BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0557400 Os07g0557400|AK065096
(276 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G05120.1 | chr4:2632886-2634824 REVERSE LENGTH=419 276 7e-75
AT3G09990.1 | chr3:3072662-3075142 REVERSE LENGTH=418 263 1e-70
AT4G05140.1 | chr4:2651015-2653208 REVERSE LENGTH=420 253 8e-68
AT4G05110.1 | chr4:2626516-2628685 REVERSE LENGTH=419 251 2e-67
AT4G05130.1 | chr4:2636875-2638965 REVERSE LENGTH=419 247 4e-66
AT1G61630.1 | chr1:22744207-22746111 FORWARD LENGTH=418 226 7e-60
AT1G70330.1 | chr1:26502920-26504360 FORWARD LENGTH=451 74 1e-13
AT1G02630.1 | chr1:561007-562382 REVERSE LENGTH=390 53 2e-07
>AT4G05120.1 | chr4:2632886-2634824 REVERSE LENGTH=419
Length = 418
Score = 276 bits (707), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 136/247 (55%), Positives = 174/247 (70%), Gaps = 3/247 (1%)
Query: 30 KTKGKNWGIFICWXXXXXXXXXXXXMVTIEDYYVYLFPNYHPTRMITLVYQPFVLTTTAL 89
K +GK + +C M+TI DYY +FP+YHP+R++TLVYQPF L T +
Sbjct: 12 KLQGKYQAMVVCCILGIGSLVSWNSMLTIADYYYKVFPDYHPSRVLTLVYQPFALGTILI 71
Query: 90 FAYHEAKINTRMRNLARYMLFFLSSFGVIVLDVASSGRGGIAPFVGLCLIAAAFGVADGH 149
AYHE+KINTR RNL Y+LF +S+F +IVLD+A+ GRGGI P++GLC + A+FG+AD
Sbjct: 72 LAYHESKINTRKRNLIGYILFTISTFLLIVLDLATKGRGGIGPYIGLCAVVASFGLADAT 131
Query: 150 VQGGMTGDLSLMCPEFIQXXXXXXXXXXXXTSALRFLTKAIFENSKDGLRKGAMMFSSIA 209
VQGGM GDLSLMCPE +Q TSALR +TKA FE + DG RKGAMMF +I+
Sbjct: 132 VQGGMIGDLSLMCPELVQSFMGGLAVSGALTSALRLITKAAFEKTNDGPRKGAMMFLAIS 191
Query: 210 CFFELLCVILYAFVFPKLPIMKFYRTKAASEGSLTVTADLAAGGIKSQPENPLDEEDQAF 269
ELLCV LYA+VFPKLPI+K+YR KAASEGS TV+ADLAA GI++Q + +D +
Sbjct: 192 TCIELLCVFLYAYVFPKLPIVKYYRRKAASEGSKTVSADLAAAGIQNQSD---LTDDDSK 248
Query: 270 AERLSNR 276
+RLSN+
Sbjct: 249 NQRLSNK 255
>AT3G09990.1 | chr3:3072662-3075142 REVERSE LENGTH=418
Length = 417
Score = 263 bits (671), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 169/244 (69%), Gaps = 1/244 (0%)
Query: 32 KGKNWGIFICWXXXXXXXXXXXXMVTIEDYYVYLFPNYHPTRMITLVYQPFVLTTTALFA 91
KGKN+ + +CW M+TI DYY YLFP YHP+R++T++YQ F + ++
Sbjct: 13 KGKNYALAVCWLLGVGCLLAWNSMLTIVDYYAYLFPWYHPSRILTIIYQSFSIGALSVLV 72
Query: 92 YHEAKINTRMRNLARYMLFFLSSFGVIVLDVASSGRGGIAPFVGLCLIAAAFGVADGHVQ 151
+ EA++NTR RNL Y LF L S V+VL++A+SGRGGI F+G+C+I+AAFG+AD HV
