Score = 566 bits (1458), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/457 (60%), Positives = 351/457 (76%), Gaps = 11/457 (2%)
Query: 106 ELRALYLLRSQRSGLLALFNRTAAPTNGSSSGSNAVSYADLHDALLGQIKINREIQAALL 165
EL+AL LLR Q+ L++L NRT N S++ S++V ++ ALL QI +N+EI+ LL
Sbjct: 110 ELQALNLLRQQQLALVSLLNRTNF--NSSNAISSSVVIDNVKAALLKQISVNKEIEEVLL 167
Query: 166 SAHRTG--AAGNATEDGLDLDLPADGCRRRELPS-NRRTIEWNPKKDRFLFAICVSGQMS 222
S HRTG + + D AD CR+ + +R+TIEW P+ D+FLFAIC+SGQMS
Sbjct: 168 SPHRTGNYSITASGSDSFTGSYNADICRKVDQKLLDRKTIEWKPRPDKFLFAICLSGQMS 227
Query: 223 NHLICLEKHMFFAALLGRILVVPSQKLDYQYDRVLDINHINDCIGRKVVITYEEFTE--K 280
NHLICLEKHMFFAALL R+LV+PS K DYQYD+V+DI IN C+GR VVI++++F E K
Sbjct: 228 NHLICLEKHMFFAALLDRVLVIPSSKFDYQYDKVIDIERINTCLGRTVVISFDQFKEIDK 287
Query: 281 RKKVSIDQFICYAASP-PCFIDEDHVXXXXXXXXXXX-XXQAAWPEDAKLKEPKKRFVED 338
+ ID+FICY +SP PC++DEDH+ +A W ED +K+P KR ++
Sbjct: 288 KNNAHIDRFICYVSSPQPCYVDEDHIKKLKGLGVSIGGKLEAPWSED--IKKPTKRTSQE 345
Query: 339 IMPKFTTDAEVLAIGDMFYADVEEEWVMQPGGPLAHKCNTLIQPSRLIMLTAQRFVQTFL 398
++ KF +D V+AIGD+FYAD+E++ VMQPGGP+ HKC TLI+PSRLI++TAQRF+QTFL
Sbjct: 346 VVEKFKSDDGVIAIGDVFYADMEQDLVMQPGGPINHKCKTLIEPSRLILVTAQRFIQTFL 405
Query: 399 GGNYIALHFRRHGFLKFCNVKKESCFFPIPQAAECILRIVEKANAPVIYLSTDAAESETS 458
G N+I+LH RRHGFLKFCN K SCF+PIPQAA+CI R+VE+ANAPVIYLSTDAAESET
Sbjct: 406 GKNFISLHLRRHGFLKFCNAKSPSCFYPIPQAADCISRMVERANAPVIYLSTDAAESETG 465
Query: 459 LLQSLVVFNDRQVPLVKRPEHHNSEKWDALLYRNHMGGDNQVEAMLDKTICALSNVFIGA 518
LLQSLVV + + VPLVKRP +++EKWD+LLYR+ + D+QV AMLDKTICA+S+VFIGA
Sbjct: 466 LLQSLVVVDGKVVPLVKRPPQNSAEKWDSLLYRHGIEDDSQVYAMLDKTICAMSSVFIGA 525
Query: 519 SGSTFTEDILRLRRGWGSASHCDEYLCQGELPNFIAE 555
SGSTFTEDILRLR+ WG++S CDEYLC+GE PNFIAE
Sbjct: 526 SGSTFTEDILRLRKDWGTSSMCDEYLCRGEEPNFIAE 562
>AT5G50420.1 | chr5:20530453-20532635 REVERSE LENGTH=567
Length = 566
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/422 (62%), Positives = 331/422 (78%), Gaps = 8/422 (1%)
Query: 139 NAVSYADLHDALLGQIKINREIQAALLSAHRTGAAGNATEDGLDLDLPADGCRRRELP-S 197
++V + D+ A+ QI +N+EIQ LLS HR+ T D ++ + CR+ + S
Sbjct: 146 SSVLFEDVKSAVSKQISLNKEIQEVLLSPHRSSNYSGGT-DVDSVNFSYNRCRKVDQKLS 204
Query: 198 NRRTIEWNPKKDRFLFAICVSGQMSNHLICLEKHMFFAALLGRILVVPSQKLDYQYDRVL 257
+R+T+EW P+ D+FLFAIC+SGQMSNHLICLEKHMFFAALL R+LV+PS K DYQYDRV+
Sbjct: 205 DRKTVEWKPRSDKFLFAICLSGQMSNHLICLEKHMFFAALLDRVLVIPSSKFDYQYDRVI 264
Query: 258 DINHINDCIGRKVVITYEEFTEKRKK--VSIDQFICYAASPP-CFIDEDHVXXXXXXXXX 314
DI IN C+GR VV+ +++F EK KK ID+FICY +SP C++DE+H+
Sbjct: 265 DIERINTCLGRNVVVAFDQFKEKAKKNHFRIDRFICYFSSPQLCYVDEEHIKKLKGLGIS 324
Query: 315 XX-XXQAAWPEDAKLKEPKKRFVEDIMPKFTTDAEVLAIGDMFYADVEEEWVMQPGGPLA 373
+A W ED +K+P KR V+D+ KF +D +V+AIGD+FYAD+E++WVMQPGGP+
Sbjct: 325 IDGKLEAPWSED--IKKPSKRTVQDVQMKFKSDDDVIAIGDVFYADMEQDWVMQPGGPIN 382
Query: 374 HKCNTLIQPSRLIMLTAQRFVQTFLGGNYIALHFRRHGFLKFCNVKKESCFFPIPQAAEC 433
HKC TLI+PS+LI+LTAQRF+QTFLG N+IALHFRRHGFLKFCN K SCF+PIPQAAEC
