BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0557500 Os07g0557500|AK101830
(693 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09060.3 | chr1:2921235-2925254 REVERSE LENGTH=945 153 3e-37
AT1G11950.1 | chr1:4034747-4038310 REVERSE LENGTH=876 122 5e-28
AT1G62310.1 | chr1:23036039-23039301 REVERSE LENGTH=884 114 2e-25
AT4G21430.1 | chr4:11407835-11412159 REVERSE LENGTH=928 111 1e-24
AT3G07610.3 | chr3:2426148-2432876 FORWARD LENGTH=1050 108 1e-23
AT4G00990.1 | chr4:427035-431535 FORWARD LENGTH=841 94 3e-19
AT2G22840.1 | chr2:9728841-9731141 FORWARD LENGTH=531 49 9e-06
>AT1G09060.3 | chr1:2921235-2925254 REVERSE LENGTH=945
Length = 944
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 196/438 (44%), Gaps = 72/438 (16%)
Query: 280 GDSPPPLPDHLRCRRSDGKKWRCQNRALPTVSFCEYHY-----------SRAN--KGKKP 326
G+S P +PD LRC+RSDGK+WRC ++ + CE HY RAN K K+
Sbjct: 32 GESIPGIPDDLRCKRSDGKQWRCTAMSMADKTVCEKHYIQAKKRAANSAFRANQKKAKRR 91
Query: 327 PADGEV--LAVALXXXXXXXXXXXXXVNXXXXXXXXXXXDVTRDLPNGLMRISPGSSEPA 384
+ GE + N + + LMR SP + P
Sbjct: 92 SSLGETDTYSEGKMDDFELPVTSIDHYNNGLASASKSNGRLEKRHNKSLMRYSPET--PM 149
Query: 385 ASLPSP-----VTTKVGVDIPVPTQ--RCYRS----------KNAEPMPVGPVKVVPRAM 427
SP + +G D+ + + R YR+ +N P++ +
Sbjct: 150 MRSFSPRVAVDLNDDLGRDVVMFEEGYRSYRTPPSVAVMDPTRNRSHQSTSPMEYSAAST 209
Query: 428 GMS-KAGQKTCHRCGMKKAARIVQCKNCDNRYFCNSCINKWYSGLSKKDIKTRCPVCRGS 486
+S ++ + CH+C K RI+ C C+ R FC++C++ YS +S ++++ CP CRG
Sbjct: 210 DVSAESLGEICHQCQRKDRERIISCLKCNQRAFCHNCLSARYSEISLEEVEKVCPACRGL 269
Query: 487 CGCKQCTLGQTKGAISKESSGDQDKLISIKICNHQLYKL----LPV--ELNQEQLDELEI 540
C CK C + DKL LY+L LPV +++ EQ E+E+
Sbjct: 270 CDCKSCLRSDNTIKVRIREIPVLDKL-------QYLYRLLSAVLPVIKQIHLEQCMEVEL 322
Query: 541 EAKIQETKISDVRVQV-ADEQSGSLDCNNCKLSVHRFLRSCPRCPFKLCLSCCQKIRDGN 599
E +++E +I VR ++ ADEQ + CN C++ V + R CP C + LCL CCQ +R+ +
Sbjct: 323 EKRLREVEIDLVRARLKADEQ---MCCNVCRIPVVDYYRHCPNCSYDLCLRCCQDLREES 379
Query: 600 ---ISAAT---------PEDKFNQRL-LQQESAHEDGSISCPSIELGGCGDSLLNLVYVP 646
IS P+ K N + A+ DGSI CP E GGCG LNL +
Sbjct: 380 SVTISGTNQNVQDRKGAPKLKLNFSYKFPEWEANGDGSIPCPPKEYGGCGSHSLNLARIF 439
Query: 647 PSD-------QSEEVSSG 657
+ +EE+ SG
Sbjct: 440 KMNWVAKLVKNAEEIVSG 457
>AT1G11950.1 | chr1:4034747-4038310 REVERSE LENGTH=876
Length = 875
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 123/254 (48%), Gaps = 33/254 (12%)
Query: 423 VPRAMGMSKAGQKTCHRCGMKKAARIVQCKNCDNRYFCNSCINKWYSGLSKKDIKTRCPV 482
+ R++ + CH+C + + C C+ R +C CI KWY LS DI +CP
Sbjct: 179 MTRSLKANLGELAICHQCSKGERRYLFICTFCEVRLYCFPCIKKWYPHLSTDDILEKCPF 238