Sbjct: 73 HKEARLNTRRRNLFGYSLFSLGSLAVLVLNLATSGRGGIGSFIGVCVISAAFGLADAHVY 132
Query: 152 GGMTGDLSLMCPEFIQXXXXXXXXXXXXTSALRFLTKAIFENSKDGLRKGAMMFSSIACF 211
GGM GDLS+M PEF+Q TS LR + KA F+NS+DGLRKGA +F +++
Sbjct: 133 GGMIGDLSMMTPEFLQSFLAGLAASGALTSGLRLVIKAAFKNSRDGLRKGATLFFAMSAS 192
Query: 212 FELLCVILYAFVFPKLPIMKFYRTKAASEGSLTVTADLAAGGIKSQPENPLDEEDQAFAE 271
FEL+CV+LYA+VFP++P++K+YR KA +GS TV ADLAAGGI+ QP DEE +
Sbjct: 193 FELVCVLLYAYVFPRIPVVKYYRAKAIIQGSRTVWADLAAGGIQVQPITQ-DEEALRYDH 251
Query: 272 RLSN 275
RL+
Sbjct: 252 RLNK 255
>AT4G05140.1 | chr4:2651015-2653208 REVERSE LENGTH=420
Length = 419
Score = 253 bits (646), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 167/244 (68%), Gaps = 2/244 (0%)
Query: 33 GKNWGIFICWXXXXXXXXXXXXMVTIEDYYVYLFPNYHPTRMITLVYQPFVLTTTALFAY 92
GK + +C ++++ DYY +FP+YHP+R++T VYQPF + T +FAY
Sbjct: 15 GKYQAMVVCCILGIGSLVSWNSLLSVGDYYYQVFPDYHPSRVLTFVYQPFSIGTIVIFAY 74
Query: 93 HEAKINTRMRNLARYMLFFLSSFGVIVLDVASSGRGGIAPFVGLCLIAAAFGVADGHVQG 152
+E+KINTR RNL Y++F S F +I+LD+A+ G GGI P++ LC I +FG AD V+G
Sbjct: 75 NESKINTRKRNLIGYIVFTTSIFLLIILDLATKGHGGIGPYIVLCAIVGSFGFADASVRG 134
Query: 153 GMTGDLSLMCPEFIQXXXXXXXXXXXXTSALRFLTKAIFENSKDGLRKGAMMFSSIACFF 212
GM GDLSLMCPE IQ TSA R +TKA FE + DGLRKGAM+F +I+
Sbjct: 135 GMIGDLSLMCPELIQSFVAGLAVAGALTSAFRLITKAAFEKTHDGLRKGAMIFLAISTLV 194
Query: 213 ELLCVILYAFVFPKLPIMKFYRTKAASEGSLTVTADLAAGGIKSQPENPLDEEDQAFAER 272
E LCV+LYA+VFPKLPI+K+YR+KAASEGS TV ADLAA GI++Q + L +D + +R
Sbjct: 195 EFLCVLLYAYVFPKLPIVKYYRSKAASEGSKTVYADLAAAGIQNQ--SVLTADDVSKDKR 252
Query: 273 LSNR 276
L+N+
Sbjct: 253 LNNK 256
>AT4G05110.1 | chr4:2626516-2628685 REVERSE LENGTH=419
Length = 418
Score = 251 bits (642), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/222 (54%), Positives = 159/222 (71%), Gaps = 3/222 (1%)
Query: 55 MVTIEDYYVYLFPNYHPTRMITLVYQPFVLTTTALFAYHEAKINTRMRNLARYMLFFLSS 114
M+T DYY +FP+YHP+R++TLVYQPF + AYHE+K +TR RNL Y+L+ +S+
Sbjct: 37 MLTTADYYYKVFPDYHPSRVLTLVYQPFAFGAIVILAYHESKTSTRKRNLIGYILYTIST 96
Query: 115 FGVIVLDVASSGRGGIAPFVGLCLIAAAFGVADGHVQGGMTGDLSLMCPEFIQXXXXXXX 174
F +IVLD+A+ GRGG P+ GLC + AAFG+AD VQGGM GDLSLMCPE +Q
Sbjct: 97 FLLIVLDLATKGRGGFGPYTGLCAVVAAFGLADATVQGGMFGDLSLMCPELVQSYMGGMA 156