Sbjct: 383 HKCKTLIEPSKLILLTAQRFIQTFLGKNFIALHFRRHGFLKFCNAKSPSCFYPIPQAAEC 442
Query: 434 ILRIVEKANAPVIYLSTDAAESETSLLQSLVVFNDRQVPLVKRPEHHNSEKWDALLYRNH 493
I RIVE++N VIYLSTDAAESETSLLQSLVV + + VPLVKRP +++EKWDALLYR+
Sbjct: 443 IARIVERSNGAVIYLSTDAAESETSLLQSLVVVDGKIVPLVKRPPRNSAEKWDALLYRHG 502
Query: 494 MGGDNQVEAMLDKTICALSNVFIGASGSTFTEDILRLRRGWGSASHCDEYLCQGELPNFI 553
+ D+QV+AMLDKTICA+S+VFIGASGSTFTEDILRLR+ WG++S CDEYLC+GE PNFI
Sbjct: 503 IEDDSQVDAMLDKTICAMSSVFIGASGSTFTEDILRLRKDWGTSSTCDEYLCRGEEPNFI 562
Query: 554 AE 555
AE
Sbjct: 563 AE 564
>AT1G53770.2 | chr1:20071460-20073708 REVERSE LENGTH=602
Length = 601
Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/498 (54%), Positives = 336/498 (67%), Gaps = 62/498 (12%)
Query: 106 ELRALYLLRSQRSGLLALFNRTAAPTNGSSSGSNAVSYADLHDALLGQIKINREIQAALL 165
+L+ALYLLR Q S L +++N T SN + D+ A+ QI +NR+IQ ALL
Sbjct: 116 DLQALYLLRKQESDLFSIWNHTV---------SNLSTIDDVKSAVFRQISLNRQIQNALL 166
Query: 166 SAHRTGAAG-NATEDGLDLDLPADGCRRRELPSN-RRTIEWNPKKDRFLFAICVSGQMSN 223
S H+TG + DG CR+ + N R+TI+W P+ D+FLFAIC+SGQMSN
Sbjct: 167 SPHKTGNVDIGGSSDGY---FAGGSCRKVDQKLNGRKTIQWKPRPDKFLFAICLSGQMSN 223
Query: 224 HLICLEKHMFFAALLGRILVVPSQKLDYQYDRVLDINHINDCIGRKVVITYEEFTEK--- 280
HLICLEKHMFFAALL R+LV+PS + DY Y R++DI+ IN C+GR VV+++EEF +K
Sbjct: 224 HLICLEKHMFFAALLKRVLVIPSHRFDYHYSRIIDIDRINTCLGRTVVVSFEEFWKKDKN 283
Query: 281 RKK---VSIDQFICYAASP-PCFIDEDHVXXXXXXXXXXX-XXQAAWPEDAKLKEPKKRF 335
RKK V I++FICY + P PC++D++H+ W ED + P +
Sbjct: 284 RKKHHHVHINRFICYFSKPEPCYVDKEHITKLKALGITVGGKLDTPWEED--IARPSNKT 341
Query: 336 VEDIMPKFTTDAEVLAIGDMFYADVEEEWVMQPGGPLAHKCNTLIQPSRLIMLTAQRFVQ 395
E++ F +D +V+AIGD+FYA+VE EWVMQPGGP+AHKC TLI+P+RLI+LTAQRF+Q
Sbjct: 342 AEEVEANFRSDDDVIAIGDVFYANVEREWVMQPGGPVAHKCRTLIEPNRLILLTAQRFIQ 401
Query: 396 TFLGGNYIALHFRRHGFLKF--------------------------------------CN 417
TFLG NYIALHFRRHGFLKF N
Sbjct: 402 TFLGKNYIALHFRRHGFLKFWYDLFSTSLLHSTFDDNVVHFITKIKSGTLAKKFSWCASN 461
Query: 418 VKKESCFFPIPQAAECILRIVEKANAPVIYLSTDAAESETSLLQSLVVFNDRQVPLVKRP 477
K SCFFPIPQAA CI R++EK APV+YLSTDAAESET LLQSL++ N + VPLVKRP
Sbjct: 462 AKNPSCFFPIPQAASCITRLIEKVEAPVLYLSTDAAESETGLLQSLLILNGKTVPLVKRP 521
Query: 478 EHHNSEKWDALLYRNHMGGDNQVEAMLDKTICALSNVFIGASGSTFTEDILRLRRGWGSA 537
++EKWDALLYR+ + GD+QVEAMLDKTICALS+VFIGASGSTFTEDILRLR+ WG+A
Sbjct: 522 ARDSAEKWDALLYRHGLEGDSQVEAMLDKTICALSSVFIGASGSTFTEDILRLRKDWGTA 581
Query: 538 SHCDEYLCQGELPNFIAE 555
S CDEYLC E PNFIA+
Sbjct: 582 SECDEYLCANEQPNFIAD 599
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,857,031
Number of extensions: 427685
Number of successful extensions: 844
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 830
Number of HSP's successfully gapped: 4
Length of query: 557
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 453
Effective length of database: 8,255,305
Effective search space: 3739653165
Effective search space used: 3739653165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)