Query: 483 CRGSCGCKQCTLGQTKGAISKESSGDQDKLISIKICNHQLYKLLPV--ELNQEQLDELEI 540
CRG+C C CT + G I + S DK + +LP +L + Q E+E
Sbjct: 239 CRGTCNC--CTCLHSSGLI-ETSKRKLDKYERFYHLRFLIVAMLPFLKKLCKAQDQEIET 295
Query: 541 EAKIQETKISDVRVQVAD-EQSGSLDCNNCKLSVHRFLRSCPRCPFKLCLSCCQKIRDGN 599
EAK+Q++ S V + + + CN+C S+ RSCP+C ++LCL+CCQ+IR G
Sbjct: 296 EAKVQDSMASQVDISESLCSNEERVFCNHCATSIVDLHRSCPKCSYELCLNCCQEIRGGW 355
Query: 600 IS--------------------AATP------EDKFNQRLLQQESAHEDGSISCPSIELG 633
+S AA P ED+ ++ +A E+GSI C ELG
Sbjct: 356 LSDRPECQLQFEYRGTRYIHGEAAEPSSSSVSEDETKTPSIKW-NADENGSIRCAPKELG 414
Query: 634 GCGDSLLNLVYVPP 647
GCGDS+L L + P
Sbjct: 415 GCGDSVLELKRILP 428
>AT1G62310.1 | chr1:23036039-23039301 REVERSE LENGTH=884
Length = 883
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 35/242 (14%)
Query: 437 CHRCGMKKAARIVQCKNCDNRYFCNSCINKWYSGLSKKDIKTRCPVCRGSCGCKQCTLGQ 496
CH+C + ++ C C+ FC CI KWY LS+ D+ +CP+CR +C C +C
Sbjct: 209 CHQCLKGERITLLICSECEKTMFCLQCIRKWYPNLSEDDVVEKCPLCRQNCNCSKCLHLN 268
Query: 497 TKGAISKESSGDQDKLISIKICNHQLYKLLPV--ELNQEQLDELEIEAKIQETKISDVRV 554
SK ++ ++ + + +LP +L+ Q E+E EA +Q S+V +
Sbjct: 269 GLIETSKRELAKSERRHHLQ---YLITLMLPFLNKLSIFQKLEIEFEATVQGKLPSEVEI 325
Query: 555 QVADEQSGS-LDCNNCKLSVHRFLRSCPRCPFKLCLSCCQKIRDGNISAATPEDKFN--- 610
A + + C++C S+ RSCP+C ++LCL CCQ+IR+G++S PE KF+
Sbjct: 326 TAAISYTDERVYCDHCATSIVDLHRSCPKCSYELCLKCCQEIREGSLSER-PEMKFHYVD 384
Query: 611 --QRLLQ-----------------------QESAHEDGSISCPSIELGGCGDSLLNLVYV 645
R + + S E+GSI+C +LGGCG+ +L L +
Sbjct: 385 RGHRYMHGLDAAEPSLSSTFEDEEANPSDAKWSLGENGSITCAPEKLGGCGERMLELRRI 444
Query: 646 PP 647
P
Sbjct: 445 LP 446
>AT4G21430.1 | chr4:11407835-11412159 REVERSE LENGTH=928
Length = 927
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 112/191 (58%), Gaps = 13/191 (6%)
Query: 364 DVTRDLPNGLMRISPGSSEPAASLPSPVTTKVGVDIPVPTQRCYRSKNAEPMPVGPVKVV 423
++TR LPNG+M ISP S +++ SP KVG + +R +RSKN EP+P+G ++VV
Sbjct: 152 ELTRVLPNGIMAISPPSP-TTSNVSSPCDVKVGEEPISMIKRRFRSKNIEPLPIGKMQVV 210
Query: 424 PRAMGM---SKAGQKTCHRCGMKKAARIVQCKNCDNRYFCNSCINKWYSGLSKKDIKTRC 480
P + K + CH CG + ++ C +C+ +FC CI K G SK++++ +C
Sbjct: 211 PFKGDLVNGRKEKKMRCHWCGTRGFGDLISCLSCEREFFCIDCIEKRNKG-SKEEVEKKC 269
Query: 481 PVCRGSCGCKQCTL---GQTKGAISKESSGDQDKLISIKICNHQLYKLLPV--ELNQEQL 535
PVCRGSC CK C++ G T+ S+ D D+++ + ++ + LLPV E+N E
Sbjct: 270 PVCRGSCRCKVCSVTNSGVTECKDSQSVRSDIDRVLHL---HYAVCMLLPVLKEINAEHK 326
Query: 536 DELEIEAKIQE 546
E+E +A+ +E
Sbjct: 327 VEVENDAEKKE 337
>AT3G07610.3 | chr3:2426148-2432876 FORWARD LENGTH=1050
Length = 1049
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 116/219 (52%), Gaps = 21/219 (9%)