Query: 175 XXXXXTSALRFLTKAIFENSKDGLRKGAMMFSSIACFFELLCVILYAFVFPKLPIMKFYR 234
TSALR +TKA FE S +GLRKGAMMF +I+ ELL V+LYA+V PKLPI+ +YR
Sbjct: 157 VAGALTSALRLITKAAFEKSNNGLRKGAMMFLAISTCIELLSVMLYAYVLPKLPIVMYYR 216
Query: 235 TKAASEGSLTVTADLAAGGIKSQPENPLDEEDQAFAERLSNR 276
KAAS+GS TV+ADLAA GI++Q + +D + +RLS +
Sbjct: 217 RKAASQGSKTVSADLAAAGIQNQSD---LSDDDSKNQRLSKK 255
>AT4G05130.1 | chr4:2636875-2638965 REVERSE LENGTH=419
Length = 418
Score = 247 bits (631), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/249 (48%), Positives = 161/249 (64%)
Query: 24 DDHGLAKTKGKNWGIFICWXXXXXXXXXXXXMVTIEDYYVYLFPNYHPTRMITLVYQPFV 83
++H +GK + +C M+TI DYY +FP+YHP+R+ TL+YQP
Sbjct: 6 ENHAPENLQGKYQAMVVCCILGIGSLFSWNSMLTIADYYYQVFPDYHPSRVFTLIYQPIA 65
Query: 84 LTTTALFAYHEAKINTRMRNLARYMLFFLSSFGVIVLDVASSGRGGIAPFVGLCLIAAAF 143
L T + AY E+KI+TR R L Y+LF +S+F +IVLD+ + G GGI ++ LC I A+F
Sbjct: 66 LGTIMILAYRESKISTRKRILTGYILFTISTFLLIVLDLTTKGHGGIGHYIVLCTIVASF 125
Query: 144 GVADGHVQGGMTGDLSLMCPEFIQXXXXXXXXXXXXTSALRFLTKAIFENSKDGLRKGAM 203
G+AD V+GG+ GDLSLMCPE IQ TS LR +TKA FE S + LRKGAM
Sbjct: 126 GLADATVKGGLVGDLSLMCPELIQSYMAGSGMAGALTSVLRLITKAAFEKSNNSLRKGAM 185
Query: 204 MFSSIACFFELLCVILYAFVFPKLPIMKFYRTKAASEGSLTVTADLAAGGIKSQPENPLD 263
+F +I+ F ELLCVILYA+VFPKLPI+K+YR KAASEGS TV ADLAA GI++ + D
Sbjct: 186 IFLAISTFIELLCVILYAYVFPKLPIVKYYRRKAASEGSKTVVADLAAAGIQNLSDLSDD 245
Query: 264 EEDQAFAER 272
+ +
Sbjct: 246 DSKNQMLRK 254
>AT1G61630.1 | chr1:22744207-22746111 FORWARD LENGTH=418
Length = 417
Score = 226 bits (577), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 154/248 (62%), Gaps = 1/248 (0%)
Query: 29 AKTKGKNWGIFICWXXXXXXXXXXXXMVTIEDYYVYLFPNYHPTRMITLVYQPFVLTTTA 88
++ +GKN +C M+TI DYY LFP YHP+R++T+VYQ
Sbjct: 9 SRIEGKNVARLVCCFLGVGSLVAWNAMLTITDYYYQLFPKYHPSRVLTIVYQLVANVFII 68
Query: 89 LFAYHEAKINTRMRNLARYMLFFLSSFGVIVLDVASSGRGGIAPFVGLCLIAAAFGVADG 148
A EAK+NTR+RN+ Y L+ +F +I+LD+AS G G + +V LCLI A FG+AD
Sbjct: 69 TLATKEAKLNTRLRNIFGYSLYTAGTFCLIILDLASHGSGSVVAYVLLCLIVALFGLADA 128
Query: 149 HVQGGMTGDLSLMCPEFIQXXXXXXXXXXXXTSALRFLTKAIFENSKDGLRKGAMMFSSI 208
VQG M GDLS M P+FIQ TS LR +TKAIF+NS DGLRKGA++F I
Sbjct: 129 FVQGAMVGDLSFMSPDFIQAFMAGLGIAGALTSVLRLITKAIFDNSPDGLRKGALLFIGI 188
Query: 209 ACFFELLCVILYAFVFPKLPIMKFYRTKAASEGSLTVTADLAAGGIKSQPENPLDEEDQA 268
A EL CV LY VF KLPI+K+YR KA EG+ TV+ADLAA G++ Q E + + D++
Sbjct: 189 ATLIELACVFLYTLVFAKLPIVKYYRAKAGKEGAKTVSADLAAAGLQEQAEQ-VHQMDES 247
Query: 269 FAERLSNR 276
++L+ +
Sbjct: 248 KIQKLTKK 255
>AT1G70330.1 | chr1:26502920-26504360 FORWARD LENGTH=451
Length = 450
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 56 VTIEDYYVYLFPNYHPTRMITLVYQPFVLT---TTALFAYHEAKINTRMRNLARYMLFFL 112
+T DY+ YL+P+ R+ ++Y L +F H++ + R+ NL +L F+
Sbjct: 83 ITAVDYFSYLYPSTAVDRIFAVIYMLVALVCLFVIVVFYAHKSLASFRI-NLG--LLLFV 139
Query: 113 SSFGVIVLDVASSGRGGIAPFVGLCLIAAAF---GVADGHVQGGMTGDLSLMCPEFIQXX 169
+ V+ + +G + + G + +AA G+ D +QGG+ G M ++Q
Sbjct: 140 IALLVVPVLDLVYVKGQVGLYAGFDVTSAAVALSGLGDALMQGGLIGVAGEMPERYMQAV 199
Query: 170 XXXXXXXXXXTSALRFLTKAIFENSKDGLRKGAMMFSSIACFFELLCVILYAFVFPKLPI 229
S LR LTKA++ DGLRK A ++ ++ ++C + Y V KLP+
Sbjct: 200 VAGTAGSGVLVSLLRILTKAVYPQDPDGLRKSANLYFAVGIVVMVICAVFYN-VAHKLPV 258
Query: 230 MKFY---------RTKAASEGSLT 244
+KF+ R K+ +GSLT
Sbjct: 259 IKFHEERKNEELIREKSEEKGSLT 282
>AT1G02630.1 | chr1:561007-562382 REVERSE LENGTH=390
Length = 389
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 14/184 (7%)
Query: 55 MVTIEDYYVYLFPNYHPTRMITLVYQPFVLTTTALFAYHEAKINTRMRNLARYMLFFLSS 114
++T DY+ YL+P+ H + T+ Y + L +++ R+R + +F ++
Sbjct: 38 LITAVDYFGYLYPDKHVEKTFTVAYMSCSVLVLVLMMTWNTRMSYRVRMNLGFSMFIIAM 97
Query: 115 FGVIVLDVASSGRGG-------IAPFVGLCLIAAAFGVADGHVQGGMTGDLSLMCPEFIQ 167
++D G G + V LC G+ADG V G + G + +++Q
Sbjct: 98 MISPLIDWVWKGEKGENVSYMLMVGSVVLC------GLADGVVGGSLIGSAGKLPRQYMQ 151
Query: 168 XXXXXXXXXXXXTSALRFLTKAIFENSKDGLRKGAMMFSSIACFFELLCVILYAFVFPKL 227
S LR TKA + G+R A + ++ LLC + V KL
Sbjct: 152 AIFAGTASSGIIISLLRIATKASLPQTPQGMRTSAHSYFIVSSTI-LLCCFISCNVLHKL 210
Query: 228 PIMK 231
P+M+
Sbjct: 211 PVMQ 214
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,275,504
Number of extensions: 185088
Number of successful extensions: 487
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 484
Number of HSP's successfully gapped: 8
Length of query: 276
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 179
Effective length of database: 8,447,217
Effective search space: 1512051843
Effective search space used: 1512051843
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 111 (47.4 bits)