Query: 422 VVPRAMGMSKAGQKTCHRCGMKKAARIVQ-CKNCDNRYFCNSCINKWYSGLSKKDIKTRC 480
V PR +G CH+C +K+ RIV+ C+ C+++ +C+ C++ WY ++K+D+ +C
Sbjct: 142 VDPRIIGYRP--DNMCHQC--QKSDRIVERCQTCNSKRYCHPCLDTWYPLIAKEDVAKKC 197
Query: 481 PVCRGSCGCKQCTLGQT--KGAISKESSGDQDKLISIKICNHQLYKLLPVE--LNQEQLD 536
C +C C+ C T KG S +++K+ + K L LLP +N EQ+
Sbjct: 198 MFCSSTCNCRACLRLDTKLKGINSNLIVSEEEKVQASKFI---LQSLLPHLKGINDEQVA 254
Query: 537 ELEIEAKIQETKISDVRVQVA----DEQSGSLDCNNCKLSVHRFLRSCPRCPFKLCLSCC 592
E E+EAKI K +VR Q A DE+ L C+ CK S++ R+C C F +CLSCC
Sbjct: 255 EKEVEAKIYGLKFEEVRPQDAKAFPDER---LYCDICKTSIYDLHRNCKSCSFDICLSCC 311
Query: 593 QKIRDGNISAATPEDKFN--QRLLQQESAHEDGSISCPS 629
+IR+G A + +N R L+ E E I P+
Sbjct: 312 LEIRNGKALACKEDVSWNYINRGLEYEHGQEGKVIEKPA 350
>AT4G00990.1 | chr4:427035-431535 FORWARD LENGTH=841
Length = 840
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 30/250 (12%)
Query: 436 TCHRCG-MKKAARIVQCKNCDNRYFCNSCINKWYSGLSKKDIKTRCPVCRGSCGCKQCTL 494
TCH C + + ++ C C+ + +C CI + YS + ++++ CP C +C C+ C
Sbjct: 79 TCHHCKILTSESDLIFCSKCNKKCYCFDCIKRSYSERTHEEVRAACPFCMMTCICRACL- 137
Query: 495 GQTKGAISKESSGDQDKLISIKICNHQLYKLLPV--ELNQEQLDELEIEAKIQETKISDV 552
+ I S D D + +K + L K+LPV ++ EQ ELEIE+ I+ +++
Sbjct: 138 -RLPLVIKPPSEKDTD--VKLKQLQYLLVKVLPVLKDIYTEQNRELEIESTIRGHPVTEA 194
Query: 553 RVQVAD-EQSGSLDCNNCKLSVHRFLRSCP--RCPFKLCLSCCQKI-------RDGNISA 602
++ + S + C+ C+ S+ F RSCP C +CLSCC+++ RDG +A
Sbjct: 195 NIKRCKLDPSERIYCDLCRTSIANFHRSCPNKNCSVDICLSCCKELSEGFHQERDGKKNA 254
Query: 603 -------------ATPEDKFNQRLLQQESAHEDGSISCPSIELGGCGDSLLNLVYVPPSD 649
D + + D SI CP E GGCG S L L + D
Sbjct: 255 EGKGYECRIPAGQGKDSDAYVPLHFSTWKLNSDSSIPCPPKECGGCGTSTLELRRLWKRD 314
Query: 650 QSEEVSSGDE 659
E++ + E
Sbjct: 315 WVEKLITNAE 324
>AT2G22840.1 | chr2:9728841-9731141 FORWARD LENGTH=531
Length = 530
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 287 PDHLRCRRSDGKKWRCQNRALPTVSFCEYHYSRANKGKKPPADGE 331
P+ RCRR+DGKKWRC A+P +CE H +R + P +G+
Sbjct: 197 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEGQ 241
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.132 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,190,642
Number of extensions: 426701
Number of successful extensions: 1159
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1151
Number of HSP's successfully gapped: 11
Length of query: 693
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 588
Effective length of database: 8,227,889
Effective search space: 4837998732
Effective search space used: 4837998732
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 115 (48.9 bits)